RNA–Protein interactions for RNA: ENST00000589867.2

MBD1-221, Transcript of methyl-CpG binding domain protein 1, human

TSL 3

Gene MBD1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MBD1-221	ENST00000589867	TLR5	O60602	858 aa		18.24	■□□□□ 0.51
MBD1-221	ENST00000589867	CHRNB1	P11230	501 aa		18.24	■□□□□ 0.51
MBD1-221	ENST00000589867	TRIM21	P19474	475 aa	Known RBP	18.24	■□□□□ 0.51
MBD1-221	ENST00000589867	BCAT1	P54687	386 aa		18.24	■□□□□ 0.51
MBD1-221	ENST00000589867	GAS6	Q14393	721 aa		18.24	■□□□□ 0.51
MBD1-221	ENST00000589867	KCNJ12	Q14500	433 aa		18.24	■□□□□ 0.51
MBD1-221	ENST00000589867	CNGA2	Q16280	664 aa		18.24	■□□□□ 0.51
MBD1-221	ENST00000589867	EXOC3L4	Q17RC7	722 aa		18.24	■□□□□ 0.51
MBD1-221	ENST00000589867	ITPRIPL2	Q3MIP1	535 aa		18.24	■□□□□ 0.51
MBD1-221	ENST00000589867	TCP11X2	Q5H9J9	407 aa		18.24	■□□□□ 0.51
MBD1-221	ENST00000589867	CSGALNACT1	Q8TDX6	532 aa		18.24	■□□□□ 0.51
MBD1-221	ENST00000589867	SLC35F5	Q8WV83	523 aa		18.24	■□□□□ 0.51
MBD1-221	ENST00000589867	FAM3C	Q92520	227 aa		18.24	■□□□□ 0.51
MBD1-221	ENST00000589867	PHOX2B	Q99453	314 aa		18.24	■□□□□ 0.51
MBD1-221	ENST00000589867	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	18.24	■□□□□ 0.51
MBD1-221	ENST00000589867	KIAA1257	Q9ULG3	409 aa		18.24	■□□□□ 0.51
MBD1-221	ENST00000589867	NDRG2	Q9UN36	371 aa	Known RBP	18.24	■□□□□ 0.51
MBD1-221	ENST00000589867	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	18.24	■□□□□ 0.51
MBD1-221	ENST00000589867		H0Y858	1186 aa		18.23	■□□□□ 0.51
MBD1-221	ENST00000589867	MBL2	P11226	248 aa	Predicted RBP	18.23	■□□□□ 0.51
MBD1-221	ENST00000589867	PLA2G4A	P47712	749 aa		18.23	■□□□□ 0.51
MBD1-221	ENST00000589867	PDE6C	P51160	858 aa		18.23	■□□□□ 0.51
MBD1-221	ENST00000589867	KPNA1	P52294	538 aa	Predicted RBP	18.23	■□□□□ 0.51
MBD1-221	ENST00000589867	BST2	Q10589	180 aa	Known RBP	18.23	■□□□□ 0.51
MBD1-221	ENST00000589867	PDGFRL	Q15198	375 aa		18.23	■□□□□ 0.51
MBD1-221	ENST00000589867	PM20D1	Q6GTS8	502 aa		18.23	■□□□□ 0.51
MBD1-221	ENST00000589867	RALGPS2	Q86X27	583 aa	Predicted RBP	18.23	■□□□□ 0.51
MBD1-221	ENST00000589867	FAM114A1	Q8IWE2	563 aa		18.23	■□□□□ 0.51
MBD1-221	ENST00000589867	NELL2	Q99435	816 aa		18.23	■□□□□ 0.51
MBD1-221	ENST00000589867	KLF16	Q9BXK1	252 aa	Predicted RBP	18.23	■□□□□ 0.51
MBD1-221	ENST00000589867	ECT2	Q9H8V3	914 aa		18.23	■□□□□ 0.51
MBD1-221	ENST00000589867	FBRSL1	Q9HCM7	1045 aa	Known RBP	18.23	■□□□□ 0.51
MBD1-221	ENST00000589867	TLR8	Q9NR97	1041 aa	Known RBP	18.23	■□□□□ 0.51
MBD1-221	ENST00000589867	DUS2	Q9NX74	493 aa	Known RBP	18.23	■□□□□ 0.51
MBD1-221	ENST00000589867	CFAP97	Q9P2B7	532 aa		18.23	■□□□□ 0.51
MBD1-221	ENST00000589867	APEX2	Q9UBZ4	518 aa		18.23	■□□□□ 0.51
MBD1-221	ENST00000589867	NUDT5	Q9UKK9	219 aa		18.23	■□□□□ 0.51
MBD1-221	ENST00000589867	USP34	Q70CQ2	3546 aa		18.22	■□□□□ 0.51
MBD1-221	ENST00000589867	MDM4	O15151	490 aa		18.22	■□□□□ 0.51
MBD1-221	ENST00000589867	RFX1	P22670	979 aa		18.22	■□□□□ 0.51
MBD1-221	ENST00000589867	GJA4	P35212	333 aa		18.22	■□□□□ 0.51
MBD1-221	ENST00000589867	TYRO3	Q06418	890 aa		18.22	■□□□□ 0.51
MBD1-221	ENST00000589867	STX1A	Q16623	288 aa		18.22	■□□□□ 0.51
MBD1-221	ENST00000589867	PMF1	Q6P1K2	205 aa		18.22	■□□□□ 0.51
MBD1-221	ENST00000589867	ZNF276	Q8N554	614 aa		18.22	■□□□□ 0.51
MBD1-221	ENST00000589867	KIAA1958	Q8N8K9	716 aa		18.22	■□□□□ 0.51
MBD1-221	ENST00000589867	TTC16	Q8NEE8	873 aa		18.22	■□□□□ 0.51
MBD1-221	ENST00000589867	SHC3	Q92529	594 aa		18.22	■□□□□ 0.51
MBD1-221	ENST00000589867	MSANTD3	Q96H12	275 aa		18.22	■□□□□ 0.51
MBD1-221	ENST00000589867	PRRX2	Q99811	253 aa		18.22	■□□□□ 0.51
MBD1-221	ENST00000589867	ULBP1	Q9BZM6	244 aa		18.22	■□□□□ 0.51
MBD1-221	ENST00000589867	DNAI2	Q9GZS0	605 aa		18.22	■□□□□ 0.51
MBD1-221	ENST00000589867	RBM12	Q9NTZ6	932 aa	Known RBP	18.22	■□□□□ 0.51
MBD1-221	ENST00000589867	ANO10	Q9NW15	660 aa		18.22	■□□□□ 0.51
MBD1-221	ENST00000589867	FANCL	Q9NW38	375 aa		18.22	■□□□□ 0.51
MBD1-221	ENST00000589867	TAB2	Q9NYJ8	693 aa		18.22	■□□□□ 0.51
MBD1-221	ENST00000589867	FANCM	Q8IYD8	2048 aa		18.22	■□□□□ 0.51
MBD1-221	ENST00000589867	WDR87	Q6ZQQ6	2873 aa		18.21	■□□□□ 0.51
MBD1-221	ENST00000589867	RARG	P13631	454 aa		18.21	■□□□□ 0.51
MBD1-221	ENST00000589867	PRKCSH	P14314	528 aa	Predicted RBP	18.21	■□□□□ 0.51
MBD1-221	ENST00000589867	ZNF18	P17022	549 aa		18.21	■□□□□ 0.51
MBD1-221	ENST00000589867	EEF1G	P26641	437 aa	Known RBP	18.21	■□□□□ 0.51
MBD1-221	ENST00000589867	PLA2G5	P39877	138 aa		18.21	■□□□□ 0.51
MBD1-221	ENST00000589867	RPS9	P46781	194 aa	Known RBP	18.21	■□□□□ 0.51
MBD1-221	ENST00000589867	TKTL1	P51854	596 aa		18.21	■□□□□ 0.51
MBD1-221	ENST00000589867	PTPN5	P54829	565 aa		18.21	■□□□□ 0.51
MBD1-221	ENST00000589867	PON2	Q15165	354 aa		18.21	■□□□□ 0.51
MBD1-221	ENST00000589867	KRT31	Q15323	416 aa		18.21	■□□□□ 0.51
MBD1-221	ENST00000589867	CC2D1A	Q6P1N0	951 aa	Predicted RBP	18.21	■□□□□ 0.51
MBD1-221	ENST00000589867	SASS6	Q6UVJ0	657 aa		18.21	■□□□□ 0.51
MBD1-221	ENST00000589867	APTX	Q7Z2E3	356 aa	Known RBP	18.21	■□□□□ 0.51
MBD1-221	ENST00000589867	ADGRG2	Q8IZP9	1017 aa		18.21	■□□□□ 0.51
MBD1-221	ENST00000589867	KCTD13	Q8WZ19	329 aa		18.21	■□□□□ 0.51
MBD1-221	ENST00000589867	EZH1	Q92800	747 aa	Predicted RBP	18.21	■□□□□ 0.51
MBD1-221	ENST00000589867	SECISBP2L	Q93073	1101 aa	Known RBP	18.21	■□□□□ 0.51
MBD1-221	ENST00000589867	FUCA2	Q9BTY2	467 aa		18.21	■□□□□ 0.51
MBD1-221	ENST00000589867	CHRD	Q9H2X0	955 aa		18.21	■□□□□ 0.51
MBD1-221	ENST00000589867	LMAN1L	Q9HAT1	526 aa		18.21	■□□□□ 0.51
MBD1-221	ENST00000589867	CYP17A1	P05093	508 aa		18.2	■□□□□ 0.5
MBD1-221	ENST00000589867	PNMA6A	P0CW24	399 aa	Predicted RBP	18.2	■□□□□ 0.5
MBD1-221	ENST00000589867	SETSIP	P0DME0	302 aa		18.2	■□□□□ 0.5
MBD1-221	ENST00000589867	GPD2	P43304	727 aa		18.2	■□□□□ 0.5
MBD1-221	ENST00000589867	IFNAR2	P48551	515 aa		18.2	■□□□□ 0.5
MBD1-221	ENST00000589867	RPL34	P49207	117 aa	Known RBP	18.2	■□□□□ 0.5
MBD1-221	ENST00000589867	CCIN	Q13939	588 aa		18.2	■□□□□ 0.5
MBD1-221	ENST00000589867	ANGPT1	Q15389	498 aa		18.2	■□□□□ 0.5
MBD1-221	ENST00000589867	ARHGAP44	Q17R89	818 aa		18.2	■□□□□ 0.5
MBD1-221	ENST00000589867	TMEM196	Q5HYL7	178 aa		18.2	■□□□□ 0.5
MBD1-221	ENST00000589867	FSTL4	Q6MZW2	842 aa		18.2	■□□□□ 0.5
MBD1-221	ENST00000589867	CAVIN1	Q6NZI2	390 aa	Known RBP	18.2	■□□□□ 0.5
MBD1-221	ENST00000589867	DENND1B	Q6P3S1	775 aa		18.2	■□□□□ 0.5
MBD1-221	ENST00000589867	KLHDC10	Q6PID8	442 aa		18.2	■□□□□ 0.5
MBD1-221	ENST00000589867	ENOSF1	Q7L5Y1	443 aa		18.2	■□□□□ 0.5
MBD1-221	ENST00000589867	C1orf210	Q8IVY1	113 aa		18.2	■□□□□ 0.5
MBD1-221	ENST00000589867	P2RY11	Q96G91	374 aa		18.2	■□□□□ 0.5
MBD1-221	ENST00000589867	NAA15	Q9BXJ9	866 aa	Known RBP	18.2	■□□□□ 0.5
MBD1-221	ENST00000589867	FAM86C1	Q9NVL1	165 aa		18.2	■□□□□ 0.5
MBD1-221	ENST00000589867	C2orf42	Q9NWW7	574 aa		18.2	■□□□□ 0.5
MBD1-221	ENST00000589867	CLIC5	Q9NZA1	410 aa		18.2	■□□□□ 0.5
MBD1-221	ENST00000589867	HESX1	Q9UBX0	185 aa		18.2	■□□□□ 0.5

Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms