RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 TRPC7Q9HCX4 862 aa10.98□□□□□ -0.65
SDF2-208ENST00000589788 TRPM5Q9NZQ8 1165 aa10.98□□□□□ -0.65
SDF2-208ENST00000589788 TRAV19A0A0A6YYK7 116 aa10.97□□□□□ -0.65
SDF2-208ENST00000589788 ZNF263O14978 683 aa10.97□□□□□ -0.65
SDF2-208ENST00000589788 ABL1P00519 1130 aa10.97□□□□□ -0.65
SDF2-208ENST00000589788 YWHAQP27348 245 aa10.97□□□□□ -0.65
SDF2-208ENST00000589788 MTIF2P46199 727 aaKnown RBP10.97□□□□□ -0.65
SDF2-208ENST00000589788 PPP3CCP48454 512 aa10.97□□□□□ -0.65
SDF2-208ENST00000589788 PDE6CP51160 858 aa10.97□□□□□ -0.65
SDF2-208ENST00000589788 EPHA4P54764 986 aa10.97□□□□□ -0.65
SDF2-208ENST00000589788 GDF10P55107 478 aa10.97□□□□□ -0.65
SDF2-208ENST00000589788 ZNF445P59923 1031 aa10.97□□□□□ -0.65
SDF2-208ENST00000589788 NNTQ13423 1086 aa10.97□□□□□ -0.65
SDF2-208ENST00000589788 SLC44A4Q53GD3 710 aa10.97□□□□□ -0.65
SDF2-208ENST00000589788 PAQR9Q6ZVX9 377 aa10.97□□□□□ -0.65
SDF2-208ENST00000589788 SND1Q7KZF4 910 aaKnown RBP eCLIP10.97□□□□□ -0.655e-8■■■■□ 20.1
SDF2-208ENST00000589788 MFSD6LQ8IWD5 586 aa10.97□□□□□ -0.65
SDF2-208ENST00000589788 PPM1KQ8N3J5 372 aa10.97□□□□□ -0.65
SDF2-208ENST00000589788 CELF5Q8N6W0 485 aaKnown RBP10.97□□□□□ -0.65
SDF2-208ENST00000589788 WHAMMQ8TF30 809 aa10.97□□□□□ -0.65
SDF2-208ENST00000589788 TMEM176AQ96HP8 235 aa10.97□□□□□ -0.65
SDF2-208ENST00000589788 CNOT6LQ96LI5 555 aaKnown RBP10.97□□□□□ -0.65
SDF2-208ENST00000589788 KCNK16Q96T55 309 aa10.97□□□□□ -0.65
SDF2-208ENST00000589788 HNRNPABQ99729 332 aaKnown RBP10.97□□□□□ -0.65
SDF2-208ENST00000589788 TTLL2Q9BWV7 592 aa10.97□□□□□ -0.65
SDF2-208ENST00000589788 THAP9Q9H5L6 903 aa10.97□□□□□ -0.65
SDF2-208ENST00000589788 TMEM30AQ9NV96 361 aa10.97□□□□□ -0.65
SDF2-208ENST00000589788 OBP2AQ9NY56 170 aa10.97□□□□□ -0.65
SDF2-208ENST00000589788 ANAPC1Q9H1A4 1944 aa10.96□□□□□ -0.65
SDF2-208ENST00000589788 ZDBF2Q9HCK1 2354 aa10.96□□□□□ -0.65
SDF2-208ENST00000589788 KRBA1A5PL33 1030 aa10.96□□□□□ -0.65
SDF2-208ENST00000589788 TADA3O75528 432 aa10.96□□□□□ -0.65
SDF2-208ENST00000589788 PRAMEF12O95522 483 aa10.96□□□□□ -0.65
SDF2-208ENST00000589788 CKMP06732 381 aa10.96□□□□□ -0.65
SDF2-208ENST00000589788 USP17L7P0C7H9 530 aa10.96□□□□□ -0.65
SDF2-208ENST00000589788 AVPR2P30518 371 aa10.96□□□□□ -0.65
SDF2-208ENST00000589788 CLCN5P51795 746 aa10.96□□□□□ -0.65
SDF2-208ENST00000589788 RAD23BP54727 409 aa10.96□□□□□ -0.65
SDF2-208ENST00000589788 MAP3K7CLP57077 242 aa10.96□□□□□ -0.65
SDF2-208ENST00000589788 FOXC1Q12948 553 aa10.96□□□□□ -0.65
SDF2-208ENST00000589788 TAF10Q12962 218 aa10.96□□□□□ -0.65
SDF2-208ENST00000589788 MLF2Q15773 248 aaPredicted RBP10.96□□□□□ -0.65
SDF2-208ENST00000589788 CT47A1Q5JQC4 288 aaPredicted RBP10.96□□□□□ -0.65
SDF2-208ENST00000589788 SASS6Q6UVJ0 657 aa10.96□□□□□ -0.65
SDF2-208ENST00000589788 SLC4A11Q8NBS3 891 aa10.96□□□□□ -0.65
SDF2-208ENST00000589788 TTC16Q8NEE8 873 aa10.96□□□□□ -0.65
SDF2-208ENST00000589788 PDZD8Q8NEN9 1154 aa10.96□□□□□ -0.65
SDF2-208ENST00000589788 BPIFB1Q8TDL5 484 aa10.96□□□□□ -0.65
SDF2-208ENST00000589788 CSGALNACT1Q8TDX6 532 aa10.96□□□□□ -0.65
SDF2-208ENST00000589788 DNASE1L2Q92874 299 aa10.96□□□□□ -0.65
SDF2-208ENST00000589788 FBXO32Q969P5 355 aa10.96□□□□□ -0.65
SDF2-208ENST00000589788 JAKMIP2Q96AA8 810 aa10.96□□□□□ -0.65
SDF2-208ENST00000589788 RSPRY1Q96DX4 576 aa10.96□□□□□ -0.65
SDF2-208ENST00000589788 MED15Q96RN5 788 aa10.96□□□□□ -0.65
SDF2-208ENST00000589788 SMOQ99835 787 aa10.96□□□□□ -0.65
SDF2-208ENST00000589788 FUCA2Q9BTY2 467 aa10.96□□□□□ -0.65
SDF2-208ENST00000589788 SMG9Q9H0W8 520 aaKnown RBP10.96□□□□□ -0.65
SDF2-208ENST00000589788 TBC1D17Q9HA65 648 aa10.96□□□□□ -0.65
SDF2-208ENST00000589788 KIF9Q9HAQ2 790 aa10.96□□□□□ -0.65
SDF2-208ENST00000589788 TDP1Q9NUW8 608 aa10.96□□□□□ -0.65
SDF2-208ENST00000589788 THG1LQ9NWX6 298 aaKnown RBP10.96□□□□□ -0.65
SDF2-208ENST00000589788 MUC3AQ02505 3323 aa10.96□□□□□ -0.66
SDF2-208ENST00000589788 C2orf78A6NCI8 922 aa10.95□□□□□ -0.66
SDF2-208ENST00000589788 CHADO15335 359 aa10.95□□□□□ -0.66
SDF2-208ENST00000589788 GDF9O60383 454 aa10.95□□□□□ -0.66
SDF2-208ENST00000589788 BEST1O76090 585 aa10.95□□□□□ -0.66
SDF2-208ENST00000589788 CD19P15391 556 aa10.95□□□□□ -0.66
SDF2-208ENST00000589788 PFKLP17858 780 aa10.95□□□□□ -0.66
SDF2-208ENST00000589788 HDCP19113 662 aa10.95□□□□□ -0.66
SDF2-208ENST00000589788 SERPINB4P48594 390 aa10.95□□□□□ -0.66
SDF2-208ENST00000589788 SLC5A3P53794 718 aa10.95□□□□□ -0.66
SDF2-208ENST00000589788 VCPP55072 806 aaKnown RBP10.95□□□□□ -0.66
SDF2-208ENST00000589788 SLC8A3P57103 927 aa10.95□□□□□ -0.66
SDF2-208ENST00000589788 PRKCQQ04759 706 aa10.95□□□□□ -0.66
SDF2-208ENST00000589788 FCHO2Q0JRZ9 810 aa10.95□□□□□ -0.66
SDF2-208ENST00000589788 ARHGAP29Q52LW3 1261 aa10.95□□□□□ -0.66
SDF2-208ENST00000589788 CC2D1AQ6P1N0 951 aaPredicted RBP10.95□□□□□ -0.66
SDF2-208ENST00000589788 LRSAM1Q6UWE0 723 aa10.95□□□□□ -0.66
SDF2-208ENST00000589788 TPRG1Q6ZUI0 275 aa10.95□□□□□ -0.66
SDF2-208ENST00000589788 CYP2U1Q7Z449 544 aa10.95□□□□□ -0.66
SDF2-208ENST00000589788 ARL14EPQ8N8R7 260 aaPredicted RBP10.95□□□□□ -0.66
SDF2-208ENST00000589788 KDF1Q8NAX2 398 aaPredicted RBP10.95□□□□□ -0.66
SDF2-208ENST00000589788 SCAMP5Q8TAC9 235 aa10.95□□□□□ -0.66
SDF2-208ENST00000589788 OVCA2Q8WZ82 227 aa10.95□□□□□ -0.66
SDF2-208ENST00000589788 USP13Q92995 863 aaPredicted RBP10.95□□□□□ -0.66
SDF2-208ENST00000589788 KLF16Q9BXK1 252 aaPredicted RBP10.95□□□□□ -0.66
SDF2-208ENST00000589788 INTS2Q9H0H0 1204 aaKnown RBP10.95□□□□□ -0.66
SDF2-208ENST00000589788 FBXO44Q9H4M3 255 aa10.95□□□□□ -0.66
SDF2-208ENST00000589788 CSNK1G1Q9HCP0 422 aa10.95□□□□□ -0.66
SDF2-208ENST00000589788 HEBP1Q9NRV9 189 aa10.95□□□□□ -0.66
SDF2-208ENST00000589788 COMMD8Q9NX08 183 aa10.95□□□□□ -0.66
SDF2-208ENST00000589788 GCNT4Q9P109 453 aa10.95□□□□□ -0.66
SDF2-208ENST00000589788 RAPGEFL1Q9UHV5 662 aa10.95□□□□□ -0.66
SDF2-208ENST00000589788 PCDHB4Q9Y5E5 795 aa10.95□□□□□ -0.66
SDF2-208ENST00000589788 TICRRQ7Z2Z1 1910 aa10.95□□□□□ -0.66
SDF2-208ENST00000589788 KMT2EQ8IZD2 1858 aa10.95□□□□□ -0.66
SDF2-208ENST00000589788 NCANO14594 1321 aa10.94□□□□□ -0.66
SDF2-208ENST00000589788 ZNF318Q5VUA4 2279 aa10.94□□□□□ -0.66
SDF2-208ENST00000589788 ZNF840PA6NDX5 716 aa10.94□□□□□ -0.66
SDF2-208ENST00000589788 TNFRSF10BO14763 440 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms