RNA–Protein interactions for RNA: ENST00000589709.1

VAT1-206, Transcript of vesicle amine transport 1, humanhuman

TSL 4

Gene VAT1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-206ENST00000589709 GCLMP48507 274 aa12.92□□□□□ -0.34
VAT1-206ENST00000589709 DGKEP52429 567 aa12.92□□□□□ -0.34
VAT1-206ENST00000589709 LIMK1P53667 647 aa12.92□□□□□ -0.34
VAT1-206ENST00000589709 MAP3K7CLP57077 242 aa12.92□□□□□ -0.34
VAT1-206ENST00000589709 GAD2Q05329 585 aa12.92□□□□□ -0.34
VAT1-206ENST00000589709 C2orf27AQ580R0 203 aa12.92□□□□□ -0.34
VAT1-206ENST00000589709 PLA2G2CQ5R387 149 aa12.92□□□□□ -0.34
VAT1-206ENST00000589709 LY6G5CQ5SRR4 150 aa12.92□□□□□ -0.34
VAT1-206ENST00000589709 C11orf74Q86VG3 221 aa12.92□□□□□ -0.34
VAT1-206ENST00000589709 KCNV2Q8TDN2 545 aa12.92□□□□□ -0.34
VAT1-206ENST00000589709 CYFIP2Q96F07 1278 aa12.92□□□□□ -0.34
VAT1-206ENST00000589709 TWNKQ96RR1 684 aa12.92□□□□□ -0.34
VAT1-206ENST00000589709 NT5C1AQ9BXI3 368 aa12.92□□□□□ -0.34
VAT1-206ENST00000589709 DNAI2Q9GZS0 605 aa12.92□□□□□ -0.34
VAT1-206ENST00000589709 NIF3L1Q9GZT8 377 aa12.92□□□□□ -0.34
VAT1-206ENST00000589709 DUSP15Q9H1R2 295 aaPredicted RBP12.92□□□□□ -0.34
VAT1-206ENST00000589709 GOLPH3LQ9H4A5 285 aa12.92□□□□□ -0.34
VAT1-206ENST00000589709 APOBEC3GQ9HC16 384 aaKnown RBP12.92□□□□□ -0.34
VAT1-206ENST00000589709 TMEM8AQ9HCN3 771 aa12.92□□□□□ -0.34
VAT1-206ENST00000589709 PNPLA8Q9NP80 782 aa12.92□□□□□ -0.34
VAT1-206ENST00000589709 CYLDQ9NQC7 956 aa12.92□□□□□ -0.34
VAT1-206ENST00000589709 TLR8Q9NR97 1041 aaKnown RBP12.92□□□□□ -0.34
VAT1-206ENST00000589709 HMGXB4Q9UGU5 601 aa12.92□□□□□ -0.34
VAT1-206ENST00000589709 MAPK8IP1Q9UQF2 711 aa12.92□□□□□ -0.34
VAT1-206ENST00000589709 SCML2Q9UQR0 700 aa12.92□□□□□ -0.34
VAT1-206ENST00000589709 SH3BP1Q9Y3L3 701 aa12.92□□□□□ -0.34
VAT1-206ENST00000589709 SPAG17Q6Q759 2223 aa12.92□□□□□ -0.34
VAT1-206ENST00000589709 HHLA1C9JL84 531 aa12.91□□□□□ -0.34
VAT1-206ENST00000589709 SCAMP3O14828 347 aaKnown RBP12.91□□□□□ -0.34
VAT1-206ENST00000589709 HOXC11O43248 304 aaPredicted RBP12.91□□□□□ -0.34
VAT1-206ENST00000589709 TLR5O60602 858 aa12.91□□□□□ -0.34
VAT1-206ENST00000589709 CILPO75339 1184 aa12.91□□□□□ -0.34
VAT1-206ENST00000589709 RHOBTB1O94844 696 aa12.91□□□□□ -0.34
VAT1-206ENST00000589709 APODP05090 189 aa12.91□□□□□ -0.34
VAT1-206ENST00000589709 TRIM49P0CI25 452 aa12.91□□□□□ -0.34
VAT1-206ENST00000589709 TRIM49CP0CI26 452 aa12.91□□□□□ -0.34
VAT1-206ENST00000589709 ORC1Q13415 861 aa12.91□□□□□ -0.34
VAT1-206ENST00000589709 ELF2Q15723 593 aa12.91□□□□□ -0.34
VAT1-206ENST00000589709 CRY1Q16526 586 aa12.91□□□□□ -0.34
VAT1-206ENST00000589709 PREPLQ4J6C6 727 aaPredicted RBP12.91□□□□□ -0.34
VAT1-206ENST00000589709 USP39Q53GS9 565 aaKnown RBP12.91□□□□□ -0.34
VAT1-206ENST00000589709 KRT39Q6A163 491 aa12.91□□□□□ -0.34
VAT1-206ENST00000589709 KLHDC10Q6PID8 442 aa12.91□□□□□ -0.34
VAT1-206ENST00000589709 CLEC20AQ6ZU45 233 aa12.91□□□□□ -0.34
VAT1-206ENST00000589709 HTR3DQ70Z44 454 aa12.91□□□□□ -0.34
VAT1-206ENST00000589709 ETFBKMTQ8IXQ9 262 aa12.91□□□□□ -0.34
VAT1-206ENST00000589709 PHTF2Q8N3S3 785 aa12.91□□□□□ -0.34
VAT1-206ENST00000589709 ZNF276Q8N554 614 aa12.91□□□□□ -0.34
VAT1-206ENST00000589709 TTC39CQ8N584 583 aa12.91□□□□□ -0.34
VAT1-206ENST00000589709 CCDC150Q8NCX0 1101 aa12.91□□□□□ -0.34
VAT1-206ENST00000589709 WHAMMQ8TF30 809 aa12.91□□□□□ -0.34
VAT1-206ENST00000589709 DDX1Q92499 740 aaKnown RBP12.91□□□□□ -0.34
VAT1-206ENST00000589709 CNOT6LQ96LI5 555 aaKnown RBP12.91□□□□□ -0.34
VAT1-206ENST00000589709 NACA2Q9H009 215 aa12.91□□□□□ -0.34
VAT1-206ENST00000589709 FAM124BQ9H5Z6 455 aaPredicted RBP12.91□□□□□ -0.34
VAT1-206ENST00000589709 ARHGEF4Q9NR80 690 aa12.91□□□□□ -0.34
VAT1-206ENST00000589709 VPS45Q9NRW7 570 aa12.91□□□□□ -0.34
VAT1-206ENST00000589709 FAM49BQ9NUQ9 324 aa12.91□□□□□ -0.34
VAT1-206ENST00000589709 PCDHA5Q9Y5H7 936 aa12.91□□□□□ -0.34
VAT1-206ENST00000589709 RALGAPA1Q6GYQ0 2036 aa12.9□□□□□ -0.34
VAT1-206ENST00000589709 GDF9O60383 454 aa12.9□□□□□ -0.34
VAT1-206ENST00000589709 STX10O60499 249 aa12.9□□□□□ -0.34
VAT1-206ENST00000589709 GREM1O60565 184 aa12.9□□□□□ -0.34
VAT1-206ENST00000589709 ADORA2BP29275 332 aa12.9□□□□□ -0.34
VAT1-206ENST00000589709 ATP5C1P36542 298 aaKnown RBP12.9□□□□□ -0.34
VAT1-206ENST00000589709 KIR2DL1P43626 348 aaPredicted RBP12.9□□□□□ -0.34
VAT1-206ENST00000589709 PGFP49763 221 aa12.9□□□□□ -0.34
VAT1-206ENST00000589709 SEC13P55735 322 aa12.9□□□□□ -0.34
VAT1-206ENST00000589709 MESP2Q0VG99 397 aa12.9□□□□□ -0.34
VAT1-206ENST00000589709 BTBD8Q5XKL5 378 aa12.9□□□□□ -0.34
VAT1-206ENST00000589709 C12orf40Q86WS4 652 aa12.9□□□□□ -0.34
VAT1-206ENST00000589709 BBS7Q8IWZ6 715 aa12.9□□□□□ -0.34
VAT1-206ENST00000589709 CCDC33Q8N5R6 958 aa12.9□□□□□ -0.34
VAT1-206ENST00000589709 C12orf50Q8NA57 414 aaPredicted RBP12.9□□□□□ -0.34
VAT1-206ENST00000589709 IL17RCQ8NAC3 791 aa12.9□□□□□ -0.34
VAT1-206ENST00000589709 KLF16Q9BXK1 252 aaPredicted RBP12.9□□□□□ -0.34
VAT1-206ENST00000589709 SPHK2Q9NRA0 654 aa12.9□□□□□ -0.34
VAT1-206ENST00000589709 RMND1Q9NWS8 449 aa12.9□□□□□ -0.34
VAT1-206ENST00000589709 ANTXRLA6NF34 631 aa12.89□□□□□ -0.35
VAT1-206ENST00000589709 TM4SF5O14894 197 aa12.89□□□□□ -0.35
VAT1-206ENST00000589709 DCLK1O15075 740 aa12.89□□□□□ -0.35
VAT1-206ENST00000589709 CETN3O15182 167 aa12.89□□□□□ -0.35
VAT1-206ENST00000589709 TULP3O75386 442 aa12.89□□□□□ -0.35
VAT1-206ENST00000589709 ALDH1A2O94788 518 aa12.89□□□□□ -0.35
VAT1-206ENST00000589709 ACO1P21399 889 aaKnown RBP12.89□□□□□ -0.35
VAT1-206ENST00000589709 MPLP40238 635 aa12.89□□□□□ -0.35
VAT1-206ENST00000589709 PSEN1P49768 467 aa12.89□□□□□ -0.35
VAT1-206ENST00000589709 KIF11P52732 1056 aa12.89□□□□□ -0.35
VAT1-206ENST00000589709 SF3A2Q15428 464 aaKnown RBP12.89□□□□□ -0.35
VAT1-206ENST00000589709 AASDHQ4L235 1098 aaPredicted RBP12.89□□□□□ -0.35
VAT1-206ENST00000589709 COBLL1Q53SF7 1204 aa12.89□□□□□ -0.35
VAT1-206ENST00000589709 EOGTQ5NDL2 527 aa12.89□□□□□ -0.35
VAT1-206ENST00000589709 ANO7Q6IWH7 933 aa12.89□□□□□ -0.35
VAT1-206ENST00000589709 TMEM92Q6UXU6 159 aa12.89□□□□□ -0.35
VAT1-206ENST00000589709 NUDT18Q6ZVK8 323 aa12.89□□□□□ -0.35
VAT1-206ENST00000589709 GPRIN1Q7Z2K8 1008 aa12.89□□□□□ -0.35
VAT1-206ENST00000589709 TMEM25Q86YD3 366 aa12.89□□□□□ -0.35
VAT1-206ENST00000589709 ALLCQ8N6M5 410 aa12.89□□□□□ -0.35
VAT1-206ENST00000589709 TXNDC5Q8NBS9 432 aaKnown RBP12.89□□□□□ -0.35
VAT1-206ENST00000589709 FBXL13Q8NEE6 735 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms