RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 TPX2Q9ULW0 747 aaKnown RBP10.41□□□□□ -0.74
VPS25-202ENST00000589219 USP18Q9UMW8 372 aa10.41□□□□□ -0.74
VPS25-202ENST00000589219 RRP15Q9Y3B9 282 aaKnown RBP10.41□□□□□ -0.74
VPS25-202ENST00000589219 EVPLQ92817 2033 aa10.41□□□□□ -0.74
VPS25-202ENST00000589219 PRUNE2Q8WUY3 3088 aa10.41□□□□□ -0.74
VPS25-202ENST00000589219 SCN10AQ9Y5Y9 1956 aa10.41□□□□□ -0.74
VPS25-202ENST00000589219 MYO9BQ13459 2157 aa10.41□□□□□ -0.74
VPS25-202ENST00000589219 CUL9Q8IWT3 2517 aa10.4□□□□□ -0.74
VPS25-202ENST00000589219 CITO14578 2027 aa10.4□□□□□ -0.74
VPS25-202ENST00000589219 A0A087WUV0 522 aaPredicted RBP10.4□□□□□ -0.74
VPS25-202ENST00000589219 TLDC2A0PJX2 215 aa10.4□□□□□ -0.74
VPS25-202ENST00000589219 CFAP69A5D8W1 941 aa10.4□□□□□ -0.74
VPS25-202ENST00000589219 GMNCA6NCL1 334 aa10.4□□□□□ -0.74
VPS25-202ENST00000589219 C5orf60A6NFR6 353 aa10.4□□□□□ -0.74
VPS25-202ENST00000589219 E7EVH7 732 aa10.4□□□□□ -0.74
VPS25-202ENST00000589219 SGK1O00141 431 aa10.4□□□□□ -0.74
VPS25-202ENST00000589219 PIRO00625 290 aa10.4□□□□□ -0.74
VPS25-202ENST00000589219 PRPSAP2O60256 369 aa10.4□□□□□ -0.74
VPS25-202ENST00000589219 CST8O60676 142 aa10.4□□□□□ -0.74
VPS25-202ENST00000589219 CDH16O75309 829 aa10.4□□□□□ -0.74
VPS25-202ENST00000589219 ACSL3O95573 720 aa10.4□□□□□ -0.74
VPS25-202ENST00000589219 FAM163BP0C2L3 166 aa10.4□□□□□ -0.74
VPS25-202ENST00000589219 TSHRP16473 764 aa10.4□□□□□ -0.74
VPS25-202ENST00000589219 ACADSBP45954 432 aa10.4□□□□□ -0.74
VPS25-202ENST00000589219 TAF6P49848 677 aa10.4□□□□□ -0.74
VPS25-202ENST00000589219 CCL23P55773 120 aa10.4□□□□□ -0.74
VPS25-202ENST00000589219 OTUD4Q01804 1114 aaKnown RBP10.4□□□□□ -0.74
VPS25-202ENST00000589219 TMEM62Q0P6H9 643 aa10.4□□□□□ -0.74
VPS25-202ENST00000589219 BST2Q10589 180 aaKnown RBP10.4□□□□□ -0.74
VPS25-202ENST00000589219 GPS1Q13098 491 aa10.4□□□□□ -0.74
VPS25-202ENST00000589219 GRIN2CQ14957 1233 aa10.4□□□□□ -0.74
VPS25-202ENST00000589219 PDK2Q15119 407 aa10.4□□□□□ -0.74
VPS25-202ENST00000589219 KCTD19Q17RG1 926 aaPredicted RBP10.4□□□□□ -0.74
VPS25-202ENST00000589219 SMTNL2Q2TAL5 461 aa10.4□□□□□ -0.74
VPS25-202ENST00000589219 RNASEH2BQ5TBB1 312 aaKnown RBP10.4□□□□□ -0.74
VPS25-202ENST00000589219 FOXR1Q6PIV2 292 aa10.4□□□□□ -0.74
VPS25-202ENST00000589219 OLFML1Q6UWY5 402 aa10.4□□□□□ -0.74
VPS25-202ENST00000589219 CENPUQ71F23 418 aa10.4□□□□□ -0.74
VPS25-202ENST00000589219 ARCQ7LC44 396 aa10.4□□□□□ -0.74
VPS25-202ENST00000589219 TMEM110Q86TL2 294 aa10.4□□□□□ -0.74
VPS25-202ENST00000589219 MAP7D3Q8IWC1 876 aa10.4□□□□□ -0.74
VPS25-202ENST00000589219 HACE1Q8IYU2 909 aa10.4□□□□□ -0.74
VPS25-202ENST00000589219 ARFGAP1Q8N6T3 406 aa10.4□□□□□ -0.74
VPS25-202ENST00000589219 EMC1Q8N766 993 aa10.4□□□□□ -0.74
VPS25-202ENST00000589219 KCTD6Q8NC69 237 aa10.4□□□□□ -0.74
VPS25-202ENST00000589219 UBA3Q8TBC4 463 aa10.4□□□□□ -0.74
VPS25-202ENST00000589219 ACTL9Q8TC94 416 aa10.4□□□□□ -0.74
VPS25-202ENST00000589219 DNAJB3Q8WWF6 145 aa10.4□□□□□ -0.74
VPS25-202ENST00000589219 RXFP2Q8WXD0 754 aa10.4□□□□□ -0.74
VPS25-202ENST00000589219 ACSF2Q96CM8 615 aaPredicted RBP10.4□□□□□ -0.74
VPS25-202ENST00000589219 ZMAT2Q96NC0 199 aaKnown RBP10.4□□□□□ -0.74
VPS25-202ENST00000589219 XPO6Q96QU8 1125 aaKnown RBP10.4□□□□□ -0.74
VPS25-202ENST00000589219 GAS2L1Q99501 681 aaPredicted RBP10.4□□□□□ -0.74
VPS25-202ENST00000589219 DDX23Q9BUQ8 820 aaKnown RBP10.4□□□□□ -0.74
VPS25-202ENST00000589219 PBX4Q9BYU1 374 aa10.4□□□□□ -0.74
VPS25-202ENST00000589219 CCDC134Q9H6E4 229 aa10.4□□□□□ -0.74
VPS25-202ENST00000589219 GINS2Q9Y248 185 aa10.4□□□□□ -0.74
VPS25-202ENST00000589219 ACTL7BQ9Y614 415 aa10.4□□□□□ -0.74
VPS25-202ENST00000589219 PDCD11Q14690 1871 aaKnown RBP10.4□□□□□ -0.75
VPS25-202ENST00000589219 GBF1Q92538 1859 aa10.4□□□□□ -0.75
VPS25-202ENST00000589219 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.39□□□□□ -0.75
VPS25-202ENST00000589219 SMIM23A6NLE4 172 aa10.39□□□□□ -0.75
VPS25-202ENST00000589219 A8MXQ7 604 aa10.39□□□□□ -0.75
VPS25-202ENST00000589219 M0QZ92 97 aa10.39□□□□□ -0.75
VPS25-202ENST00000589219 MDM4O15151 490 aa10.39□□□□□ -0.75
VPS25-202ENST00000589219 ENDOD1O94919 500 aa10.39□□□□□ -0.75
VPS25-202ENST00000589219 PDGFRAP16234 1089 aa10.39□□□□□ -0.75
VPS25-202ENST00000589219 TGM2P21980 687 aa10.39□□□□□ -0.75
VPS25-202ENST00000589219 WARSP23381 471 aaKnown RBP10.39□□□□□ -0.75
VPS25-202ENST00000589219 SDC4P31431 198 aa10.39□□□□□ -0.75
VPS25-202ENST00000589219 RFC2P35250 354 aa10.39□□□□□ -0.75
VPS25-202ENST00000589219 MAGEA4P43358 317 aa10.39□□□□□ -0.75
VPS25-202ENST00000589219 PTPN9P43378 593 aa10.39□□□□□ -0.75
VPS25-202ENST00000589219 SLC6A3Q01959 620 aa10.39□□□□□ -0.75
VPS25-202ENST00000589219 ROR1Q01973 937 aa10.39□□□□□ -0.75
VPS25-202ENST00000589219 NR1H3Q13133 447 aa10.39□□□□□ -0.75
VPS25-202ENST00000589219 KRT81Q14533 505 aa10.39□□□□□ -0.75
VPS25-202ENST00000589219 NOMO1Q15155 1222 aa10.39□□□□□ -0.75
VPS25-202ENST00000589219 NBPF20Q3BBV1 942 aa10.39□□□□□ -0.75
VPS25-202ENST00000589219 BOLA3Q53S33 107 aa10.39□□□□□ -0.75
VPS25-202ENST00000589219 UBXN11Q5T124 520 aa10.39□□□□□ -0.75
VPS25-202ENST00000589219 ERMARDQ5T6L9 678 aa10.39□□□□□ -0.75
VPS25-202ENST00000589219 PPP1R26Q5T8A7 1209 aaPredicted RBP10.39□□□□□ -0.75
VPS25-202ENST00000589219 DPH6Q7L8W6 267 aa10.39□□□□□ -0.75
VPS25-202ENST00000589219 OTOP2Q7RTS6 562 aa10.39□□□□□ -0.75
VPS25-202ENST00000589219 LIMS2Q7Z4I7 341 aa10.39□□□□□ -0.75
VPS25-202ENST00000589219 ACOT1Q86TX2 421 aa10.39□□□□□ -0.75
VPS25-202ENST00000589219 TTC30AQ86WT1 665 aa10.39□□□□□ -0.75
VPS25-202ENST00000589219 TDRPQ86YL5 185 aa10.39□□□□□ -0.75
VPS25-202ENST00000589219 PPIL6Q8IXY8 311 aa10.39□□□□□ -0.75
VPS25-202ENST00000589219 TMEM130Q8N3G9 435 aa10.39□□□□□ -0.75
VPS25-202ENST00000589219 TOP6BLQ8N6T0 577 aa10.39□□□□□ -0.75
VPS25-202ENST00000589219 OR6B3Q8NGW1 331 aa10.39□□□□□ -0.75
VPS25-202ENST00000589219 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.39□□□□□ -0.75
VPS25-202ENST00000589219 RSAD2Q8WXG1 361 aa10.39□□□□□ -0.75
VPS25-202ENST00000589219 HSPH1Q92598 858 aa10.39□□□□□ -0.75
VPS25-202ENST00000589219 PRCCQ92733 491 aaPredicted RBP10.39□□□□□ -0.75
VPS25-202ENST00000589219 HAUS1Q96CS2 278 aa10.39□□□□□ -0.75
VPS25-202ENST00000589219 TNIP3Q96KP6 325 aa10.39□□□□□ -0.75
VPS25-202ENST00000589219 HSFY1Q96LI6 401 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms