RNA–Protein interactions for RNA: ENST00000588972.1

ATG4D-210, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 632 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-210ENST00000588972 REPS2Q8NFH8 660 aa8.63□□□□□ -1.03
ATG4D-210ENST00000588972 HERVK_113Q902F9 699 aa8.63□□□□□ -1.03
ATG4D-210ENST00000588972 INTS4Q96HW7 963 aaKnown RBP8.63□□□□□ -1.03
ATG4D-210ENST00000588972 DYDC2Q96IM9 177 aa8.63□□□□□ -1.03
ATG4D-210ENST00000588972 SAMD11Q96NU1 681 aa8.63□□□□□ -1.03
ATG4D-210ENST00000588972 DMRTA2Q96SC8 542 aa8.63□□□□□ -1.03
ATG4D-210ENST00000588972 TACO1Q9BSH4 297 aaKnown RBP8.63□□□□□ -1.03
ATG4D-210ENST00000588972 UBAC1Q9BSL1 405 aa8.63□□□□□ -1.03
ATG4D-210ENST00000588972 LRRC2Q9BYS8 371 aa8.63□□□□□ -1.03
ATG4D-210ENST00000588972 UPF3AQ9H1J1 476 aaKnown RBP8.63□□□□□ -1.03
ATG4D-210ENST00000588972 IL23AQ9NPF7 189 aa8.63□□□□□ -1.03
ATG4D-210ENST00000588972 GPRC5BQ9NZH0 403 aa8.63□□□□□ -1.03
ATG4D-210ENST00000588972 ARHGAP20Q9P2F6 1191 aa8.63□□□□□ -1.03
ATG4D-210ENST00000588972 MAGEL2Q9UJ55 1249 aa8.63□□□□□ -1.03
ATG4D-210ENST00000588972 PNMA2Q9UL42 364 aa8.63□□□□□ -1.03
ATG4D-210ENST00000588972 TPCN1Q9ULQ1 816 aa8.63□□□□□ -1.03
ATG4D-210ENST00000588972 MCM3APO60318 1980 aa8.62□□□□□ -1.03
ATG4D-210ENST00000588972 A0A1W2PR48 441 aa8.62□□□□□ -1.03
ATG4D-210ENST00000588972 IFIT3O14879 490 aaKnown RBP8.62□□□□□ -1.03
ATG4D-210ENST00000588972 SNAI1O95863 264 aaPredicted RBP8.62□□□□□ -1.03
ATG4D-210ENST00000588972 C8BP07358 591 aa8.62□□□□□ -1.03
ATG4D-210ENST00000588972 GOLGA8HP0CJ92 632 aa8.62□□□□□ -1.03
ATG4D-210ENST00000588972 PDHBP11177 359 aa8.62□□□□□ -1.03
ATG4D-210ENST00000588972 CPA1P15085 419 aa8.62□□□□□ -1.03
ATG4D-210ENST00000588972 CTSSP25774 331 aa8.62□□□□□ -1.03
ATG4D-210ENST00000588972 SLC16A2P36021 539 aa8.62□□□□□ -1.03
ATG4D-210ENST00000588972 PPM1FP49593 454 aaPredicted RBP8.62□□□□□ -1.03
ATG4D-210ENST00000588972 STAT2P52630 851 aa8.62□□□□□ -1.03
ATG4D-210ENST00000588972 IKQ13123 557 aaPredicted RBP8.62□□□□□ -1.03
ATG4D-210ENST00000588972 ACVR2BQ13705 512 aa8.62□□□□□ -1.03
ATG4D-210ENST00000588972 AAK1Q2M2I8 961 aa8.62□□□□□ -1.03
ATG4D-210ENST00000588972 SNRNP48Q6IEG0 339 aaKnown RBP8.62□□□□□ -1.03
ATG4D-210ENST00000588972 FAM180AQ6UWF9 173 aa8.62□□□□□ -1.03
ATG4D-210ENST00000588972 C3orf20Q8ND61 904 aa8.62□□□□□ -1.03
ATG4D-210ENST00000588972 RAB24Q969Q5 203 aa8.62□□□□□ -1.03
ATG4D-210ENST00000588972 TCEANC2Q96MN5 208 aa8.62□□□□□ -1.03
ATG4D-210ENST00000588972 NAP1L4Q99733 375 aaKnown RBP8.62□□□□□ -1.03
ATG4D-210ENST00000588972 VPS11Q9H270 941 aa8.62□□□□□ -1.03
ATG4D-210ENST00000588972 CPVLQ9H3G5 476 aa8.62□□□□□ -1.03
ATG4D-210ENST00000588972 ABHD16BQ9H3Z7 469 aa8.62□□□□□ -1.03
ATG4D-210ENST00000588972 KAT14Q9H8E8 782 aa8.62□□□□□ -1.03
ATG4D-210ENST00000588972 ARFGAP3Q9NP61 516 aa8.62□□□□□ -1.03
ATG4D-210ENST00000588972 FEM1BQ9UK73 627 aa8.62□□□□□ -1.03
ATG4D-210ENST00000588972 PRRC2BQ5JSZ5 2229 aaKnown RBP8.62□□□□□ -1.03
ATG4D-210ENST00000588972 TCF20Q9UGU0 1960 aaKnown RBP8.61□□□□□ -1.03
ATG4D-210ENST00000588972 LRRC37A2A6NM11 1700 aa8.61□□□□□ -1.03
ATG4D-210ENST00000588972 MYH6P13533 1939 aa8.61□□□□□ -1.03
ATG4D-210ENST00000588972 KIAA1324LA8MWY0 1029 aaPredicted RBP8.61□□□□□ -1.03
ATG4D-210ENST00000588972 N4BP3O15049 544 aa8.61□□□□□ -1.03
ATG4D-210ENST00000588972 PHGDHO43175 533 aaKnown RBP8.61□□□□□ -1.03
ATG4D-210ENST00000588972 ADCY6O43306 1168 aa8.61□□□□□ -1.03
ATG4D-210ENST00000588972 NCK2O43639 380 aa8.61□□□□□ -1.03
ATG4D-210ENST00000588972 AKR1B10O60218 316 aa8.61□□□□□ -1.03
ATG4D-210ENST00000588972 REC8O95072 547 aa8.61□□□□□ -1.03
ATG4D-210ENST00000588972 CD4P01730 458 aa8.61□□□□□ -1.03
ATG4D-210ENST00000588972 SNHG28P0DPA3 235 aa8.61□□□□□ -1.03
ATG4D-210ENST00000588972 CYP2C18P33260 490 aa8.61□□□□□ -1.03
ATG4D-210ENST00000588972 HSPA4P34932 840 aa8.61□□□□□ -1.03
ATG4D-210ENST00000588972 SLC6A9P48067 706 aa8.61□□□□□ -1.03
ATG4D-210ENST00000588972 CD97P48960 835 aa8.61□□□□□ -1.03
ATG4D-210ENST00000588972 YBX1P67809 324 aaKnown RBP8.61□□□□□ -1.03
ATG4D-210ENST00000588972 CDC42EP1Q00587 391 aa8.61□□□□□ -1.03
ATG4D-210ENST00000588972 MEF2AQ02078 507 aaPredicted RBP8.61□□□□□ -1.03
ATG4D-210ENST00000588972 CD69Q07108 199 aa8.61□□□□□ -1.03
ATG4D-210ENST00000588972 ZNF543Q08ER8 600 aa8.61□□□□□ -1.03
ATG4D-210ENST00000588972 WTAPQ15007 396 aa8.61□□□□□ -1.03
ATG4D-210ENST00000588972 PHF19Q5T6S3 580 aa8.61□□□□□ -1.03
ATG4D-210ENST00000588972 IZUMO3Q5VZ72 239 aa8.61□□□□□ -1.03
ATG4D-210ENST00000588972 SYDE1Q6ZW31 735 aaPredicted RBP8.61□□□□□ -1.03
ATG4D-210ENST00000588972 CXXC5Q7LFL8 322 aaKnown RBP8.61□□□□□ -1.03
ATG4D-210ENST00000588972 HEATR3Q7Z4Q2 680 aa8.61□□□□□ -1.03
ATG4D-210ENST00000588972 IL31RAQ8NI17 732 aa8.61□□□□□ -1.03
ATG4D-210ENST00000588972 CPA5Q8WXQ8 436 aa8.61□□□□□ -1.03
ATG4D-210ENST00000588972 ANKS1AQ92625 1134 aa8.61□□□□□ -1.03
ATG4D-210ENST00000588972 KIAA1191Q96A73 305 aa8.61□□□□□ -1.03
ATG4D-210ENST00000588972 SLC35A4Q96G79 324 aa8.61□□□□□ -1.03
ATG4D-210ENST00000588972 CLPTM1LQ96KA5 538 aa8.61□□□□□ -1.03
ATG4D-210ENST00000588972 TTC14Q96N46 770 aa8.61□□□□□ -1.03
ATG4D-210ENST00000588972 HIPK3Q9H422 1215 aa8.61□□□□□ -1.03
ATG4D-210ENST00000588972 LY9Q9HBG7 655 aa8.61□□□□□ -1.03
ATG4D-210ENST00000588972 RAVER2Q9HCJ3 691 aaKnown RBP8.61□□□□□ -1.03
ATG4D-210ENST00000588972 LMBRD1Q9NUN5 540 aa8.61□□□□□ -1.03
ATG4D-210ENST00000588972 TDP1Q9NUW8 608 aa8.61□□□□□ -1.03
ATG4D-210ENST00000588972 POLR3BQ9NW08 1133 aaPredicted RBP8.61□□□□□ -1.03
ATG4D-210ENST00000588972 ZFP69BQ9UJL9 534 aa8.61□□□□□ -1.03
ATG4D-210ENST00000588972 LRCH1Q9Y2L9 728 aa8.61□□□□□ -1.03
ATG4D-210ENST00000588972 PCDHA3Q9Y5H8 950 aa8.61□□□□□ -1.03
ATG4D-210ENST00000588972 SNX14Q9Y5W7 946 aa8.61□□□□□ -1.03
ATG4D-210ENST00000588972 SNX13Q9Y5W8 968 aa8.61□□□□□ -1.03
ATG4D-210ENST00000588972 ERICH2A1L162 156 aa8.6□□□□□ -1.03
ATG4D-210ENST00000588972 OR14I1A6ND48 311 aa8.6□□□□□ -1.03
ATG4D-210ENST00000588972 H3BUI4 141 aa8.6□□□□□ -1.03
ATG4D-210ENST00000588972 SH2B2O14492 632 aaPredicted RBP8.6□□□□□ -1.03
ATG4D-210ENST00000588972 ATP2A1O14983 1001 aa8.6□□□□□ -1.03
ATG4D-210ENST00000588972 ZBED4O75132 1171 aa8.6□□□□□ -1.03
ATG4D-210ENST00000588972 LY86O95711 162 aa8.6□□□□□ -1.03
ATG4D-210ENST00000588972 FGBP02675 491 aa8.6□□□□□ -1.03
ATG4D-210ENST00000588972 RPL17P18621 184 aaKnown RBP8.6□□□□□ -1.03
ATG4D-210ENST00000588972 ABCB4P21439 1286 aa8.6□□□□□ -1.03
ATG4D-210ENST00000588972 SSTR4P31391 388 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms