RNA–Protein interactions for RNA: ENST00000588712.5

NEDD4L-224, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 2,066 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-224ENST00000588712 RSPO2Q6UXX9 243 aaPredicted RBP11.06□□□□□ -0.64
NEDD4L-224ENST00000588712 DENND5BQ6ZUT9 1274 aa11.06□□□□□ -0.64
NEDD4L-224ENST00000588712 CTAGE6Q86UF2 777 aa11.06□□□□□ -0.64
NEDD4L-224ENST00000588712 CREG2Q8IUH2 290 aa11.06□□□□□ -0.64
NEDD4L-224ENST00000588712 CTAGE4Q8IX94 777 aa11.06□□□□□ -0.64
NEDD4L-224ENST00000588712 EMC1Q8N766 993 aa11.06□□□□□ -0.64
NEDD4L-224ENST00000588712 EXD1Q8NHP7 514 aa11.06□□□□□ -0.64
NEDD4L-224ENST00000588712 CENPIQ92674 756 aaPredicted RBP11.06□□□□□ -0.64
NEDD4L-224ENST00000588712 RBM41Q96IZ5 413 aaKnown RBP11.06□□□□□ -0.64
NEDD4L-224ENST00000588712 SEPT5Q99719 369 aaPredicted RBP11.06□□□□□ -0.64
NEDD4L-224ENST00000588712 TRIM7Q9C029 511 aa11.06□□□□□ -0.64
NEDD4L-224ENST00000588712 UBE2OQ9C0C9 1292 aaKnown RBP11.06□□□□□ -0.64
NEDD4L-224ENST00000588712 IL37Q9NZH6 218 aa11.06□□□□□ -0.64
NEDD4L-224ENST00000588712 NLRC5Q86WI3 1866 aa11.06□□□□□ -0.64
NEDD4L-224ENST00000588712 RIOK3O14730 519 aaKnown RBP11.05□□□□□ -0.64
NEDD4L-224ENST00000588712 PRPSAP2O60256 369 aa11.05□□□□□ -0.64
NEDD4L-224ENST00000588712 CEP104O60308 925 aa11.05□□□□□ -0.64
NEDD4L-224ENST00000588712 LILRB3O75022 631 aa11.05□□□□□ -0.64
NEDD4L-224ENST00000588712 SRGAP2O75044 1071 aa11.05□□□□□ -0.64
NEDD4L-224ENST00000588712 GRAP2O75791 330 aa11.05□□□□□ -0.64
NEDD4L-224ENST00000588712 GJB6O95452 261 aa11.05□□□□□ -0.64
NEDD4L-224ENST00000588712 CXCL14O95715 111 aa11.05□□□□□ -0.64
NEDD4L-224ENST00000588712 YWHAQP27348 245 aa11.05□□□□□ -0.64
NEDD4L-224ENST00000588712 CXCR5P32302 372 aa11.05□□□□□ -0.64
NEDD4L-224ENST00000588712 GBP1P32455 592 aa11.05□□□□□ -0.64
NEDD4L-224ENST00000588712 FLT3P36888 993 aa11.05□□□□□ -0.64
NEDD4L-224ENST00000588712 ALDH1A3P47895 512 aa11.05□□□□□ -0.64
NEDD4L-224ENST00000588712 AIF1P55008 147 aa11.05□□□□□ -0.64
NEDD4L-224ENST00000588712 OGDHQ02218 1023 aa11.05□□□□□ -0.64
NEDD4L-224ENST00000588712 ZNF252P-AS1Q0IIN9 211 aa11.05□□□□□ -0.64
NEDD4L-224ENST00000588712 VEPH1Q14D04 833 aa11.05□□□□□ -0.64
NEDD4L-224ENST00000588712 SHHQ15465 462 aa11.05□□□□□ -0.64
NEDD4L-224ENST00000588712 PSTKQ8IV42 348 aaKnown RBP11.05□□□□□ -0.64
NEDD4L-224ENST00000588712 MAP7D3Q8IWC1 876 aa11.05□□□□□ -0.64
NEDD4L-224ENST00000588712 TCEAL8Q8IYN2 117 aa11.05□□□□□ -0.64
NEDD4L-224ENST00000588712 RASGEF1CQ8N431 466 aa11.05□□□□□ -0.64
NEDD4L-224ENST00000588712 NT5C3BQ969T7 300 aa11.05□□□□□ -0.64
NEDD4L-224ENST00000588712 TGS1Q96RS0 853 aaKnown RBP11.05□□□□□ -0.64
NEDD4L-224ENST00000588712 CDK5RAP1Q96SZ6 601 aaKnown RBP11.05□□□□□ -0.64
NEDD4L-224ENST00000588712 RHOBTB2Q9BYZ6 727 aa11.05□□□□□ -0.64
NEDD4L-224ENST00000588712 TMEM30AQ9NV96 361 aa11.05□□□□□ -0.64
NEDD4L-224ENST00000588712 FAM92AA1XBS5 289 aa11.05□□□□□ -0.64
NEDD4L-224ENST00000588712 PGRMC1O00264 195 aaKnown RBP11.05□□□□□ -0.64
NEDD4L-224ENST00000588712 LRCH4O75427 683 aa11.05□□□□□ -0.64
NEDD4L-224ENST00000588712 ENDOD1O94919 500 aa11.05□□□□□ -0.64
NEDD4L-224ENST00000588712 CSH1P0DML2 217 aa11.05□□□□□ -0.64
NEDD4L-224ENST00000588712 CSH2P0DML3 217 aa11.05□□□□□ -0.64
NEDD4L-224ENST00000588712 CHRM1P11229 460 aaPredicted RBP11.05□□□□□ -0.64
NEDD4L-224ENST00000588712 PPP3CCP48454 512 aa11.05□□□□□ -0.64
NEDD4L-224ENST00000588712 YWHAGP61981 247 aaKnown RBP eCLIP11.05□□□□□ -0.64
NEDD4L-224ENST00000588712 TAF5Q15542 800 aa11.05□□□□□ -0.64
NEDD4L-224ENST00000588712 RAB30Q15771 203 aa11.05□□□□□ -0.64
NEDD4L-224ENST00000588712 DDR2Q16832 855 aa11.05□□□□□ -0.64
NEDD4L-224ENST00000588712 DCAF6Q58WW2 860 aa11.05□□□□□ -0.64
NEDD4L-224ENST00000588712 ZFYVE27Q5T4F4 411 aa11.05□□□□□ -0.64
NEDD4L-224ENST00000588712 BTBD8Q5XKL5 378 aa11.05□□□□□ -0.64
NEDD4L-224ENST00000588712 CCDC149Q6ZUS6 474 aa11.05□□□□□ -0.64
NEDD4L-224ENST00000588712 SND1Q7KZF4 910 aaKnown RBP eCLIP11.05□□□□□ -0.64
NEDD4L-224ENST00000588712 ZNF572Q7Z3I7 529 aaPredicted RBP11.05□□□□□ -0.64
NEDD4L-224ENST00000588712 TADA2BQ86TJ2 420 aa11.05□□□□□ -0.64
NEDD4L-224ENST00000588712 DEFB106AQ8N104 65 aa11.05□□□□□ -0.64
NEDD4L-224ENST00000588712 PDZD8Q8NEN9 1154 aa11.05□□□□□ -0.64
NEDD4L-224ENST00000588712 CLEC4CQ8WTT0 213 aa11.05□□□□□ -0.64
NEDD4L-224ENST00000588712 COG1Q8WTW3 980 aa11.05□□□□□ -0.64
NEDD4L-224ENST00000588712 FAM172AQ8WUF8 416 aa11.05□□□□□ -0.64
NEDD4L-224ENST00000588712 TEKT4Q8WW24 435 aa11.05□□□□□ -0.64
NEDD4L-224ENST00000588712 OVCA2Q8WZ82 227 aa11.05□□□□□ -0.64
NEDD4L-224ENST00000588712 PGAP3Q96FM1 320 aaPredicted RBP11.05□□□□□ -0.64
NEDD4L-224ENST00000588712 SLITRK1Q96PX8 696 aa11.05□□□□□ -0.64
NEDD4L-224ENST00000588712 CYP4F11Q9HBI6 524 aa11.05□□□□□ -0.64
NEDD4L-224ENST00000588712 TLR9Q9NR96 1032 aa11.05□□□□□ -0.64
NEDD4L-224ENST00000588712 TLR8Q9NR97 1041 aaKnown RBP11.05□□□□□ -0.64
NEDD4L-224ENST00000588712 DPP7Q9UHL4 492 aa11.05□□□□□ -0.64
NEDD4L-224ENST00000588712 MSRAQ9UJ68 235 aa11.05□□□□□ -0.64
NEDD4L-224ENST00000588712 MTUS1Q9ULD2 1270 aa11.05□□□□□ -0.64
NEDD4L-224ENST00000588712 USP18Q9UMW8 372 aa11.05□□□□□ -0.64
NEDD4L-224ENST00000588712 SLC27A5Q9Y2P5 690 aa11.05□□□□□ -0.64
NEDD4L-224ENST00000588712 GOLGA6L10A0A0M3HER8 536 aa11.04□□□□□ -0.64
NEDD4L-224ENST00000588712 YJEFN3A6XGL0 299 aa11.04□□□□□ -0.64
NEDD4L-224ENST00000588712 EFCAB8A8MWE9 144 aa11.04□□□□□ -0.64
NEDD4L-224ENST00000588712 E7ENQ6 273 aa11.04□□□□□ -0.64
NEDD4L-224ENST00000588712 NCAM1P13591 858 aa11.04□□□□□ -0.64
NEDD4L-224ENST00000588712 RPL17P18621 184 aaKnown RBP11.04□□□□□ -0.64
NEDD4L-224ENST00000588712 DNA2P51530 1060 aa11.04□□□□□ -0.64
NEDD4L-224ENST00000588712 MTA1Q13330 715 aa11.04□□□□□ -0.64
NEDD4L-224ENST00000588712 TAF12Q16514 161 aa11.04□□□□□ -0.64
NEDD4L-224ENST00000588712 C9orf50Q5SZB4 431 aa11.04□□□□□ -0.64
NEDD4L-224ENST00000588712 BSPRYQ5W0U4 402 aa11.04□□□□□ -0.64
NEDD4L-224ENST00000588712 CCDC70Q6NSX1 233 aa11.04□□□□□ -0.64
NEDD4L-224ENST00000588712 ELMSAN1Q6PJG2 1045 aa11.04□□□□□ -0.64
NEDD4L-224ENST00000588712 GPRIN1Q7Z2K8 1008 aa11.04□□□□□ -0.64
NEDD4L-224ENST00000588712 ITIH5Q86UX2 942 aa11.04□□□□□ -0.64
NEDD4L-224ENST00000588712 VSIG1Q86XK7 387 aa11.04□□□□□ -0.64
NEDD4L-224ENST00000588712 MRPL43Q8N983 215 aaKnown RBP11.04□□□□□ -0.64
NEDD4L-224ENST00000588712 SPPL3Q8TCT6 385 aa11.04□□□□□ -0.64
NEDD4L-224ENST00000588712 ALG3Q92685 438 aa11.04□□□□□ -0.64
NEDD4L-224ENST00000588712 PIWIL1Q96J94 861 aaKnown RBP11.04□□□□□ -0.64
NEDD4L-224ENST00000588712 CAPZA3Q96KX2 299 aa11.04□□□□□ -0.64
NEDD4L-224ENST00000588712 CFAP57Q96MR6 1250 aa11.04□□□□□ -0.64
NEDD4L-224ENST00000588712 PSMB7Q99436 277 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms