RNA–Protein interactions for RNA: ENST00000586495.1

TRIM47-203, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 605 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-203ENST00000586495 CSRP2Q16527 193 aa17.93■□□□□ 0.46
TRIM47-203ENST00000586495 GAB4Q2WGN9 574 aa17.93■□□□□ 0.46
TRIM47-203ENST00000586495 COBLL1Q53SF7 1204 aa17.93■□□□□ 0.46
TRIM47-203ENST00000586495 RHBDF2Q6PJF5 856 aa17.93■□□□□ 0.46
TRIM47-203ENST00000586495 CLEC20AQ6ZU45 233 aa17.93■□□□□ 0.46
TRIM47-203ENST00000586495 FBXL13Q8NEE6 735 aa17.93■□□□□ 0.46
TRIM47-203ENST00000586495 USP33Q8TEY7 942 aa17.93■□□□□ 0.46
TRIM47-203ENST00000586495 ZFRQ96KR1 1074 aaKnown RBP17.93■□□□□ 0.46
TRIM47-203ENST00000586495 TWNKQ96RR1 684 aa17.93■□□□□ 0.46
TRIM47-203ENST00000586495 PNKPQ96T60 521 aa17.93■□□□□ 0.46
TRIM47-203ENST00000586495 DUSP9Q99956 384 aaKnown RBP17.93■□□□□ 0.46
TRIM47-203ENST00000586495 EBF1Q9UH73 591 aa17.93■□□□□ 0.46
TRIM47-203ENST00000586495 PCDHA5Q9Y5H7 936 aa17.93■□□□□ 0.46
TRIM47-203ENST00000586495 K7EQS6 105 aa17.92■□□□□ 0.46
TRIM47-203ENST00000586495 SCAMP3O14828 347 aaKnown RBP17.92■□□□□ 0.46
TRIM47-203ENST00000586495 TLR5O60602 858 aa17.92■□□□□ 0.46
TRIM47-203ENST00000586495 APODP05090 189 aa17.92■□□□□ 0.46
TRIM47-203ENST00000586495 SEC13P55735 322 aa17.92■□□□□ 0.46
TRIM47-203ENST00000586495 MRPS21P82921 87 aaKnown RBP17.92■□□□□ 0.46
TRIM47-203ENST00000586495 FKBP3Q00688 224 aaKnown RBP17.92■□□□□ 0.46
TRIM47-203ENST00000586495 PREPLQ4J6C6 727 aaPredicted RBP17.92■□□□□ 0.46
TRIM47-203ENST00000586495 C2orf27AQ580R0 203 aa17.92■□□□□ 0.46
TRIM47-203ENST00000586495 BTBD8Q5XKL5 378 aa17.92■□□□□ 0.46
TRIM47-203ENST00000586495 TSTD1Q8NFU3 115 aa17.92■□□□□ 0.46
TRIM47-203ENST00000586495 WHAMMQ8TF30 809 aa17.92■□□□□ 0.46
TRIM47-203ENST00000586495 EEF2KMTQ96G04 330 aa17.92■□□□□ 0.46
TRIM47-203ENST00000586495 RTKNQ9BST9 563 aa17.92■□□□□ 0.46
TRIM47-203ENST00000586495 FAM124BQ9H5Z6 455 aaPredicted RBP17.92■□□□□ 0.46
TRIM47-203ENST00000586495 POLR3BQ9NW08 1133 aaPredicted RBP17.92■□□□□ 0.46
TRIM47-203ENST00000586495 RAB20Q9NX57 234 aa17.92■□□□□ 0.46
TRIM47-203ENST00000586495 SCML2Q9UQR0 700 aa17.92■□□□□ 0.46
TRIM47-203ENST00000586495 KAT7O95251 611 aa17.91■□□□□ 0.46
TRIM47-203ENST00000586495 ACO1P21399 889 aaKnown RBP17.91■□□□□ 0.46
TRIM47-203ENST00000586495 ATP5C1P36542 298 aaKnown RBP17.91■□□□□ 0.46
TRIM47-203ENST00000586495 SLC6A11P48066 632 aa17.91■□□□□ 0.46
TRIM47-203ENST00000586495 ATXN1P54253 815 aaKnown RBP17.91■□□□□ 0.46
TRIM47-203ENST00000586495 GOLGA8FQ08AF8 430 aa17.91■□□□□ 0.46
TRIM47-203ENST00000586495 GOLGA8DPQ0D2H9 430 aa17.91■□□□□ 0.46
TRIM47-203ENST00000586495 HSF5Q4G112 596 aaPredicted RBP17.91■□□□□ 0.46
TRIM47-203ENST00000586495 LY6G5CQ5SRR4 150 aa17.91■□□□□ 0.46
TRIM47-203ENST00000586495 TCERG1LQ5VWI1 586 aa17.91■□□□□ 0.46
TRIM47-203ENST00000586495 PRR23CQ6ZRP0 262 aa17.91■□□□□ 0.46
TRIM47-203ENST00000586495 NUDT18Q6ZVK8 323 aa17.91■□□□□ 0.46
TRIM47-203ENST00000586495 ENGASEQ8NFI3 743 aa17.91■□□□□ 0.46
TRIM47-203ENST00000586495 SMARCE1Q969G3 411 aa17.91■□□□□ 0.46
TRIM47-203ENST00000586495 JAKMIP2Q96AA8 810 aa17.91■□□□□ 0.46
TRIM47-203ENST00000586495 HEXIM2Q96MH2 286 aaKnown RBP17.91■□□□□ 0.46
TRIM47-203ENST00000586495 TIGD1Q96MW7 591 aa17.91■□□□□ 0.46
TRIM47-203ENST00000586495 CYLDQ9NQC7 956 aa17.91■□□□□ 0.46
TRIM47-203ENST00000586495 ARHGEF4Q9NR80 690 aa17.91■□□□□ 0.46
TRIM47-203ENST00000586495 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.91■□□□□ 0.46
TRIM47-203ENST00000586495 HHLA1C9JL84 531 aa17.9■□□□□ 0.46
TRIM47-203ENST00000586495 SLC16A3O15427 465 aaKnown RBP17.9■□□□□ 0.46
TRIM47-203ENST00000586495 IRF1P10914 325 aa17.9■□□□□ 0.46
TRIM47-203ENST00000586495 GRIA2P42262 883 aa17.9■□□□□ 0.46
TRIM47-203ENST00000586495 DGKEP52429 567 aa17.9■□□□□ 0.46
TRIM47-203ENST00000586495 STIM1Q13586 685 aa17.9■□□□□ 0.46
TRIM47-203ENST00000586495 ZNF394Q53GI3 561 aa17.9■□□□□ 0.46
TRIM47-203ENST00000586495 PPP1R26Q5T8A7 1209 aaPredicted RBP17.9■□□□□ 0.46
TRIM47-203ENST00000586495 TADA2BQ86TJ2 420 aa17.9■□□□□ 0.46
TRIM47-203ENST00000586495 KBTBD6Q86V97 674 aa17.9■□□□□ 0.46
TRIM47-203ENST00000586495 SPATA20Q8TB22 786 aa17.9■□□□□ 0.46
TRIM47-203ENST00000586495 NETO1Q8TDF5 533 aa17.9■□□□□ 0.46
TRIM47-203ENST00000586495 SEMA4DQ92854 862 aa17.9■□□□□ 0.46
TRIM47-203ENST00000586495 TMEM176AQ96HP8 235 aa17.9■□□□□ 0.46
TRIM47-203ENST00000586495 ZC3H10Q96K80 434 aaKnown RBP17.9■□□□□ 0.46
TRIM47-203ENST00000586495 DUSP16Q9BY84 665 aa17.9■□□□□ 0.46
TRIM47-203ENST00000586495 SPHK2Q9NRA0 654 aa17.9■□□□□ 0.46
TRIM47-203ENST00000586495 LSM7Q9UK45 103 aaKnown RBP17.9■□□□□ 0.46
TRIM47-203ENST00000586495 MMP17Q9ULZ9 603 aa17.9■□□□□ 0.46
TRIM47-203ENST00000586495 RALGAPA1Q6GYQ0 2036 aa17.89■□□□□ 0.46
TRIM47-203ENST00000586495 CEP250Q9BV73 2442 aa17.89■□□□□ 0.45
TRIM47-203ENST00000586495 A0A0A0MRY4 1105 aa17.89■□□□□ 0.45
TRIM47-203ENST00000586495 HOXC11O43248 304 aaPredicted RBP17.89■□□□□ 0.45
TRIM47-203ENST00000586495 RHOBTB1O94844 696 aa17.89■□□□□ 0.45
TRIM47-203ENST00000586495 EPN2O95208 641 aa17.89■□□□□ 0.45
TRIM47-203ENST00000586495 TNFRSF4P43489 277 aa17.89■□□□□ 0.45
TRIM47-203ENST00000586495 PSEN1P49768 467 aa17.89■□□□□ 0.45
TRIM47-203ENST00000586495 KIF11P52732 1056 aa17.89■□□□□ 0.45
TRIM47-203ENST00000586495 LRRC63Q05C16 580 aa17.89■□□□□ 0.45
TRIM47-203ENST00000586495 ELF2Q15723 593 aa17.89■□□□□ 0.45
TRIM47-203ENST00000586495 DCAF17Q5H9S7 520 aaPredicted RBP17.89■□□□□ 0.45
TRIM47-203ENST00000586495 ANKRD40Q6AI12 368 aa17.89■□□□□ 0.45
TRIM47-203ENST00000586495 HTR3DQ70Z44 454 aa17.89■□□□□ 0.45
TRIM47-203ENST00000586495 GPRIN1Q7Z2K8 1008 aa17.89■□□□□ 0.45
TRIM47-203ENST00000586495 C12orf40Q86WS4 652 aa17.89■□□□□ 0.45
TRIM47-203ENST00000586495 BBS7Q8IWZ6 715 aa17.89■□□□□ 0.45
TRIM47-203ENST00000586495 KLF16Q9BXK1 252 aaPredicted RBP17.89■□□□□ 0.45
TRIM47-203ENST00000586495 ARRDC1-AS1Q9H2J1 176 aa17.89■□□□□ 0.45
TRIM47-203ENST00000586495 CISHQ9NSE2 258 aa17.89■□□□□ 0.45
TRIM47-203ENST00000586495 PCDHGA5Q9Y5G8 931 aa17.89■□□□□ 0.45
TRIM47-203ENST00000586495 DCHS1Q96JQ0 3298 aa17.89■□□□□ 0.45
TRIM47-203ENST00000586495 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.88■□□□□ 0.45
TRIM47-203ENST00000586495 CYP26A1O43174 497 aa17.88■□□□□ 0.45
TRIM47-203ENST00000586495 ALDH1A2O94788 518 aa17.88■□□□□ 0.45
TRIM47-203ENST00000586495 TBX18O95935 607 aa17.88■□□□□ 0.45
TRIM47-203ENST00000586495 RALAP11233 206 aa17.88■□□□□ 0.45
TRIM47-203ENST00000586495 RARGP13631 454 aa17.88■□□□□ 0.45
TRIM47-203ENST00000586495 TIE1P35590 1138 aa17.88■□□□□ 0.45
TRIM47-203ENST00000586495 PPP1R2P41236 205 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms