RNA–Protein interactions for RNA: ENST00000586315.1

ATP6V0A1-210, Transcript of ATPase H+ transporting V0 subunit a1, human

TSL 3

Gene ATP6V0A1, Length 357 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP6V0A1-210	ENST00000586315	PRR11	Q96HE9	360 aa	Predicted RBP	2.56	□□□□□ -2
ATP6V0A1-210	ENST00000586315	PUS7	Q96PZ0	661 aa	Known RBP	2.56	□□□□□ -2
ATP6V0A1-210	ENST00000586315	VN1R3	Q9BXE9	311 aa		2.56	□□□□□ -2
ATP6V0A1-210	ENST00000586315	B3GNT5	Q9BYG0	378 aa		2.56	□□□□□ -2
ATP6V0A1-210	ENST00000586315	XPNPEP3	Q9NQH7	507 aa		2.56	□□□□□ -2
ATP6V0A1-210	ENST00000586315	USP22	Q9UPT9	525 aa		2.56	□□□□□ -2
ATP6V0A1-210	ENST00000586315	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	2.55	□□□□□ -2
ATP6V0A1-210	ENST00000586315	C16orf96	A6NNT2	1141 aa		2.55	□□□□□ -2
ATP6V0A1-210	ENST00000586315	CLIC1	O00299	241 aa		2.55	□□□□□ -2
ATP6V0A1-210	ENST00000586315	EXOC5	O00471	708 aa		2.55	□□□□□ -2
ATP6V0A1-210	ENST00000586315	CD3EAP	O15446	510 aa	Known RBP	2.55	□□□□□ -2
ATP6V0A1-210	ENST00000586315	PRPF3	O43395	683 aa	Known RBP	2.55	□□□□□ -2
ATP6V0A1-210	ENST00000586315	RGS10	O43665	173 aa		2.55	□□□□□ -2
ATP6V0A1-210	ENST00000586315	TUSC2	O75896	110 aa		2.55	□□□□□ -2
ATP6V0A1-210	ENST00000586315	FGF2	P09038	288 aa		2.55	□□□□□ -2
ATP6V0A1-210	ENST00000586315	CT47B1	P0C2W7	299 aa	Predicted RBP	2.55	□□□□□ -2
ATP6V0A1-210	ENST00000586315	TMEM191B	P0C7N4	346 aa		2.55	□□□□□ -2
ATP6V0A1-210	ENST00000586315	CTSA	P10619	480 aa		2.55	□□□□□ -2
ATP6V0A1-210	ENST00000586315	EN2	P19622	333 aa	Predicted RBP	2.55	□□□□□ -2
ATP6V0A1-210	ENST00000586315	TNFRSF1B	P20333	461 aa		2.55	□□□□□ -2
ATP6V0A1-210	ENST00000586315	SLC7A1	P30825	629 aa		2.55	□□□□□ -2
ATP6V0A1-210	ENST00000586315	PRKAR1B	P31321	381 aa		2.55	□□□□□ -2
ATP6V0A1-210	ENST00000586315	THBS3	P49746	956 aa		2.55	□□□□□ -2
ATP6V0A1-210	ENST00000586315	HTR6	P50406	440 aa		2.55	□□□□□ -2
ATP6V0A1-210	ENST00000586315	SUMO2	P61956	95 aa	Known RBP	2.55	□□□□□ -2
ATP6V0A1-210	ENST00000586315	SATB1	Q01826	763 aa		2.55	□□□□□ -2
ATP6V0A1-210	ENST00000586315	FHL3	Q13643	280 aa		2.55	□□□□□ -2
ATP6V0A1-210	ENST00000586315	ANO6	Q4KMQ2	910 aa		2.55	□□□□□ -2
ATP6V0A1-210	ENST00000586315	C3orf38	Q5JPI3	329 aa		2.55	□□□□□ -2
ATP6V0A1-210	ENST00000586315	MAEA	Q7L5Y9	396 aa		2.55	□□□□□ -2
ATP6V0A1-210	ENST00000586315	EDC3	Q96F86	508 aa	Known RBP	2.55	□□□□□ -2
ATP6V0A1-210	ENST00000586315	BRIP1	Q9BX63	1249 aa		2.55	□□□□□ -2
ATP6V0A1-210	ENST00000586315	ADGRE3	Q9BY15	652 aa		2.55	□□□□□ -2
ATP6V0A1-210	ENST00000586315	C22orf23	Q9BZE7	217 aa		2.55	□□□□□ -2
ATP6V0A1-210	ENST00000586315	A1CF	Q9NQ94	594 aa	Known RBP	2.55	□□□□□ -2
ATP6V0A1-210	ENST00000586315	SACM1L	Q9NTJ5	587 aa		2.55	□□□□□ -2
ATP6V0A1-210	ENST00000586315	ZSCAN32	Q9NX65	697 aa		2.55	□□□□□ -2
ATP6V0A1-210	ENST00000586315	ZMYM2	Q9UBW7	1377 aa		2.55	□□□□□ -2
ATP6V0A1-210	ENST00000586315	CNTNAP2	Q9UHC6	1331 aa		2.55	□□□□□ -2
ATP6V0A1-210	ENST00000586315	ZNF180	Q9UJW8	692 aa		2.55	□□□□□ -2
ATP6V0A1-210	ENST00000586315	PNMA8B	Q9ULN7	279 aa	Predicted RBP	2.55	□□□□□ -2
ATP6V0A1-210	ENST00000586315	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	2.55	□□□□□ -2
ATP6V0A1-210	ENST00000586315		A6NNZ2	444 aa		2.54	□□□□□ -2
ATP6V0A1-210	ENST00000586315		H3BNX3	289 aa		2.54	□□□□□ -2
ATP6V0A1-210	ENST00000586315	PYCARD-AS1	I3L0S3	204 aa		2.54	□□□□□ -2
ATP6V0A1-210	ENST00000586315	GTPBP1	O00178	669 aa	Known RBP	2.54	□□□□□ -2
ATP6V0A1-210	ENST00000586315	RRH	O14718	337 aa		2.54	□□□□□ -2
ATP6V0A1-210	ENST00000586315	FYB1	O15117	783 aa		2.54	□□□□□ -2
ATP6V0A1-210	ENST00000586315	PHGDH	O43175	533 aa	Known RBP	2.54	□□□□□ -2
ATP6V0A1-210	ENST00000586315	CA12	O43570	354 aa		2.54	□□□□□ -2
ATP6V0A1-210	ENST00000586315	RRP9	O43818	475 aa	Known RBP	2.54	□□□□□ -2
ATP6V0A1-210	ENST00000586315	PRAMEF2	O60811	474 aa		2.54	□□□□□ -2
ATP6V0A1-210	ENST00000586315	CNOT3	O75175	753 aa	Known RBP	2.54	□□□□□ -2
ATP6V0A1-210	ENST00000586315	CRYAB	P02511	175 aa	Known RBP	2.54	□□□□□ -2
ATP6V0A1-210	ENST00000586315	HSPA6	P17066	643 aa		2.54	□□□□□ -2
ATP6V0A1-210	ENST00000586315	EPHA3	P29320	983 aa		2.54	□□□□□ -2
ATP6V0A1-210	ENST00000586315	PTDSS1	P48651	473 aa	Known RBP	2.54	□□□□□ -2
ATP6V0A1-210	ENST00000586315	GATM	P50440	423 aa		2.54	□□□□□ -2
ATP6V0A1-210	ENST00000586315	TIAL1	Q01085	375 aa	Known RBP eCLIP	2.54	□□□□□ -2
ATP6V0A1-210	ENST00000586315	ID2	Q02363	134 aa		2.54	□□□□□ -2
ATP6V0A1-210	ENST00000586315	CFHR3	Q02985	330 aa		2.54	□□□□□ -2
ATP6V0A1-210	ENST00000586315	PIN1	Q13526	163 aa	Predicted RBP	2.54	□□□□□ -2
ATP6V0A1-210	ENST00000586315	RAB32	Q13637	225 aa		2.54	□□□□□ -2
ATP6V0A1-210	ENST00000586315	MFSD13A	Q14CX5	517 aa		2.54	□□□□□ -2
ATP6V0A1-210	ENST00000586315	ZNF750	Q32MQ0	723 aa		2.54	□□□□□ -2
ATP6V0A1-210	ENST00000586315	MIDN	Q504T8	468 aa		2.54	□□□□□ -2
ATP6V0A1-210	ENST00000586315	APOA5	Q6Q788	366 aa		2.54	□□□□□ -2
ATP6V0A1-210	ENST00000586315	C9orf47	Q6ZRZ4	202 aa		2.54	□□□□□ -2
ATP6V0A1-210	ENST00000586315	USP49	Q70CQ1	688 aa		2.54	□□□□□ -2
ATP6V0A1-210	ENST00000586315	RAB11FIP4	Q86YS3	637 aa		2.54	□□□□□ -2
ATP6V0A1-210	ENST00000586315	CHPF	Q8IZ52	775 aa		2.54	□□□□□ -2
ATP6V0A1-210	ENST00000586315	PELI3	Q8N2H9	469 aa		2.54	□□□□□ -2
ATP6V0A1-210	ENST00000586315	RBMXL3	Q8N7X1	1067 aa	Known RBP	2.54	□□□□□ -2
ATP6V0A1-210	ENST00000586315	ACRBP	Q8NEB7	543 aa		2.54	□□□□□ -2
ATP6V0A1-210	ENST00000586315	CUL5	Q93034	780 aa		2.54	□□□□□ -2
ATP6V0A1-210	ENST00000586315	SPSB4	Q96A44	273 aa		2.54	□□□□□ -2
ATP6V0A1-210	ENST00000586315	MARK4	Q96L34	752 aa		2.54	□□□□□ -2
ATP6V0A1-210	ENST00000586315	AIFM3	Q96NN9	605 aa		2.54	□□□□□ -2
ATP6V0A1-210	ENST00000586315	SCNM1	Q9BWG6	230 aa		2.54	□□□□□ -2
ATP6V0A1-210	ENST00000586315	TM2D2	Q9BX73	214 aa		2.54	□□□□□ -2
ATP6V0A1-210	ENST00000586315	STK31	Q9BXU1	1019 aa		2.54	□□□□□ -2
ATP6V0A1-210	ENST00000586315	ZNF518B	Q9C0D4	1074 aa		2.54	□□□□□ -2
ATP6V0A1-210	ENST00000586315	AGO4	Q9HCK5	861 aa	Known RBP	2.54	□□□□□ -2
ATP6V0A1-210	ENST00000586315	NMRK2	Q9NPI5	230 aa		2.54	□□□□□ -2
ATP6V0A1-210	ENST00000586315	ZBTB40	Q9NUA8	1239 aa		2.54	□□□□□ -2
ATP6V0A1-210	ENST00000586315	GAR1	Q9NY12	217 aa	Known RBP	2.54	□□□□□ -2
ATP6V0A1-210	ENST00000586315	RIMKLB	Q9ULI2	386 aa		2.54	□□□□□ -2
ATP6V0A1-210	ENST00000586315	SQOR	Q9Y6N5	450 aa		2.54	□□□□□ -2
ATP6V0A1-210	ENST00000586315	EVPL	Q92817	2033 aa		2.53	□□□□□ -2
ATP6V0A1-210	ENST00000586315	TRIM43B	A6NCK2	446 aa		2.53	□□□□□ -2
ATP6V0A1-210	ENST00000586315	CTNND1	O60716	968 aa	Known RBP	2.53	□□□□□ -2
ATP6V0A1-210	ENST00000586315	RASSF9	O75901	435 aa		2.53	□□□□□ -2
ATP6V0A1-210	ENST00000586315	TOMM40	O96008	361 aa		2.53	□□□□□ -2
ATP6V0A1-210	ENST00000586315	MBP	P02686	304 aa	Predicted RBP	2.53	□□□□□ -2
ATP6V0A1-210	ENST00000586315	PARP1	P09874	1014 aa	Known RBP	2.53	□□□□□ -2
ATP6V0A1-210	ENST00000586315	IL1R1	P14778	569 aa		2.53	□□□□□ -2
ATP6V0A1-210	ENST00000586315	SCP2	P22307	547 aa		2.53	□□□□□ -2
ATP6V0A1-210	ENST00000586315	PGD	P52209	483 aa		2.53	□□□□□ -2
ATP6V0A1-210	ENST00000586315	RPS16	P62249	146 aa	Known RBP	2.53	□□□□□ -2
ATP6V0A1-210	ENST00000586315	GPC5	P78333	572 aa		2.53	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 26 ms