RNA–Protein interactions for RNA: ENST00000584377.5

CSNK1D-222, Transcript of casein kinase 1 delta, human

TSL 2

Gene CSNK1D, Length 2,891 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSNK1D-222	ENST00000584377	ZC3H18	Q86VM9	953 aa	Known RBP	13.79	□□□□□ -0.2
CSNK1D-222	ENST00000584377	PALM2	Q8IXS6	379 aa		13.79	□□□□□ -0.2
CSNK1D-222	ENST00000584377	FBF1	Q8TES7	1133 aa		13.79	□□□□□ -0.2
CSNK1D-222	ENST00000584377	AFG1L	Q8WV93	481 aa		13.79	□□□□□ -0.2
CSNK1D-222	ENST00000584377	PIWIL1	Q96J94	861 aa	Known RBP	13.79	□□□□□ -0.2
CSNK1D-222	ENST00000584377	NT5C1A	Q9BXI3	368 aa		13.79	□□□□□ -0.2
CSNK1D-222	ENST00000584377	ACSS3	Q9H6R3	686 aa		13.79	□□□□□ -0.2
CSNK1D-222	ENST00000584377	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	13.79	□□□□□ -0.2
CSNK1D-222	ENST00000584377	HGS	O14964	777 aa	Predicted RBP	13.78	□□□□□ -0.2
CSNK1D-222	ENST00000584377	TYROBP	O43914	113 aa		13.78	□□□□□ -0.2
CSNK1D-222	ENST00000584377	PRPSAP2	O60256	369 aa		13.78	□□□□□ -0.2
CSNK1D-222	ENST00000584377	TSPAN1	O60635	241 aa		13.78	□□□□□ -0.2
CSNK1D-222	ENST00000584377	GRAP2	O75791	330 aa		13.78	□□□□□ -0.2
CSNK1D-222	ENST00000584377	CYP2C8	P10632	490 aa		13.78	□□□□□ -0.2
CSNK1D-222	ENST00000584377	MGAT5	Q09328	741 aa		13.78	□□□□□ -0.2
CSNK1D-222	ENST00000584377	ACVR2B	Q13705	512 aa		13.78	□□□□□ -0.2
CSNK1D-222	ENST00000584377	DPYSL3	Q14195	570 aa		13.78	□□□□□ -0.2
CSNK1D-222	ENST00000584377	KLHL38	Q2WGJ6	581 aa		13.78	□□□□□ -0.2
CSNK1D-222	ENST00000584377	RAB6C	Q53S08	254 aa		13.78	□□□□□ -0.2
CSNK1D-222	ENST00000584377	DARS2	Q6PI48	645 aa	Known RBP	13.78	□□□□□ -0.2
CSNK1D-222	ENST00000584377	CCDC125	Q86Z20	511 aa		13.78	□□□□□ -0.2
CSNK1D-222	ENST00000584377	C12orf29	Q8N999	325 aa		13.78	□□□□□ -0.2
CSNK1D-222	ENST00000584377	SHCBP1	Q8NEM2	672 aa		13.78	□□□□□ -0.2
CSNK1D-222	ENST00000584377	PPTC7	Q8NI37	304 aa		13.78	□□□□□ -0.2
CSNK1D-222	ENST00000584377	KIF12	Q96FN5	646 aa		13.78	□□□□□ -0.2
CSNK1D-222	ENST00000584377	ANKRD27	Q96NW4	1050 aa		13.78	□□□□□ -0.2
CSNK1D-222	ENST00000584377	PAFAH2	Q99487	392 aa		13.78	□□□□□ -0.2
CSNK1D-222	ENST00000584377	MIS12	Q9H081	205 aa		13.78	□□□□□ -0.2
CSNK1D-222	ENST00000584377	RAB6C	Q9H0N0	254 aa		13.78	□□□□□ -0.2
CSNK1D-222	ENST00000584377	PNMA3	Q9UL41	463 aa		13.78	□□□□□ -0.2
CSNK1D-222	ENST00000584377	GRID1	Q9ULK0	1009 aa		13.78	□□□□□ -0.2
CSNK1D-222	ENST00000584377	STIP1	P31948	543 aa	Known RBP	13.78	□□□□□ -0.2
CSNK1D-222	ENST00000584377	ATP11A	P98196	1134 aa		13.78	□□□□□ -0.2
CSNK1D-222	ENST00000584377	RNASEL	Q05823	741 aa	Known RBP	13.78	□□□□□ -0.2
CSNK1D-222	ENST00000584377	NOMO1	Q15155	1222 aa		13.78	□□□□□ -0.2
CSNK1D-222	ENST00000584377	SLC1A5	Q15758	541 aa		13.78	□□□□□ -0.2
CSNK1D-222	ENST00000584377	PDK4	Q16654	411 aa		13.78	□□□□□ -0.2
CSNK1D-222	ENST00000584377	RGS9BP	Q6ZS82	235 aa		13.78	□□□□□ -0.2
CSNK1D-222	ENST00000584377	CYP4V2	Q6ZWL3	525 aa	Predicted RBP	13.78	□□□□□ -0.2
CSNK1D-222	ENST00000584377	TRIM74	Q86UV6	250 aa		13.78	□□□□□ -0.2
CSNK1D-222	ENST00000584377	TRIM73	Q86UV7	250 aa		13.78	□□□□□ -0.2
CSNK1D-222	ENST00000584377	ECHDC2	Q86YB7	292 aa		13.78	□□□□□ -0.2
CSNK1D-222	ENST00000584377	TTC39C	Q8N584	583 aa		13.78	□□□□□ -0.2
CSNK1D-222	ENST00000584377	ZCWPW1	Q9H0M4	648 aa		13.78	□□□□□ -0.2
CSNK1D-222	ENST00000584377	LMCD1	Q9NZU5	365 aa		13.78	□□□□□ -0.2
CSNK1D-222	ENST00000584377	KIAA1257	Q9ULG3	409 aa		13.78	□□□□□ -0.2
CSNK1D-222	ENST00000584377	PHTF1	Q9UMS5	762 aa		13.78	□□□□□ -0.2
CSNK1D-222	ENST00000584377	STARD13	Q9Y3M8	1113 aa		13.78	□□□□□ -0.2
CSNK1D-222	ENST00000584377	ENDOD1	O94919	500 aa		13.77	□□□□□ -0.2
CSNK1D-222	ENST00000584377	RGS7	P49802	495 aa		13.77	□□□□□ -0.2
CSNK1D-222	ENST00000584377	TUB	P50607	506 aa		13.77	□□□□□ -0.2
CSNK1D-222	ENST00000584377	TFDP2	Q14188	446 aa		13.77	□□□□□ -0.2
CSNK1D-222	ENST00000584377	HHAT	Q5VTY9	493 aa		13.77	□□□□□ -0.2
CSNK1D-222	ENST00000584377	TRAF3IP1	Q8TDR0	691 aa	Predicted RBP	13.77	□□□□□ -0.2
CSNK1D-222	ENST00000584377	LRRC8C	Q8TDW0	803 aa		13.77	□□□□□ -0.2
CSNK1D-222	ENST00000584377	SLCO1B3	Q9NPD5	702 aa		13.77	□□□□□ -0.2
CSNK1D-222	ENST00000584377	ARHGEF3	Q9NR81	526 aa		13.77	□□□□□ -0.2
CSNK1D-222	ENST00000584377	RNF181	Q9P0P0	153 aa		13.77	□□□□□ -0.2
CSNK1D-222	ENST00000584377	NPTXR	O95502	500 aa		13.77	□□□□□ -0.21
CSNK1D-222	ENST00000584377	STAU1	O95793	577 aa	Known RBP	13.77	□□□□□ -0.21
CSNK1D-222	ENST00000584377	GOLGA7B	Q2TAP0	167 aa		13.77	□□□□□ -0.21
CSNK1D-222	ENST00000584377	FAM47C	Q5HY64	1035 aa		13.77	□□□□□ -0.21
CSNK1D-222	ENST00000584377	ADGRD1	Q6QNK2	874 aa		13.77	□□□□□ -0.21
CSNK1D-222	ENST00000584377	ARHGAP22	Q7Z5H3	698 aa		13.77	□□□□□ -0.21
CSNK1D-222	ENST00000584377	DHRS4	Q9BTZ2	278 aa		13.77	□□□□□ -0.21
CSNK1D-222	ENST00000584377	CHMP2B	Q9UQN3	213 aa		13.77	□□□□□ -0.21
CSNK1D-222	ENST00000584377	ASB3	Q9Y575	518 aa		13.77	□□□□□ -0.21
CSNK1D-222	ENST00000584377		A0A1B0GVG6	124 aa		13.77	□□□□□ -0.21
CSNK1D-222	ENST00000584377		H7C0C1	242 aa		13.77	□□□□□ -0.21
CSNK1D-222	ENST00000584377	PFKM	P08237	780 aa		13.77	□□□□□ -0.21
CSNK1D-222	ENST00000584377	RANBP1	P43487	201 aa		13.77	□□□□□ -0.21
CSNK1D-222	ENST00000584377	ATP5O	P48047	213 aa		13.77	□□□□□ -0.21
CSNK1D-222	ENST00000584377	KRT81	Q14533	505 aa		13.77	□□□□□ -0.21
CSNK1D-222	ENST00000584377	LVRN	Q6Q4G3	990 aa		13.77	□□□□□ -0.21
CSNK1D-222	ENST00000584377	MAMDC4	Q6UXC1	1216 aa		13.77	□□□□□ -0.21
CSNK1D-222	ENST00000584377	NT5DC4	Q86YG4	428 aa		13.77	□□□□□ -0.21
CSNK1D-222	ENST00000584377	MAP7D3	Q8IWC1	876 aa		13.77	□□□□□ -0.21
CSNK1D-222	ENST00000584377	GORASP1	Q9BQQ3	440 aa		13.77	□□□□□ -0.21
CSNK1D-222	ENST00000584377	C16orf70	Q9BSU1	422 aa		13.77	□□□□□ -0.21
CSNK1D-222	ENST00000584377	FAM124B	Q9H5Z6	455 aa	Predicted RBP	13.77	□□□□□ -0.21
CSNK1D-222	ENST00000584377	GBA2	Q9HCG7	927 aa	Predicted RBP	13.77	□□□□□ -0.21
CSNK1D-222	ENST00000584377	SSU72	Q9NP77	194 aa	Known RBP	13.77	□□□□□ -0.21
CSNK1D-222	ENST00000584377	VTA1	Q9NP79	307 aa		13.77	□□□□□ -0.21
CSNK1D-222	ENST00000584377	LRRC42	Q9Y546	428 aa		13.77	□□□□□ -0.21
CSNK1D-222	ENST00000584377	COL1A2	P08123	1366 aa		13.76	□□□□□ -0.21
CSNK1D-222	ENST00000584377		H3BRB1	525 aa		13.76	□□□□□ -0.21
CSNK1D-222	ENST00000584377	ZWINT	O95229	277 aa		13.76	□□□□□ -0.21
CSNK1D-222	ENST00000584377	ADORA2A	P29274	412 aa		13.76	□□□□□ -0.21
CSNK1D-222	ENST00000584377	ADCYAP1R1	P41586	468 aa		13.76	□□□□□ -0.21
CSNK1D-222	ENST00000584377	MRPS35	P82673	323 aa	Known RBP	13.76	□□□□□ -0.21
CSNK1D-222	ENST00000584377	SCYL2	Q6P3W7	929 aa		13.76	□□□□□ -0.21
CSNK1D-222	ENST00000584377	C1orf228	Q6PIY5	440 aa		13.76	□□□□□ -0.21
CSNK1D-222	ENST00000584377	SYT15	Q9BQS2	421 aa		13.76	□□□□□ -0.21
CSNK1D-222	ENST00000584377	TUT1	Q9H6E5	874 aa	Known RBP	13.76	□□□□□ -0.21
CSNK1D-222	ENST00000584377	NGRN	Q9NPE2	291 aa	Known RBP	13.76	□□□□□ -0.21
CSNK1D-222	ENST00000584377	CHCHD3	Q9NX63	227 aa	Known RBP	13.76	□□□□□ -0.21
CSNK1D-222	ENST00000584377	ELK3	P41970	407 aa		13.76	□□□□□ -0.21
CSNK1D-222	ENST00000584377	STIL	Q15468	1287 aa		13.76	□□□□□ -0.21
CSNK1D-222	ENST00000584377	ZNF792	Q3KQV3	632 aa		13.76	□□□□□ -0.21
CSNK1D-222	ENST00000584377	CCDC14	Q49A88	953 aa		13.76	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms