RNA–Protein interactions for RNA: ENST00000583965.5

CDRT1-207, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDRT1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-207ENST00000583965 ARCQ7LC44 396 aa12.24□□□□□ -0.45
CDRT1-207ENST00000583965 SCUBE3Q8IX30 993 aa12.24□□□□□ -0.45
CDRT1-207ENST00000583965 C3orf20Q8ND61 904 aa12.24□□□□□ -0.45
CDRT1-207ENST00000583965 STKLD1Q8NE28 680 aa12.24□□□□□ -0.45
CDRT1-207ENST00000583965 CTNNBL1Q8WYA6 563 aaPredicted RBP12.24□□□□□ -0.45
CDRT1-207ENST00000583965 SMG7Q92540 1137 aaKnown RBP12.24□□□□□ -0.45
CDRT1-207ENST00000583965 GOLGA1Q92805 767 aa12.24□□□□□ -0.45
CDRT1-207ENST00000583965 ZNF653Q96CK0 615 aa12.24□□□□□ -0.45
CDRT1-207ENST00000583965 MCRS1Q96EZ8 462 aa12.24□□□□□ -0.45
CDRT1-207ENST00000583965 GCNAQ96QF7 691 aa12.24□□□□□ -0.45
CDRT1-207ENST00000583965 PIDD1Q9HB75 910 aa12.24□□□□□ -0.45
CDRT1-207ENST00000583965 MRPL47Q9HD33 250 aaKnown RBP12.24□□□□□ -0.45
CDRT1-207ENST00000583965 TJP2Q9UDY2 1190 aa12.24□□□□□ -0.45
CDRT1-207ENST00000583965 MAGED2Q9UNF1 606 aaPredicted RBP12.24□□□□□ -0.45
CDRT1-207ENST00000583965 PCDHA13Q9Y5I0 950 aa12.24□□□□□ -0.45
CDRT1-207ENST00000583965 SCINQ9Y6U3 715 aa12.24□□□□□ -0.45
CDRT1-207ENST00000583965 PIK3R2O00459 728 aa12.23□□□□□ -0.45
CDRT1-207ENST00000583965 ZNF197O14709 1029 aa12.23□□□□□ -0.45
CDRT1-207ENST00000583965 HSF2BPO75031 334 aa12.23□□□□□ -0.45
CDRT1-207ENST00000583965 TBX10O75333 385 aa12.23□□□□□ -0.45
CDRT1-207ENST00000583965 LTFP02788 710 aa12.23□□□□□ -0.45
CDRT1-207ENST00000583965 CYP1A2P05177 515 aa12.23□□□□□ -0.45
CDRT1-207ENST00000583965 RHOP08100 348 aa12.23□□□□□ -0.45
CDRT1-207ENST00000583965 ZDHHC11BP0C7U3 371 aa12.23□□□□□ -0.45
CDRT1-207ENST00000583965 CDC25CP30307 473 aa12.23□□□□□ -0.45
CDRT1-207ENST00000583965 RARS2Q5T160 578 aaKnown RBP12.23□□□□□ -0.45
CDRT1-207ENST00000583965 FAM102AQ5T9C2 384 aaPredicted RBP12.23□□□□□ -0.45
CDRT1-207ENST00000583965 PLEKHA7Q6IQ23 1121 aa12.23□□□□□ -0.45
CDRT1-207ENST00000583965 CES5AQ6NT32 575 aa12.23□□□□□ -0.45
CDRT1-207ENST00000583965 DNAJC24Q6P3W2 148 aa12.23□□□□□ -0.45
CDRT1-207ENST00000583965 TMC5Q6UXY8 1006 aa12.23□□□□□ -0.45
CDRT1-207ENST00000583965 BHLHA9Q7RTU4 235 aa12.23□□□□□ -0.45
CDRT1-207ENST00000583965 GPR149Q86SP6 731 aa12.23□□□□□ -0.45
CDRT1-207ENST00000583965 TMC8Q8IU68 726 aa12.23□□□□□ -0.45
CDRT1-207ENST00000583965 ZNF276Q8N554 614 aa12.23□□□□□ -0.45
CDRT1-207ENST00000583965 CDK5RAP1Q96SZ6 601 aaKnown RBP12.23□□□□□ -0.45
CDRT1-207ENST00000583965 CORO1BQ9BR76 489 aa12.23□□□□□ -0.45
CDRT1-207ENST00000583965 SELENOOQ9BVL4 669 aa12.23□□□□□ -0.45
CDRT1-207ENST00000583965 LRRC3Q9BY71 257 aa12.23□□□□□ -0.45
CDRT1-207ENST00000583965 THAP2Q9H0W7 228 aa12.23□□□□□ -0.45
CDRT1-207ENST00000583965 PARVAQ9NVD7 372 aa12.23□□□□□ -0.45
CDRT1-207ENST00000583965 TRPM5Q9NZQ8 1165 aa12.23□□□□□ -0.45
CDRT1-207ENST00000583965 CLEC1BQ9P126 229 aa12.23□□□□□ -0.45
CDRT1-207ENST00000583965 DNMT3BQ9UBC3 853 aaKnown RBP12.23□□□□□ -0.45
CDRT1-207ENST00000583965 CNOT8Q9UFF9 292 aaKnown RBP12.23□□□□□ -0.45
CDRT1-207ENST00000583965 ZMYM5Q9UJ78 669 aa12.23□□□□□ -0.45
CDRT1-207ENST00000583965 ADGRG1Q9Y653 693 aa12.23□□□□□ -0.45
CDRT1-207ENST00000583965 CLUHO75153 1309 aa12.22□□□□□ -0.45
CDRT1-207ENST00000583965 TCRBV5S1A1TA0A578 114 aa12.22□□□□□ -0.45
CDRT1-207ENST00000583965 SIGLEC16A6NMB1 481 aa12.22□□□□□ -0.45
CDRT1-207ENST00000583965 YJEFN3A6XGL0 299 aa12.22□□□□□ -0.45
CDRT1-207ENST00000583965 SOBPA7XYQ1 873 aa12.22□□□□□ -0.45
CDRT1-207ENST00000583965 E7ENQ6 273 aa12.22□□□□□ -0.45
CDRT1-207ENST00000583965 F11P03951 625 aa12.22□□□□□ -0.45
CDRT1-207ENST00000583965 CCDC175P0C221 793 aa12.22□□□□□ -0.45
CDRT1-207ENST00000583965 PFKLP17858 780 aa12.22□□□□□ -0.45
CDRT1-207ENST00000583965 ABCB4P21439 1286 aa12.22□□□□□ -0.45
CDRT1-207ENST00000583965 RRM1P23921 792 aa12.22□□□□□ -0.45
CDRT1-207ENST00000583965 GABRR2P28476 465 aa12.22□□□□□ -0.45
CDRT1-207ENST00000583965 LTBRP36941 435 aa12.22□□□□□ -0.45
CDRT1-207ENST00000583965 TUBP50607 506 aa12.22□□□□□ -0.45
CDRT1-207ENST00000583965 VAV2P52735 878 aa12.22□□□□□ -0.45
CDRT1-207ENST00000583965 YWHAGP61981 247 aaKnown RBP eCLIP12.22□□□□□ -0.45
CDRT1-207ENST00000583965 YWHAZP63104 245 aaKnown RBP12.22□□□□□ -0.45
CDRT1-207ENST00000583965 C2CD6Q53TS8 623 aa12.22□□□□□ -0.45
CDRT1-207ENST00000583965 PDZD4Q76G19 769 aaPredicted RBP12.22□□□□□ -0.45
CDRT1-207ENST00000583965 KIAA1328Q86T90 577 aa12.22□□□□□ -0.45
CDRT1-207ENST00000583965 TADA2BQ86TJ2 420 aa12.22□□□□□ -0.45
CDRT1-207ENST00000583965 DNAAF5Q86Y56 855 aa12.22□□□□□ -0.45
CDRT1-207ENST00000583965 RHOT2Q8IXI1 618 aa12.22□□□□□ -0.45
CDRT1-207ENST00000583965 HS6ST3Q8IZP7 471 aa12.22□□□□□ -0.45
CDRT1-207ENST00000583965 C12orf76Q8N812 135 aaPredicted RBP12.22□□□□□ -0.45
CDRT1-207ENST00000583965 ACRBPQ8NEB7 543 aa12.22□□□□□ -0.45
CDRT1-207ENST00000583965 CLEC4CQ8WTT0 213 aa12.22□□□□□ -0.45
CDRT1-207ENST00000583965 FAM149B1Q96BN6 582 aa12.22□□□□□ -0.45
CDRT1-207ENST00000583965 MSLNLQ96KJ4 702 aa12.22□□□□□ -0.45
CDRT1-207ENST00000583965 RIPOR3Q96MK2 946 aa12.22□□□□□ -0.45
CDRT1-207ENST00000583965 PACSIN1Q9BY11 444 aa12.22□□□□□ -0.45
CDRT1-207ENST00000583965 ADAM7Q9H2U9 754 aa12.22□□□□□ -0.45
CDRT1-207ENST00000583965 IL21Q9HBE4 155 aa12.22□□□□□ -0.45
CDRT1-207ENST00000583965 POPDC2Q9HBU9 364 aa12.22□□□□□ -0.45
CDRT1-207ENST00000583965 ZNF334Q9HCZ1 680 aaPredicted RBP12.22□□□□□ -0.45
CDRT1-207ENST00000583965 ABCC13Q9NSE7 274 aa12.22□□□□□ -0.45
CDRT1-207ENST00000583965 HCFC1R1Q9NWW0 138 aa12.22□□□□□ -0.45
CDRT1-207ENST00000583965 CLIC5Q9NZA1 410 aa12.22□□□□□ -0.45
CDRT1-207ENST00000583965 GMIPQ9P107 970 aa12.22□□□□□ -0.45
CDRT1-207ENST00000583965 UVRAGQ9P2Y5 699 aa12.22□□□□□ -0.45
CDRT1-207ENST00000583965 REXO2Q9Y3B8 237 aaKnown RBP12.22□□□□□ -0.45
CDRT1-207ENST00000583965 A0A0A6YYK5 440 aaPredicted RBP12.21□□□□□ -0.45
CDRT1-207ENST00000583965 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.21□□□□□ -0.45
CDRT1-207ENST00000583965 A0A1W2PQH9 124 aa12.21□□□□□ -0.45
CDRT1-207ENST00000583965 FAM170AA1A519 330 aa12.21□□□□□ -0.45
CDRT1-207ENST00000583965 ZNF840PA6NDX5 716 aa12.21□□□□□ -0.45
CDRT1-207ENST00000583965 BTNL10A8MVZ5 291 aa12.21□□□□□ -0.45
CDRT1-207ENST00000583965 GOLGA8SH3BPF8 625 aa12.21□□□□□ -0.45
CDRT1-207ENST00000583965 PJA2O43164 708 aa12.21□□□□□ -0.45
CDRT1-207ENST00000583965 CCP110O43303 1012 aa12.21□□□□□ -0.45
CDRT1-207ENST00000583965 TADA3O75528 432 aa12.21□□□□□ -0.45
CDRT1-207ENST00000583965 DAB1O75553 588 aa12.21□□□□□ -0.45
CDRT1-207ENST00000583965 RALAP11233 206 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms