RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 C12orf76Q8N812 135 aaPredicted RBP14.99□□□□□ -0.01
SKA2-205ENST00000580541 C3orf20Q8ND61 904 aa14.99□□□□□ -0.01
SKA2-205ENST00000580541 RNF139Q8WU17 664 aa14.99□□□□□ -0.01
SKA2-205ENST00000580541 HLA-CQ95604 372 aa14.99□□□□□ -0.01
SKA2-205ENST00000580541 FAM149B1Q96BN6 582 aa14.99□□□□□ -0.01
SKA2-205ENST00000580541 TRIM44Q96DX7 344 aaPredicted RBP14.99□□□□□ -0.01
SKA2-205ENST00000580541 OLA1Q9NTK5 396 aaKnown RBP14.99□□□□□ -0.01
SKA2-205ENST00000580541 SPTLC3Q9NUV7 552 aa14.99□□□□□ -0.01
SKA2-205ENST00000580541 RRN3Q9NYV6 651 aa14.99□□□□□ -0.01
SKA2-205ENST00000580541 TAS2R14Q9NYV8 317 aa14.99□□□□□ -0.01
SKA2-205ENST00000580541 CLIC5Q9NZA1 410 aa14.99□□□□□ -0.01
SKA2-205ENST00000580541 CHORDC1Q9UHD1 332 aaPredicted RBP14.99□□□□□ -0.01
SKA2-205ENST00000580541 CD207Q9UJ71 328 aa14.99□□□□□ -0.01
SKA2-205ENST00000580541 FAM50BQ9Y247 325 aa14.99□□□□□ -0.01
SKA2-205ENST00000580541 SIGLEC16A6NMB1 481 aa14.98□□□□□ -0.01
SKA2-205ENST00000580541 PIK3R2O00459 728 aa14.98□□□□□ -0.01
SKA2-205ENST00000580541 PAPSS1O43252 624 aaPredicted RBP14.98□□□□□ -0.01
SKA2-205ENST00000580541 ABL1P00519 1130 aa14.98□□□□□ -0.01
SKA2-205ENST00000580541 ERBB2P04626 1255 aa14.98□□□□□ -0.01
SKA2-205ENST00000580541 TMEM253P0C7T8 217 aa14.98□□□□□ -0.01
SKA2-205ENST00000580541 KRT3P12035 628 aa14.98□□□□□ -0.01
SKA2-205ENST00000580541 MYL4P12829 197 aa14.98□□□□□ -0.01
SKA2-205ENST00000580541 GABRR2P28476 465 aa14.98□□□□□ -0.01
SKA2-205ENST00000580541 TUBP50607 506 aa14.98□□□□□ -0.01
SKA2-205ENST00000580541 GALCP54803 685 aa14.98□□□□□ -0.01
SKA2-205ENST00000580541 YWHAGP61981 247 aaKnown RBP eCLIP14.98□□□□□ -0.01
SKA2-205ENST00000580541 USP46P62068 366 aa14.98□□□□□ -0.01
SKA2-205ENST00000580541 MTMR3Q13615 1198 aa14.98□□□□□ -0.01
SKA2-205ENST00000580541 FAM102AQ5T9C2 384 aaPredicted RBP14.98□□□□□ -0.01
SKA2-205ENST00000580541 DNAJC24Q6P3W2 148 aa14.98□□□□□ -0.01
SKA2-205ENST00000580541 DCUN1D2Q6PH85 259 aa14.98□□□□□ -0.01
SKA2-205ENST00000580541 SYCE2Q6PIF2 218 aa14.98□□□□□ -0.01
SKA2-205ENST00000580541 SLC26A9Q7LBE3 791 aa14.98□□□□□ -0.01
SKA2-205ENST00000580541 GPRIN1Q7Z2K8 1008 aa14.98□□□□□ -0.01
SKA2-205ENST00000580541 GRASPQ7Z6J2 395 aaPredicted RBP14.98□□□□□ -0.01
SKA2-205ENST00000580541 PPM1EQ8WY54 764 aa14.98□□□□□ -0.01
SKA2-205ENST00000580541 ZNF707Q96C28 371 aaPredicted RBP14.98□□□□□ -0.01
SKA2-205ENST00000580541 ZNF653Q96CK0 615 aa14.98□□□□□ -0.01
SKA2-205ENST00000580541 MCRS1Q96EZ8 462 aa14.98□□□□□ -0.01
SKA2-205ENST00000580541 ATXN3LQ9H3M9 355 aa14.98□□□□□ -0.01
SKA2-205ENST00000580541 POPDC2Q9HBU9 364 aa14.98□□□□□ -0.01
SKA2-205ENST00000580541 CLEC1BQ9P126 229 aa14.98□□□□□ -0.01
SKA2-205ENST00000580541 DNMT3BQ9UBC3 853 aaKnown RBP14.98□□□□□ -0.01
SKA2-205ENST00000580541 CNOT8Q9UFF9 292 aaKnown RBP14.98□□□□□ -0.01
SKA2-205ENST00000580541 MRPS23Q9Y3D9 190 aaKnown RBP14.98□□□□□ -0.01
SKA2-205ENST00000580541 ZNF638Q14966 1978 aaKnown RBP14.98□□□□□ -0.01
SKA2-205ENST00000580541 GREB1Q4ZG55 1949 aa14.98□□□□□ -0.01
SKA2-205ENST00000580541 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.97□□□□□ -0.01
SKA2-205ENST00000580541 ZNF840PA6NDX5 716 aa14.97□□□□□ -0.01
SKA2-205ENST00000580541 LTFP02788 710 aa14.97□□□□□ -0.01
SKA2-205ENST00000580541 F11P03951 625 aa14.97□□□□□ -0.01
SKA2-205ENST00000580541 CCDC175P0C221 793 aa14.97□□□□□ -0.01
SKA2-205ENST00000580541 ABCB4P21439 1286 aa14.97□□□□□ -0.01
SKA2-205ENST00000580541 RBM10P98175 930 aaKnown RBP14.97□□□□□ -0.01
SKA2-205ENST00000580541 KIF5AQ12840 1032 aa14.97□□□□□ -0.01
SKA2-205ENST00000580541 PTP4A2Q12974 167 aa14.97□□□□□ -0.01
SKA2-205ENST00000580541 PUS10Q3MIT2 529 aaKnown RBP14.97□□□□□ -0.01
SKA2-205ENST00000580541 HECTD3Q5T447 861 aa14.97□□□□□ -0.01
SKA2-205ENST00000580541 BSPRYQ5W0U4 402 aa14.97□□□□□ -0.01
SKA2-205ENST00000580541 OLFML1Q6UWY5 402 aa14.97□□□□□ -0.01
SKA2-205ENST00000580541 RAD9BQ6WBX8 426 aa14.97□□□□□ -0.01
SKA2-205ENST00000580541 FAM183BPQ6ZVS7 135 aa14.97□□□□□ -0.01
SKA2-205ENST00000580541 RSRC2Q7L4I2 434 aaKnown RBP14.97□□□□□ -0.01
SKA2-205ENST00000580541 RHOT2Q8IXI1 618 aa14.97□□□□□ -0.01
SKA2-205ENST00000580541 NCAPGQ9BPX3 1015 aa14.97□□□□□ -0.01
SKA2-205ENST00000580541 TSGA10Q9BZW7 698 aa14.97□□□□□ -0.01
SKA2-205ENST00000580541 NACA2Q9H009 215 aa14.97□□□□□ -0.01
SKA2-205ENST00000580541 S1PR5Q9H228 398 aa14.97□□□□□ -0.01
SKA2-205ENST00000580541 UBE2ZQ9H832 354 aaPredicted RBP14.97□□□□□ -0.01
SKA2-205ENST00000580541 WDR6Q9NNW5 1121 aaKnown RBP14.97□□□□□ -0.01
SKA2-205ENST00000580541 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.97□□□□□ -0.01
SKA2-205ENST00000580541 GMIPQ9P107 970 aa14.97□□□□□ -0.01
SKA2-205ENST00000580541 UVRAGQ9P2Y5 699 aa14.97□□□□□ -0.01
SKA2-205ENST00000580541 STAP1Q9ULZ2 295 aa14.97□□□□□ -0.01
SKA2-205ENST00000580541 NENFQ9UMX5 172 aa14.97□□□□□ -0.01
SKA2-205ENST00000580541 YJEFN3A6XGL0 299 aa14.96□□□□□ -0.01
SKA2-205ENST00000580541 E7ENQ6 273 aa14.96□□□□□ -0.01
SKA2-205ENST00000580541 GOLGA8SH3BPF8 625 aa14.96□□□□□ -0.01
SKA2-205ENST00000580541 CCP110O43303 1012 aa14.96□□□□□ -0.01
SKA2-205ENST00000580541 ZSCAN12O43309 604 aa14.96□□□□□ -0.01
SKA2-205ENST00000580541 TBX10O75333 385 aa14.96□□□□□ -0.01
SKA2-205ENST00000580541 CYP1A2P05177 515 aa14.96□□□□□ -0.01
SKA2-205ENST00000580541 ZDHHC11BP0C7U3 371 aa14.96□□□□□ -0.01
SKA2-205ENST00000580541 RRM1P23921 792 aa14.96□□□□□ -0.01
SKA2-205ENST00000580541 FSHRP23945 695 aa14.96□□□□□ -0.01
SKA2-205ENST00000580541 GBP1P32455 592 aa14.96□□□□□ -0.01
SKA2-205ENST00000580541 ATP5C1P36542 298 aaKnown RBP14.96□□□□□ -0.01
SKA2-205ENST00000580541 LTBRP36941 435 aa14.96□□□□□ -0.01
SKA2-205ENST00000580541 KPNA1P52294 538 aaPredicted RBP14.96□□□□□ -0.01
SKA2-205ENST00000580541 RNASE9P60153 205 aaKnown RBP14.96□□□□□ -0.01
SKA2-205ENST00000580541 CCZ1BP86790 482 aa14.96□□□□□ -0.01
SKA2-205ENST00000580541 CCZ1P86791 482 aaPredicted RBP14.96□□□□□ -0.01
SKA2-205ENST00000580541 IFI16Q16666 785 aaKnown RBP14.96□□□□□ -0.01
SKA2-205ENST00000580541 HS1BP3Q53T59 392 aa14.96□□□□□ -0.01
SKA2-205ENST00000580541 PLEKHA7Q6IQ23 1121 aa14.96□□□□□ -0.01
SKA2-205ENST00000580541 KLHDC10Q6PID8 442 aa14.96□□□□□ -0.01
SKA2-205ENST00000580541 TMC8Q8IU68 726 aa14.96□□□□□ -0.01
SKA2-205ENST00000580541 HS6ST3Q8IZP7 471 aa14.96□□□□□ -0.01
SKA2-205ENST00000580541 OLIG1Q8TAK6 271 aa14.96□□□□□ -0.01
SKA2-205ENST00000580541 MSLNLQ96KJ4 702 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms