RNA–Protein interactions for RNA: ENST00000580498.5

SMG8-204, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 5

Gene SMG8, Length 785 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-204ENST00000580498 NAGPAQ9UK23 515 aa21.23■□□□□ 0.99
SMG8-204ENST00000580498 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.23■□□□□ 0.99
SMG8-204ENST00000580498 FAM186AA6NE01 2351 aa21.23■□□□□ 0.99
SMG8-204ENST00000580498 OTOL1A6NHN0 477 aaPredicted RBP21.22■□□□□ 0.99
SMG8-204ENST00000580498 PMM2O15305 246 aa21.22■□□□□ 0.99
SMG8-204ENST00000580498 RNF40O75150 1001 aa21.22■□□□□ 0.99
SMG8-204ENST00000580498 BCAT1P54687 386 aa21.22■□□□□ 0.99
SMG8-204ENST00000580498 TPD52L1Q16890 204 aaPredicted RBP21.22■□□□□ 0.99
SMG8-204ENST00000580498 ARHGAP17Q68EM7 881 aa21.22■□□□□ 0.99
SMG8-204ENST00000580498 TTI2Q6NXR4 508 aa21.22■□□□□ 0.99
SMG8-204ENST00000580498 WHAMMQ8TF30 809 aa21.22■□□□□ 0.99
SMG8-204ENST00000580498 TATDN2Q93075 761 aa21.22■□□□□ 0.99
SMG8-204ENST00000580498 UBXN6Q9BZV1 441 aa21.22■□□□□ 0.99
SMG8-204ENST00000580498 EPC1Q9H2F5 836 aa21.22■□□□□ 0.99
SMG8-204ENST00000580498 KIAA1468Q9P260 1216 aa21.22■□□□□ 0.99
SMG8-204ENST00000580498 DNMT3LQ9UJW3 386 aa21.22■□□□□ 0.99
SMG8-204ENST00000580498 SMG5Q9UPR3 1016 aaKnown RBP21.22■□□□□ 0.99
SMG8-204ENST00000580498 PPP1R3GB7ZBB8 358 aa21.21■□□□□ 0.99
SMG8-204ENST00000580498 LILRB5O75023 590 aa21.21■□□□□ 0.99
SMG8-204ENST00000580498 EGFP01133 1207 aa21.21■□□□□ 0.99
SMG8-204ENST00000580498 APODP05090 189 aa21.21■□□□□ 0.99
SMG8-204ENST00000580498 ADH5P11766 374 aa21.21■□□□□ 0.99
SMG8-204ENST00000580498 CD44P16070 742 aaKnown RBP21.21■□□□□ 0.99
SMG8-204ENST00000580498 HOXA6P31267 233 aa21.21■□□□□ 0.99
SMG8-204ENST00000580498 EIF2DP41214 584 aaKnown RBP21.21■□□□□ 0.99
SMG8-204ENST00000580498 RAD23BP54727 409 aa21.21■□□□□ 0.99
SMG8-204ENST00000580498 GAD2Q05329 585 aa21.21■□□□□ 0.99
SMG8-204ENST00000580498 LRMPQ12912 555 aa21.21■□□□□ 0.99
SMG8-204ENST00000580498 DHCR24Q15392 516 aa21.21■□□□□ 0.99
SMG8-204ENST00000580498 C10orf120Q5SQS8 335 aa21.21■□□□□ 0.99
SMG8-204ENST00000580498 KLHDC10Q6PID8 442 aa21.21■□□□□ 0.99
SMG8-204ENST00000580498 PPM1KQ8N3J5 372 aa21.21■□□□□ 0.99
SMG8-204ENST00000580498 ANKRD52Q8NB46 1076 aa21.21■□□□□ 0.99
SMG8-204ENST00000580498 SLC4A11Q8NBS3 891 aa21.21■□□□□ 0.99
SMG8-204ENST00000580498 CHFRQ96EP1 664 aa21.21■□□□□ 0.99
SMG8-204ENST00000580498 LRRC4Q9HBW1 653 aa21.21■□□□□ 0.99
SMG8-204ENST00000580498 CYLDQ9NQC7 956 aa21.21■□□□□ 0.99
SMG8-204ENST00000580498 RIF1Q5UIP0 2472 aaKnown RBP21.2■□□□□ 0.98
SMG8-204ENST00000580498 CHURC1-FNTBB4DL54 471 aa21.2■□□□□ 0.98
SMG8-204ENST00000580498 CYP26A1O43174 497 aa21.2■□□□□ 0.98
SMG8-204ENST00000580498 CYP17A1P05093 508 aa21.2■□□□□ 0.98
SMG8-204ENST00000580498 IRF1P10914 325 aa21.2■□□□□ 0.98
SMG8-204ENST00000580498 VDRP11473 427 aa21.2■□□□□ 0.98
SMG8-204ENST00000580498 RARGP13631 454 aa21.2■□□□□ 0.98
SMG8-204ENST00000580498 PLA2G4AP47712 749 aa21.2■□□□□ 0.98
SMG8-204ENST00000580498 KIF11P52732 1056 aa21.2■□□□□ 0.98
SMG8-204ENST00000580498 STX17P56962 302 aa21.2■□□□□ 0.98
SMG8-204ENST00000580498 GAS6Q14393 721 aa21.2■□□□□ 0.98
SMG8-204ENST00000580498 STILQ15468 1287 aa21.2■□□□□ 0.98
SMG8-204ENST00000580498 CAMK4Q16566 473 aa21.2■□□□□ 0.98
SMG8-204ENST00000580498 PRR23BQ6ZRT6 265 aa21.2■□□□□ 0.98
SMG8-204ENST00000580498 CEP68Q76N32 757 aa21.2■□□□□ 0.98
SMG8-204ENST00000580498 RSRC2Q7L4I2 434 aaKnown RBP21.2■□□□□ 0.98
SMG8-204ENST00000580498 CCDC186Q7Z3E2 898 aa21.2■□□□□ 0.98
SMG8-204ENST00000580498 CREBRFQ8IUR6 639 aa21.2■□□□□ 0.98
SMG8-204ENST00000580498 ADGRG2Q8IZP9 1017 aa21.2■□□□□ 0.98
SMG8-204ENST00000580498 CAMKK1Q8N5S9 505 aa21.2■□□□□ 0.98
SMG8-204ENST00000580498 FAM81BQ96LP2 452 aa21.2■□□□□ 0.98
SMG8-204ENST00000580498 PNKPQ96T60 521 aa21.2■□□□□ 0.98
SMG8-204ENST00000580498 ARID3AQ99856 593 aa21.2■□□□□ 0.98
SMG8-204ENST00000580498 DUSP9Q99956 384 aaKnown RBP21.2■□□□□ 0.98
SMG8-204ENST00000580498 SRRTQ9BXP5 876 aaKnown RBP21.2■□□□□ 0.98
SMG8-204ENST00000580498 DACH1Q9UI36 760 aa21.2■□□□□ 0.98
SMG8-204ENST00000580498 STRIP2Q9ULQ0 834 aa21.2■□□□□ 0.98
SMG8-204ENST00000580498 AFPP02771 609 aaKnown RBP21.19■□□□□ 0.98
SMG8-204ENST00000580498 FNTBP49356 437 aa21.19■□□□□ 0.98
SMG8-204ENST00000580498 BST2Q10589 180 aaKnown RBP21.19■□□□□ 0.98
SMG8-204ENST00000580498 SIM2Q14190 667 aaPredicted RBP21.19■□□□□ 0.98
SMG8-204ENST00000580498 GOLGA7BQ2TAP0 167 aa21.19■□□□□ 0.98
SMG8-204ENST00000580498 HEATR6Q6AI08 1181 aaKnown RBP21.19■□□□□ 0.98
SMG8-204ENST00000580498 RPLP0P6Q8NHW5 317 aa21.19■□□□□ 0.98
SMG8-204ENST00000580498 IPO9Q96P70 1041 aaKnown RBP21.19■□□□□ 0.98
SMG8-204ENST00000580498 CLIC5Q9NZA1 410 aa21.19■□□□□ 0.98
SMG8-204ENST00000580498 RWDD2AQ9UIY3 292 aa21.19■□□□□ 0.98
SMG8-204ENST00000580498 ZNF510Q9Y2H8 683 aa21.19■□□□□ 0.98
SMG8-204ENST00000580498 PCDHB4Q9Y5E5 795 aa21.19■□□□□ 0.98
SMG8-204ENST00000580498 CCDC163A0A0D9SF12 145 aa21.18■□□□□ 0.98
SMG8-204ENST00000580498 A0A1W2PQH9 124 aa21.18■□□□□ 0.98
SMG8-204ENST00000580498 HHLA1C9JL84 531 aa21.18■□□□□ 0.98
SMG8-204ENST00000580498 PAEPP09466 180 aa21.18■□□□□ 0.98
SMG8-204ENST00000580498 SETSIPP0DME0 302 aa21.18■□□□□ 0.98
SMG8-204ENST00000580498 TDGF1P13385 188 aa21.18■□□□□ 0.98
SMG8-204ENST00000580498 COG7P83436 770 aa21.18■□□□□ 0.98
SMG8-204ENST00000580498 ZXDBP98169 803 aa21.18■□□□□ 0.98
SMG8-204ENST00000580498 KCNH2Q12809 1159 aa21.18■□□□□ 0.98
SMG8-204ENST00000580498 ANO4Q32M45 955 aa21.18■□□□□ 0.98
SMG8-204ENST00000580498 LAIR1Q6GTX8 287 aa21.18■□□□□ 0.98
SMG8-204ENST00000580498 TMEM270Q6UE05 265 aa21.18■□□□□ 0.98
SMG8-204ENST00000580498 GPRIN1Q7Z2K8 1008 aa21.18■□□□□ 0.98
SMG8-204ENST00000580498 WDR5BQ86VZ2 330 aa21.18■□□□□ 0.98
SMG8-204ENST00000580498 SIX6OS1Q8N1H7 587 aa21.18■□□□□ 0.98
SMG8-204ENST00000580498 MLKLQ8NB16 471 aa21.18■□□□□ 0.98
SMG8-204ENST00000580498 SUMF1Q8NBK3 374 aa21.18■□□□□ 0.98
SMG8-204ENST00000580498 XPO6Q96QU8 1125 aaKnown RBP21.18■□□□□ 0.98
SMG8-204ENST00000580498 TSPAN16Q9UKR8 245 aa21.18■□□□□ 0.98
SMG8-204ENST00000580498 XPO1O14980 1071 aaKnown RBP21.17■□□□□ 0.98
SMG8-204ENST00000580498 MARSP56192 900 aaKnown RBP21.17■□□□□ 0.98
SMG8-204ENST00000580498 HSF5Q4G112 596 aaPredicted RBP21.17■□□□□ 0.98
SMG8-204ENST00000580498 SYT13Q7L8C5 426 aa21.17■□□□□ 0.98
SMG8-204ENST00000580498 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms