RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 GPR161Q8N6U8 529 aaKnown RBP19.41■□□□□ 0.7
PRKCA-203ENST00000578063 MAIP1Q8WWC4 291 aa19.41■□□□□ 0.7
PRKCA-203ENST00000578063 NDRG1Q92597 394 aaKnown RBP19.41■□□□□ 0.7
PRKCA-203ENST00000578063 CENPIQ92674 756 aaPredicted RBP19.41■□□□□ 0.7
PRKCA-203ENST00000578063 DPF3Q92784 378 aa19.41■□□□□ 0.7
PRKCA-203ENST00000578063 PATJQ8NI35 1801 aa19.41■□□□□ 0.7
PRKCA-203ENST00000578063 YJEFN3A6XGL0 299 aa19.4■□□□□ 0.7
PRKCA-203ENST00000578063 E7ENQ6 273 aa19.4■□□□□ 0.7
PRKCA-203ENST00000578063 TNFRSF10BO14763 440 aa19.4■□□□□ 0.7
PRKCA-203ENST00000578063 TRUB2O95900 331 aaKnown RBP19.4■□□□□ 0.7
PRKCA-203ENST00000578063 LTFP02788 710 aa19.4■□□□□ 0.7
PRKCA-203ENST00000578063 URODP06132 367 aa19.4■□□□□ 0.7
PRKCA-203ENST00000578063 IL1R2P27930 398 aa19.4■□□□□ 0.7
PRKCA-203ENST00000578063 PPP2R5EQ16537 467 aa19.4■□□□□ 0.7
PRKCA-203ENST00000578063 SLC25A52Q3SY17 297 aa19.4■□□□□ 0.7
PRKCA-203ENST00000578063 GPR65Q8IYL9 337 aa19.4■□□□□ 0.7
PRKCA-203ENST00000578063 ATAD1Q8NBU5 361 aa19.4■□□□□ 0.7
PRKCA-203ENST00000578063 TBCBQ99426 244 aa19.4■□□□□ 0.7
PRKCA-203ENST00000578063 RAD9AQ99638 391 aa19.4■□□□□ 0.7
PRKCA-203ENST00000578063 ZWILCHQ9H900 591 aa19.4■□□□□ 0.7
PRKCA-203ENST00000578063 RRN3Q9NYV6 651 aa19.4■□□□□ 0.7
PRKCA-203ENST00000578063 MTUS1Q9ULD2 1270 aa19.4■□□□□ 0.7
PRKCA-203ENST00000578063 CAPN9O14815 690 aa19.39■□□□□ 0.7
PRKCA-203ENST00000578063 PTPN7P35236 360 aa19.39■□□□□ 0.7
PRKCA-203ENST00000578063 ROR1Q01973 937 aa19.39■□□□□ 0.7
PRKCA-203ENST00000578063 DCAF6Q58WW2 860 aa19.39■□□□□ 0.7
PRKCA-203ENST00000578063 SH3PXD2AQ5TCZ1 1133 aa19.39■□□□□ 0.7
PRKCA-203ENST00000578063 TXNRD3NBQ6F5E7 133 aa19.39■□□□□ 0.7
PRKCA-203ENST00000578063 BHLHA9Q7RTU4 235 aa19.39■□□□□ 0.7
PRKCA-203ENST00000578063 SP7Q8TDD2 431 aaPredicted RBP19.39■□□□□ 0.7
PRKCA-203ENST00000578063 CLP1Q92989 425 aaKnown RBP19.39■□□□□ 0.7
PRKCA-203ENST00000578063 NT5C3BQ969T7 300 aa19.39■□□□□ 0.7
PRKCA-203ENST00000578063 ABHD8Q96I13 439 aa19.39■□□□□ 0.7
PRKCA-203ENST00000578063 SLITRK1Q96PX8 696 aa19.39■□□□□ 0.7
PRKCA-203ENST00000578063 AP1M1Q9BXS5 423 aa19.39■□□□□ 0.7
PRKCA-203ENST00000578063 PCSK1NQ9UHG2 260 aa19.39■□□□□ 0.7
PRKCA-203ENST00000578063 FSCN2O14926 492 aa19.39■□□□□ 0.69
PRKCA-203ENST00000578063 ATP2A2P16615 1042 aaKnown RBP19.39■□□□□ 0.69
PRKCA-203ENST00000578063 SULT1E1P49888 294 aa19.39■□□□□ 0.69
PRKCA-203ENST00000578063 HDAC4P56524 1084 aa19.39■□□□□ 0.69
PRKCA-203ENST00000578063 KRT17Q04695 432 aa19.39■□□□□ 0.69
PRKCA-203ENST00000578063 ATP13A4Q4VNC1 1196 aa19.39■□□□□ 0.69
PRKCA-203ENST00000578063 GLE1Q53GS7 698 aaKnown RBP19.39■□□□□ 0.69
PRKCA-203ENST00000578063 BOLA3Q53S33 107 aa19.39■□□□□ 0.69
PRKCA-203ENST00000578063 RNF19BQ6ZMZ0 732 aa19.39■□□□□ 0.69
PRKCA-203ENST00000578063 HFE2Q6ZVN8 426 aa19.39■□□□□ 0.69
PRKCA-203ENST00000578063 BEND5Q7L4P6 421 aa19.39■□□□□ 0.69
PRKCA-203ENST00000578063 NUP93Q8N1F7 819 aa19.39■□□□□ 0.69
PRKCA-203ENST00000578063 TEKT4Q8WW24 435 aa19.39■□□□□ 0.69
PRKCA-203ENST00000578063 TSC1Q92574 1164 aa19.39■□□□□ 0.69
PRKCA-203ENST00000578063 NPY6RQ99463 290 aa19.39■□□□□ 0.69
PRKCA-203ENST00000578063 OSBPL8Q9BZF1 889 aa19.39■□□□□ 0.69
PRKCA-203ENST00000578063 FBXO44Q9H4M3 255 aa19.39■□□□□ 0.69
PRKCA-203ENST00000578063 KLHL11Q9NVR0 708 aa19.39■□□□□ 0.69
PRKCA-203ENST00000578063 WDR27A2RRH5 827 aa19.38■□□□□ 0.69
PRKCA-203ENST00000578063 LRRD1A4D1F6 860 aa19.38■□□□□ 0.69
PRKCA-203ENST00000578063 C2CD2LO14523 706 aa19.38■□□□□ 0.69
PRKCA-203ENST00000578063 HAPLN1P10915 354 aaPredicted RBP19.38■□□□□ 0.69
PRKCA-203ENST00000578063 OR1D2P34982 312 aa19.38■□□□□ 0.69
PRKCA-203ENST00000578063 RPL10AP62906 217 aaKnown RBP19.38■□□□□ 0.69
PRKCA-203ENST00000578063 SMTNL2Q2TAL5 461 aa19.38■□□□□ 0.69
PRKCA-203ENST00000578063 C8orf74Q6P047 294 aa19.38■□□□□ 0.69
PRKCA-203ENST00000578063 SCAMP5Q8TAC9 235 aa19.38■□□□□ 0.69
PRKCA-203ENST00000578063 RNF25Q96BH1 459 aaPredicted RBP19.38■□□□□ 0.69
PRKCA-203ENST00000578063 CEP295NLQ96MC4 621 aa19.38■□□□□ 0.69
PRKCA-203ENST00000578063 PEBP4Q96S96 227 aa19.38■□□□□ 0.69
PRKCA-203ENST00000578063 TLL1O43897 1013 aa19.37■□□□□ 0.69
PRKCA-203ENST00000578063 FGF18O76093 207 aa19.37■□□□□ 0.69
PRKCA-203ENST00000578063 VNN2O95498 520 aa19.37■□□□□ 0.69
PRKCA-203ENST00000578063 LINC00271P0C7V0 271 aa19.37■□□□□ 0.69
PRKCA-203ENST00000578063 RARAP10276 462 aa19.37■□□□□ 0.69
PRKCA-203ENST00000578063 RALAP11233 206 aa19.37■□□□□ 0.69
PRKCA-203ENST00000578063 CREMQ03060 361 aa19.37■□□□□ 0.69
PRKCA-203ENST00000578063 DDR2Q16832 855 aa19.37■□□□□ 0.69
PRKCA-203ENST00000578063 MGAT5BQ3V5L5 792 aa19.37■□□□□ 0.69
PRKCA-203ENST00000578063 KCNT1Q5JUK3 1230 aa19.37■□□□□ 0.69
PRKCA-203ENST00000578063 SPOCD1Q6ZMY3 1216 aa19.37■□□□□ 0.69
PRKCA-203ENST00000578063 CYP4V2Q6ZWL3 525 aaPredicted RBP19.37■□□□□ 0.69
PRKCA-203ENST00000578063 BNIPLQ7Z465 357 aa19.37■□□□□ 0.69
PRKCA-203ENST00000578063 VPS52Q8N1B4 723 aa19.37■□□□□ 0.69
PRKCA-203ENST00000578063 CMASQ8NFW8 434 aaPredicted RBP19.37■□□□□ 0.69
PRKCA-203ENST00000578063 RAPGEF5Q92565 580 aa19.37■□□□□ 0.69
PRKCA-203ENST00000578063 SPATA17Q96L03 361 aa19.37■□□□□ 0.69
PRKCA-203ENST00000578063 KRT12Q99456 494 aa19.37■□□□□ 0.69
PRKCA-203ENST00000578063 SEPT5Q99719 369 aaPredicted RBP19.37■□□□□ 0.69
PRKCA-203ENST00000578063 SLITRK6Q9H5Y7 841 aa19.37■□□□□ 0.69
PRKCA-203ENST00000578063 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.37■□□□□ 0.69
PRKCA-203ENST00000578063 HSFX1Q9UBD0 423 aa19.37■□□□□ 0.69
PRKCA-203ENST00000578063 AFF4Q9UHB7 1163 aaKnown RBP19.37■□□□□ 0.69
PRKCA-203ENST00000578063 TARSL2A2RTX5 802 aaKnown RBP19.37■□□□□ 0.69
PRKCA-203ENST00000578063 MDM4O15151 490 aa19.37■□□□□ 0.69
PRKCA-203ENST00000578063 ADAM12O43184 909 aa19.37■□□□□ 0.69
PRKCA-203ENST00000578063 ENDOD1O94919 500 aa19.37■□□□□ 0.69
PRKCA-203ENST00000578063 RTN3O95197 1032 aaPredicted RBP19.37■□□□□ 0.69
PRKCA-203ENST00000578063 FYNP06241 537 aa19.37■□□□□ 0.69
PRKCA-203ENST00000578063 TUBBP07437 444 aa19.37■□□□□ 0.69
PRKCA-203ENST00000578063 RHOXF2BP0C7M4 288 aa19.37■□□□□ 0.69
PRKCA-203ENST00000578063 NCAM1P13591 858 aa19.37■□□□□ 0.69
PRKCA-203ENST00000578063 TFE3P19532 575 aaPredicted RBP19.37■□□□□ 0.69
PRKCA-203ENST00000578063 RDXP35241 583 aaKnown RBP19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms