RNA–Protein interactions for RNA: ENST00000578044.5

SMARCE1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,184 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-213ENST00000578044 SMOQ99835 787 aa15.34■□□□□ 0.05
SMARCE1-213ENST00000578044 KRT82Q9NSB4 513 aa15.34■□□□□ 0.05
SMARCE1-213ENST00000578044 MMP17Q9ULZ9 603 aa15.34■□□□□ 0.05
SMARCE1-213ENST00000578044 USP18Q9UMW8 372 aa15.34■□□□□ 0.05
SMARCE1-213ENST00000578044 EPG5Q9HCE0 2579 aa15.33■□□□□ 0.05
SMARCE1-213ENST00000578044 GON4LQ3T8J9 2241 aa15.33■□□□□ 0.05
SMARCE1-213ENST00000578044 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.33■□□□□ 0.04
SMARCE1-213ENST00000578044 FAM200BP0CF97 657 aa15.33■□□□□ 0.04
SMARCE1-213ENST00000578044 MBL2P11226 248 aaPredicted RBP15.33■□□□□ 0.04
SMARCE1-213ENST00000578044 GRIA2P42262 883 aa15.33■□□□□ 0.04
SMARCE1-213ENST00000578044 PI4KAP42356 2102 aa15.33■□□□□ 0.04
SMARCE1-213ENST00000578044 ATXN1P54253 815 aaKnown RBP15.33■□□□□ 0.04
SMARCE1-213ENST00000578044 GAD2Q05329 585 aa15.33■□□□□ 0.04
SMARCE1-213ENST00000578044 PPP3CAQ08209 521 aa15.33■□□□□ 0.04
SMARCE1-213ENST00000578044 SPEM2Q0P670 501 aa15.33■□□□□ 0.04
SMARCE1-213ENST00000578044 NUDT18Q6ZVK8 323 aa15.33■□□□□ 0.04
SMARCE1-213ENST00000578044 ETFBKMTQ8IXQ9 262 aa15.33■□□□□ 0.04
SMARCE1-213ENST00000578044 FMR1NBQ8N0W7 255 aaPredicted RBP15.33■□□□□ 0.04
SMARCE1-213ENST00000578044 SCAMP5Q8TAC9 235 aa15.33■□□□□ 0.04
SMARCE1-213ENST00000578044 SLC2A14Q8TDB8 520 aa15.33■□□□□ 0.04
SMARCE1-213ENST00000578044 CNOT6LQ96LI5 555 aaKnown RBP15.33■□□□□ 0.04
SMARCE1-213ENST00000578044 CDK5RAP1Q96SZ6 601 aaKnown RBP15.33■□□□□ 0.04
SMARCE1-213ENST00000578044 MED10Q9BTT4 135 aa15.33■□□□□ 0.04
SMARCE1-213ENST00000578044 CFAP97Q9P2B7 532 aa15.33■□□□□ 0.04
SMARCE1-213ENST00000578044 COQ4Q9Y3A0 265 aa15.33■□□□□ 0.04
SMARCE1-213ENST00000578044 STARD13Q9Y3M8 1113 aa15.33■□□□□ 0.04
SMARCE1-213ENST00000578044 HHLA1C9JL84 531 aa15.32■□□□□ 0.04
SMARCE1-213ENST00000578044 CETN3O15182 167 aa15.32■□□□□ 0.04
SMARCE1-213ENST00000578044 PMM2O15305 246 aa15.32■□□□□ 0.04
SMARCE1-213ENST00000578044 SLC16A3O15427 465 aaKnown RBP15.32■□□□□ 0.04
SMARCE1-213ENST00000578044 TLR5O60602 858 aa15.32■□□□□ 0.04
SMARCE1-213ENST00000578044 RHOBTB1O94844 696 aa15.32■□□□□ 0.04
SMARCE1-213ENST00000578044 PRR29P0C7W0 189 aa15.32■□□□□ 0.04
SMARCE1-213ENST00000578044 ADH5P11766 374 aa15.32■□□□□ 0.04
SMARCE1-213ENST00000578044 PPP1R2P41236 205 aa15.32■□□□□ 0.04
SMARCE1-213ENST00000578044 NUCB2P80303 420 aa15.32■□□□□ 0.04
SMARCE1-213ENST00000578044 CRY1Q16526 586 aa15.32■□□□□ 0.04
SMARCE1-213ENST00000578044 PLK5Q496M5 336 aa15.32■□□□□ 0.04
SMARCE1-213ENST00000578044 SPDYCQ5MJ68 293 aa15.32■□□□□ 0.04
SMARCE1-213ENST00000578044 HEATR6Q6AI08 1181 aaKnown RBP15.32■□□□□ 0.04
SMARCE1-213ENST00000578044 CLEC20AQ6ZU45 233 aa15.32■□□□□ 0.04
SMARCE1-213ENST00000578044 CCDC186Q7Z3E2 898 aa15.32■□□□□ 0.04
SMARCE1-213ENST00000578044 TADA2BQ86TJ2 420 aa15.32■□□□□ 0.04
SMARCE1-213ENST00000578044 PHTF2Q8N3S3 785 aa15.32■□□□□ 0.04
SMARCE1-213ENST00000578044 SPRYD3Q8NCJ5 442 aa15.32■□□□□ 0.04
SMARCE1-213ENST00000578044 FBXL13Q8NEE6 735 aa15.32■□□□□ 0.04
SMARCE1-213ENST00000578044 TAS1R2Q8TE23 839 aa15.32■□□□□ 0.04
SMARCE1-213ENST00000578044 CYFIP2Q96F07 1278 aa15.32■□□□□ 0.04
SMARCE1-213ENST00000578044 CLIC5Q9NZA1 410 aa15.32■□□□□ 0.04
SMARCE1-213ENST00000578044 MARK1Q9P0L2 795 aa15.32■□□□□ 0.04
SMARCE1-213ENST00000578044 CHORDC1Q9UHD1 332 aaPredicted RBP15.32■□□□□ 0.04
SMARCE1-213ENST00000578044 USP3Q9Y6I4 520 aa15.32■□□□□ 0.04
SMARCE1-213ENST00000578044 THADAQ6YHU6 1953 aa15.31■□□□□ 0.04
SMARCE1-213ENST00000578044 KAT7O95251 611 aa15.31■□□□□ 0.04
SMARCE1-213ENST00000578044 ABL1P00519 1130 aa15.31■□□□□ 0.04
SMARCE1-213ENST00000578044 APODP05090 189 aa15.31■□□□□ 0.04
SMARCE1-213ENST00000578044 CCDC192P0DO97 292 aa15.31■□□□□ 0.04
SMARCE1-213ENST00000578044 ATP5C1P36542 298 aaKnown RBP15.31■□□□□ 0.04
SMARCE1-213ENST00000578044 KIR2DL1P43626 348 aaPredicted RBP15.31■□□□□ 0.04
SMARCE1-213ENST00000578044 GCLMP48507 274 aa15.31■□□□□ 0.04
SMARCE1-213ENST00000578044 KIF11P52732 1056 aa15.31■□□□□ 0.04
SMARCE1-213ENST00000578044 FKBP3Q00688 224 aaKnown RBP15.31■□□□□ 0.04
SMARCE1-213ENST00000578044 LRRC63Q05C16 580 aa15.31■□□□□ 0.04
SMARCE1-213ENST00000578044 GOLGA8FQ08AF8 430 aa15.31■□□□□ 0.04
SMARCE1-213ENST00000578044 GOLGA8DPQ0D2H9 430 aa15.31■□□□□ 0.04
SMARCE1-213ENST00000578044 BECN1Q14457 450 aa15.31■□□□□ 0.04
SMARCE1-213ENST00000578044 ELF2Q15723 593 aa15.31■□□□□ 0.04
SMARCE1-213ENST00000578044 ZNF658Q5TYW1 1059 aaPredicted RBP15.31■□□□□ 0.04
SMARCE1-213ENST00000578044 SCARA5Q6ZMJ2 495 aa15.31■□□□□ 0.04
SMARCE1-213ENST00000578044 TRMT11Q7Z4G4 463 aaKnown RBP15.31■□□□□ 0.04
SMARCE1-213ENST00000578044 C12orf29Q8N999 325 aa15.31■□□□□ 0.04
SMARCE1-213ENST00000578044 OLIG1Q8TAK6 271 aa15.31■□□□□ 0.04
SMARCE1-213ENST00000578044 WHAMMQ8TF30 809 aa15.31■□□□□ 0.04
SMARCE1-213ENST00000578044 DUSP16Q9BY84 665 aa15.31■□□□□ 0.04
SMARCE1-213ENST00000578044 GOLPH3LQ9H4A5 285 aa15.31■□□□□ 0.04
SMARCE1-213ENST00000578044 APOBEC3GQ9HC16 384 aaKnown RBP15.31■□□□□ 0.04
SMARCE1-213ENST00000578044 SPHK2Q9NRA0 654 aa15.31■□□□□ 0.04
SMARCE1-213ENST00000578044 VPS45Q9NRW7 570 aa15.31■□□□□ 0.04
SMARCE1-213ENST00000578044 HOOK1Q9UJC3 728 aaKnown RBP15.31■□□□□ 0.04
SMARCE1-213ENST00000578044 SH3BP1Q9Y3L3 701 aa15.31■□□□□ 0.04
SMARCE1-213ENST00000578044 GREM1O60565 184 aa15.3■□□□□ 0.04
SMARCE1-213ENST00000578044 BEST1O76090 585 aa15.3■□□□□ 0.04
SMARCE1-213ENST00000578044 ALDH1A2O94788 518 aa15.3■□□□□ 0.04
SMARCE1-213ENST00000578044 EPB41P11171 864 aaKnown RBP15.3■□□□□ 0.04
SMARCE1-213ENST00000578044 CCDC130P13994 396 aa15.3■□□□□ 0.04
SMARCE1-213ENST00000578044 MXI1P50539 228 aa15.3■□□□□ 0.04
SMARCE1-213ENST00000578044 MAP3K7CLP57077 242 aa15.3■□□□□ 0.04
SMARCE1-213ENST00000578044 SRSF5Q13243 272 aaKnown RBP15.3■□□□□ 0.04
SMARCE1-213ENST00000578044 USP39Q53GS9 565 aaKnown RBP15.3■□□□□ 0.04
SMARCE1-213ENST00000578044 EOGTQ5NDL2 527 aa15.3■□□□□ 0.04
SMARCE1-213ENST00000578044 BTBD8Q5XKL5 378 aa15.3■□□□□ 0.04
SMARCE1-213ENST00000578044 ARHGAP17Q68EM7 881 aa15.3■□□□□ 0.04
SMARCE1-213ENST00000578044 NAIF1Q69YI7 327 aaPredicted RBP15.3■□□□□ 0.04
SMARCE1-213ENST00000578044 SMYD5Q6GMV2 418 aa15.3■□□□□ 0.04
SMARCE1-213ENST00000578044 ENGASEQ8NFI3 743 aa15.3■□□□□ 0.04
SMARCE1-213ENST00000578044 TSTD1Q8NFU3 115 aa15.3■□□□□ 0.04
SMARCE1-213ENST00000578044 KLF16Q9BXK1 252 aaPredicted RBP15.3■□□□□ 0.04
SMARCE1-213ENST00000578044 DUSP15Q9H1R2 295 aaPredicted RBP15.3■□□□□ 0.04
SMARCE1-213ENST00000578044 CCSER2Q9H7U1 834 aa15.3■□□□□ 0.04
SMARCE1-213ENST00000578044 RAB20Q9NX57 234 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms