RNA–Protein interactions for RNA: ENST00000577943.2

RN7SL560P-201, Transcript of RNA, 7SL, cytoplasmic 560, pseudogene, humanhuman

BASIC

Gene RN7SL560P, Length 264 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL560P-201ENST00000577943 FAM200BP0CF97 657 aa15.8■□□□□ 0.12
RN7SL560P-201ENST00000577943 ADH5P11766 374 aa15.8■□□□□ 0.12
RN7SL560P-201ENST00000577943 PSMC2P35998 433 aaKnown RBP15.8■□□□□ 0.12
RN7SL560P-201ENST00000577943 EIF2DP41214 584 aaKnown RBP15.8■□□□□ 0.12
RN7SL560P-201ENST00000577943 MRPS21P82921 87 aaKnown RBP15.8■□□□□ 0.12
RN7SL560P-201ENST00000577943 PPP3CAQ08209 521 aa15.8■□□□□ 0.12
RN7SL560P-201ENST00000577943 PLK5Q496M5 336 aa15.8■□□□□ 0.12
RN7SL560P-201ENST00000577943 CCDC33Q8N5R6 958 aa15.8■□□□□ 0.12
RN7SL560P-201ENST00000577943 CCDC150Q8NCX0 1101 aa15.8■□□□□ 0.12
RN7SL560P-201ENST00000577943 OTUB2Q96DC9 234 aa15.8■□□□□ 0.12
RN7SL560P-201ENST00000577943 CCDC34Q96HJ3 373 aa15.8■□□□□ 0.12
RN7SL560P-201ENST00000577943 ZC3H10Q96K80 434 aaKnown RBP15.8■□□□□ 0.12
RN7SL560P-201ENST00000577943 ZFRQ96KR1 1074 aaKnown RBP15.8■□□□□ 0.12
RN7SL560P-201ENST00000577943 NT5C1AQ9BXI3 368 aa15.8■□□□□ 0.12
RN7SL560P-201ENST00000577943 GDPD2Q9HCC8 539 aa15.8■□□□□ 0.12
RN7SL560P-201ENST00000577943 CSNK1G1Q9HCP0 422 aa15.8■□□□□ 0.12
RN7SL560P-201ENST00000577943 TLR8Q9NR97 1041 aaKnown RBP15.8■□□□□ 0.12
RN7SL560P-201ENST00000577943 MMP17Q9ULZ9 603 aa15.8■□□□□ 0.12
RN7SL560P-201ENST00000577943 CNOT1A5YKK6 2376 aaKnown RBP15.8■□□□□ 0.12
RN7SL560P-201ENST00000577943 ANTXRLA6NF34 631 aa15.79■□□□□ 0.12
RN7SL560P-201ENST00000577943 DCLK1O15075 740 aa15.79■□□□□ 0.12
RN7SL560P-201ENST00000577943 TLR5O60602 858 aa15.79■□□□□ 0.12
RN7SL560P-201ENST00000577943 RHOBTB1O94844 696 aa15.79■□□□□ 0.12
RN7SL560P-201ENST00000577943 KAT7O95251 611 aa15.79■□□□□ 0.12
RN7SL560P-201ENST00000577943 ZNF806P0C7X5 589 aa15.79■□□□□ 0.12
RN7SL560P-201ENST00000577943 IRF1P10914 325 aa15.79■□□□□ 0.12
RN7SL560P-201ENST00000577943 GBP1P32455 592 aa15.79■□□□□ 0.12
RN7SL560P-201ENST00000577943 GAD2Q05329 585 aa15.79■□□□□ 0.12
RN7SL560P-201ENST00000577943 KDSRQ06136 332 aa15.79■□□□□ 0.12
RN7SL560P-201ENST00000577943 SF3A2Q15428 464 aaKnown RBP15.79■□□□□ 0.12
RN7SL560P-201ENST00000577943 ELF2Q15723 593 aa15.79■□□□□ 0.12
RN7SL560P-201ENST00000577943 LY6G5CQ5SRR4 150 aa15.79■□□□□ 0.12
RN7SL560P-201ENST00000577943 BTBD8Q5XKL5 378 aa15.79■□□□□ 0.12
RN7SL560P-201ENST00000577943 C12orf40Q86WS4 652 aa15.79■□□□□ 0.12
RN7SL560P-201ENST00000577943 TAS1R2Q8TE23 839 aa15.79■□□□□ 0.12
RN7SL560P-201ENST00000577943 JAKMIP2Q96AA8 810 aa15.79■□□□□ 0.12
RN7SL560P-201ENST00000577943 CYFIP2Q96F07 1278 aa15.79■□□□□ 0.12
RN7SL560P-201ENST00000577943 HNRNPABQ99729 332 aaKnown RBP15.79■□□□□ 0.12
RN7SL560P-201ENST00000577943 TPSD1Q9BZJ3 242 aa15.79■□□□□ 0.12
RN7SL560P-201ENST00000577943 DNAI2Q9GZS0 605 aa15.79■□□□□ 0.12
RN7SL560P-201ENST00000577943 CYP3A43Q9HB55 503 aa15.79■□□□□ 0.12
RN7SL560P-201ENST00000577943 APOBEC3GQ9HC16 384 aaKnown RBP15.79■□□□□ 0.12
RN7SL560P-201ENST00000577943 ARHGEF4Q9NR80 690 aa15.79■□□□□ 0.12
RN7SL560P-201ENST00000577943 PCDHGA5Q9Y5G8 931 aa15.79■□□□□ 0.12
RN7SL560P-201ENST00000577943 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.78■□□□□ 0.12
RN7SL560P-201ENST00000577943 CD58P19256 250 aa15.78■□□□□ 0.12
RN7SL560P-201ENST00000577943 TIE1P35590 1138 aa15.78■□□□□ 0.12
RN7SL560P-201ENST00000577943 MPLP40238 635 aa15.78■□□□□ 0.12
RN7SL560P-201ENST00000577943 ENPEPQ07075 957 aa15.78■□□□□ 0.12
RN7SL560P-201ENST00000577943 INCA1Q0VD86 236 aa15.78■□□□□ 0.12
RN7SL560P-201ENST00000577943 CRY1Q16526 586 aa15.78■□□□□ 0.12
RN7SL560P-201ENST00000577943 USP39Q53GS9 565 aaKnown RBP15.78■□□□□ 0.12
RN7SL560P-201ENST00000577943 ANO7Q6IWH7 933 aa15.78■□□□□ 0.12
RN7SL560P-201ENST00000577943 CLEC20AQ6ZU45 233 aa15.78■□□□□ 0.12
RN7SL560P-201ENST00000577943 TTC30AQ86WT1 665 aa15.78■□□□□ 0.12
RN7SL560P-201ENST00000577943 SFTPA1Q8IWL2 248 aa15.78■□□□□ 0.12
RN7SL560P-201ENST00000577943 BBS7Q8IWZ6 715 aa15.78■□□□□ 0.12
RN7SL560P-201ENST00000577943 TWNKQ96RR1 684 aa15.78■□□□□ 0.12
RN7SL560P-201ENST00000577943 NIF3L1Q9GZT8 377 aa15.78■□□□□ 0.12
RN7SL560P-201ENST00000577943 DUSP15Q9H1R2 295 aaPredicted RBP15.78■□□□□ 0.12
RN7SL560P-201ENST00000577943 TMEM8AQ9HCN3 771 aa15.78■□□□□ 0.12
RN7SL560P-201ENST00000577943 INVSQ9Y283 1065 aa15.78■□□□□ 0.12
RN7SL560P-201ENST00000577943 GTF3C3Q9Y5Q9 886 aa15.78■□□□□ 0.12
RN7SL560P-201ENST00000577943 PLXND1Q9Y4D7 1925 aa15.78■□□□□ 0.12
RN7SL560P-201ENST00000577943 LAMA1P25391 3075 aa15.78■□□□□ 0.12
RN7SL560P-201ENST00000577943 KLF8O95600 359 aaPredicted RBP15.77■□□□□ 0.12
RN7SL560P-201ENST00000577943 ACO1P21399 889 aaKnown RBP15.77■□□□□ 0.12
RN7SL560P-201ENST00000577943 ATP5C1P36542 298 aaKnown RBP15.77■□□□□ 0.12
RN7SL560P-201ENST00000577943 GRIA2P42262 883 aa15.77■□□□□ 0.12
RN7SL560P-201ENST00000577943 PGFP49763 221 aa15.77■□□□□ 0.12
RN7SL560P-201ENST00000577943 MESP2Q0VG99 397 aa15.77■□□□□ 0.12
RN7SL560P-201ENST00000577943 ANO4Q32M45 955 aa15.77■□□□□ 0.12
RN7SL560P-201ENST00000577943 HSF5Q4G112 596 aaPredicted RBP15.77■□□□□ 0.12
RN7SL560P-201ENST00000577943 PREPLQ4J6C6 727 aaPredicted RBP15.77■□□□□ 0.12
RN7SL560P-201ENST00000577943 KRT39Q6A163 491 aa15.77■□□□□ 0.12
RN7SL560P-201ENST00000577943 IL31Q6EBC2 164 aa15.77■□□□□ 0.12
RN7SL560P-201ENST00000577943 GPRIN1Q7Z2K8 1008 aa15.77■□□□□ 0.12
RN7SL560P-201ENST00000577943 SMYD4Q8IYR2 804 aaPredicted RBP15.77■□□□□ 0.12
RN7SL560P-201ENST00000577943 ALLCQ8N6M5 410 aa15.77■□□□□ 0.12
RN7SL560P-201ENST00000577943 NAT16Q8N8M0 369 aa15.77■□□□□ 0.12
RN7SL560P-201ENST00000577943 TXNDC5Q8NBS9 432 aaKnown RBP15.77■□□□□ 0.12
RN7SL560P-201ENST00000577943 SMOC1Q9H4F8 434 aa15.77■□□□□ 0.12
RN7SL560P-201ENST00000577943 SPHK2Q9NRA0 654 aa15.77■□□□□ 0.12
RN7SL560P-201ENST00000577943 SCML2Q9UQR0 700 aa15.77■□□□□ 0.12
RN7SL560P-201ENST00000577943 NCOR2Q9Y618 2525 aa15.77■□□□□ 0.12
RN7SL560P-201ENST00000577943 TBC1D3BA6NDS4 549 aa15.76■□□□□ 0.11
RN7SL560P-201ENST00000577943 HHLA1C9JL84 531 aa15.76■□□□□ 0.11
RN7SL560P-201ENST00000577943 CYP26A1O43174 497 aa15.76■□□□□ 0.11
RN7SL560P-201ENST00000577943 CILPO75339 1184 aa15.76■□□□□ 0.11
RN7SL560P-201ENST00000577943 ALDH1A2O94788 518 aa15.76■□□□□ 0.11
RN7SL560P-201ENST00000577943 TBX18O95935 607 aa15.76■□□□□ 0.11
RN7SL560P-201ENST00000577943 EPB41P11171 864 aaKnown RBP15.76■□□□□ 0.11
RN7SL560P-201ENST00000577943 GTF2H1P32780 548 aa15.76■□□□□ 0.11
RN7SL560P-201ENST00000577943 TNFRSF4P43489 277 aa15.76■□□□□ 0.11
RN7SL560P-201ENST00000577943 CREB5Q02930 508 aa15.76■□□□□ 0.11
RN7SL560P-201ENST00000577943 GOLGA8FQ08AF8 430 aa15.76■□□□□ 0.11
RN7SL560P-201ENST00000577943 GOLGA8DPQ0D2H9 430 aa15.76■□□□□ 0.11
RN7SL560P-201ENST00000577943 EDRF1Q3B7T1 1238 aa15.76■□□□□ 0.11
RN7SL560P-201ENST00000577943 ZCWPW2Q504Y3 356 aa15.76■□□□□ 0.11
RN7SL560P-201ENST00000577943 ZNF394Q53GI3 561 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms