RNA–Protein interactions for RNA: ENST00000577578.5

CSNK1D-206, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 928 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-206ENST00000577578 CFAP97Q9P2B7 532 aa13.15□□□□□ -0.3
CSNK1D-206ENST00000577578 USP3Q9Y6I4 520 aa13.15□□□□□ -0.3
CSNK1D-206ENST00000577578 MYO18AQ92614 2054 aaKnown RBP13.15□□□□□ -0.3
CSNK1D-206ENST00000577578 CCDC163A0A0D9SF12 145 aa13.14□□□□□ -0.31
CSNK1D-206ENST00000577578 TLR5O60602 858 aa13.14□□□□□ -0.31
CSNK1D-206ENST00000577578 ATG13O75143 517 aa13.14□□□□□ -0.31
CSNK1D-206ENST00000577578 RNF40O75150 1001 aa13.14□□□□□ -0.31
CSNK1D-206ENST00000577578 CNR2P34972 360 aa13.14□□□□□ -0.31
CSNK1D-206ENST00000577578 EIF2DP41214 584 aaKnown RBP13.14□□□□□ -0.31
CSNK1D-206ENST00000577578 FMO5P49326 533 aa13.14□□□□□ -0.31
CSNK1D-206ENST00000577578 KIF11P52732 1056 aa13.14□□□□□ -0.31
CSNK1D-206ENST00000577578 MARSP56192 900 aaKnown RBP13.14□□□□□ -0.31
CSNK1D-206ENST00000577578 UBE2HP62256 183 aa13.14□□□□□ -0.31
CSNK1D-206ENST00000577578 CUL2Q13617 745 aa13.14□□□□□ -0.31
CSNK1D-206ENST00000577578 DHCR24Q15392 516 aa13.14□□□□□ -0.31
CSNK1D-206ENST00000577578 ISM2Q6H9L7 571 aa13.14□□□□□ -0.31
CSNK1D-206ENST00000577578 CCDC186Q7Z3E2 898 aa13.14□□□□□ -0.31
CSNK1D-206ENST00000577578 LONP2Q86WA8 852 aa13.14□□□□□ -0.31
CSNK1D-206ENST00000577578 UBR7Q8N806 425 aa13.14□□□□□ -0.31
CSNK1D-206ENST00000577578 TRIML1Q8N9V2 468 aa13.14□□□□□ -0.31
CSNK1D-206ENST00000577578 TTC16Q8NEE8 873 aa13.14□□□□□ -0.31
CSNK1D-206ENST00000577578 OTUB2Q96DC9 234 aa13.14□□□□□ -0.31
CSNK1D-206ENST00000577578 TMEM176AQ96HP8 235 aa13.14□□□□□ -0.31
CSNK1D-206ENST00000577578 UBXN6Q9BZV1 441 aa13.14□□□□□ -0.31
CSNK1D-206ENST00000577578 TLR8Q9NR97 1041 aaKnown RBP13.14□□□□□ -0.31
CSNK1D-206ENST00000577578 OSER1Q9NX31 292 aa13.14□□□□□ -0.31
CSNK1D-206ENST00000577578 TBC1D14Q9P2M4 693 aa13.14□□□□□ -0.31
CSNK1D-206ENST00000577578 SMG5Q9UPR3 1016 aaKnown RBP13.14□□□□□ -0.31
CSNK1D-206ENST00000577578 BICDL2A1A5D9 508 aa13.13□□□□□ -0.31
CSNK1D-206ENST00000577578 CYP26A1O43174 497 aa13.13□□□□□ -0.31
CSNK1D-206ENST00000577578 GREM1O60565 184 aa13.13□□□□□ -0.31
CSNK1D-206ENST00000577578 ACO1P21399 889 aaKnown RBP13.13□□□□□ -0.31
CSNK1D-206ENST00000577578 PSEN1P49768 467 aa13.13□□□□□ -0.31
CSNK1D-206ENST00000577578 DMWDQ09019 674 aa13.13□□□□□ -0.31
CSNK1D-206ENST00000577578 ZNF394Q53GI3 561 aa13.13□□□□□ -0.31
CSNK1D-206ENST00000577578 RAB41Q5JT25 222 aa13.13□□□□□ -0.31
CSNK1D-206ENST00000577578 RHBDF2Q6PJF5 856 aa13.13□□□□□ -0.31
CSNK1D-206ENST00000577578 NELFBQ8WX92 580 aa13.13□□□□□ -0.31
CSNK1D-206ENST00000577578 HEXIM2Q96MH2 286 aaKnown RBP13.13□□□□□ -0.31
CSNK1D-206ENST00000577578 NMUR1Q9HB89 426 aa13.13□□□□□ -0.31
CSNK1D-206ENST00000577578 CHMP5Q9NZZ3 219 aa13.13□□□□□ -0.31
CSNK1D-206ENST00000577578 SDK1Q7Z5N4 2213 aa13.13□□□□□ -0.31
CSNK1D-206ENST00000577578 A0A0A0MRY4 1105 aa13.12□□□□□ -0.31
CSNK1D-206ENST00000577578 P4HA2O15460 535 aa13.12□□□□□ -0.31
CSNK1D-206ENST00000577578 HRO43593 1189 aa13.12□□□□□ -0.31
CSNK1D-206ENST00000577578 ADH1CP00326 375 aa13.12□□□□□ -0.31
CSNK1D-206ENST00000577578 CHRM1P11229 460 aaPredicted RBP13.12□□□□□ -0.31
CSNK1D-206ENST00000577578 TBXAS1P24557 533 aaPredicted RBP13.12□□□□□ -0.31
CSNK1D-206ENST00000577578 FNTBP49356 437 aa13.12□□□□□ -0.31
CSNK1D-206ENST00000577578 KLHL10Q6JEL2 608 aa13.12□□□□□ -0.31
CSNK1D-206ENST00000577578 HTR3DQ70Z44 454 aa13.12□□□□□ -0.31
CSNK1D-206ENST00000577578 SYT13Q7L8C5 426 aa13.12□□□□□ -0.31
CSNK1D-206ENST00000577578 SCD5Q86SK9 330 aa13.12□□□□□ -0.31
CSNK1D-206ENST00000577578 WDR5BQ86VZ2 330 aa13.12□□□□□ -0.31
CSNK1D-206ENST00000577578 TRIM59Q8IWR1 403 aa13.12□□□□□ -0.31
CSNK1D-206ENST00000577578 CAMKK1Q8N5S9 505 aa13.12□□□□□ -0.31
CSNK1D-206ENST00000577578 ANKRD52Q8NB46 1076 aa13.12□□□□□ -0.31
CSNK1D-206ENST00000577578 CCDC26Q8TAB7 109 aa13.12□□□□□ -0.31
CSNK1D-206ENST00000577578 LMO3Q8TAP4 145 aa13.12□□□□□ -0.31
CSNK1D-206ENST00000577578 KLF16Q9BXK1 252 aaPredicted RBP13.12□□□□□ -0.31
CSNK1D-206ENST00000577578 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.12□□□□□ -0.31
CSNK1D-206ENST00000577578 CLIC5Q9NZA1 410 aa13.12□□□□□ -0.31
CSNK1D-206ENST00000577578 RALGAPA1Q6GYQ0 2036 aa13.12□□□□□ -0.31
CSNK1D-206ENST00000577578 K7EQS6 105 aa13.11□□□□□ -0.31
CSNK1D-206ENST00000577578 BIN1O00499 593 aa13.11□□□□□ -0.31
CSNK1D-206ENST00000577578 SCAMP3O14828 347 aaKnown RBP13.11□□□□□ -0.31
CSNK1D-206ENST00000577578 HOXC11O43248 304 aaPredicted RBP13.11□□□□□ -0.31
CSNK1D-206ENST00000577578 GNA14O95837 355 aa13.11□□□□□ -0.31
CSNK1D-206ENST00000577578 TBX18O95935 607 aa13.11□□□□□ -0.31
CSNK1D-206ENST00000577578 HOXC13P31276 330 aa13.11□□□□□ -0.31
CSNK1D-206ENST00000577578 ATP5C1P36542 298 aaKnown RBP13.11□□□□□ -0.31
CSNK1D-206ENST00000577578 YWHAEP62258 255 aaKnown RBP13.11□□□□□ -0.31
CSNK1D-206ENST00000577578 PAK1Q13153 545 aa13.11□□□□□ -0.31
CSNK1D-206ENST00000577578 PIGZQ86VD9 579 aa13.11□□□□□ -0.31
CSNK1D-206ENST00000577578 TTC30AQ86WT1 665 aa13.11□□□□□ -0.31
CSNK1D-206ENST00000577578 BBS7Q8IWZ6 715 aa13.11□□□□□ -0.31
CSNK1D-206ENST00000577578 ETFBKMTQ8IXQ9 262 aa13.11□□□□□ -0.31
CSNK1D-206ENST00000577578 DCLK2Q8N568 766 aa13.11□□□□□ -0.31
CSNK1D-206ENST00000577578 WBP2Q969T9 261 aa13.11□□□□□ -0.31
CSNK1D-206ENST00000577578 JAKMIP2Q96AA8 810 aa13.11□□□□□ -0.31
CSNK1D-206ENST00000577578 NACA2Q9H009 215 aa13.11□□□□□ -0.31
CSNK1D-206ENST00000577578 KIAA1468Q9P260 1216 aa13.11□□□□□ -0.31
CSNK1D-206ENST00000577578 KIAA1257Q9ULG3 409 aa13.11□□□□□ -0.31
CSNK1D-206ENST00000577578 CTNND2Q9UQB3 1225 aa13.11□□□□□ -0.31
CSNK1D-206ENST00000577578 SH3BP1Q9Y3L3 701 aa13.11□□□□□ -0.31
CSNK1D-206ENST00000577578 A0A1W2PQH9 124 aa13.1□□□□□ -0.31
CSNK1D-206ENST00000577578 ADH5P11766 374 aa13.1□□□□□ -0.31
CSNK1D-206ENST00000577578 RARGP13631 454 aa13.1□□□□□ -0.31
CSNK1D-206ENST00000577578 TGM1P22735 817 aa13.1□□□□□ -0.31
CSNK1D-206ENST00000577578 MESP2Q0VG99 397 aa13.1□□□□□ -0.31
CSNK1D-206ENST00000577578 CCDC40Q4G0X9 1142 aa13.1□□□□□ -0.31
CSNK1D-206ENST00000577578 PKDCCQ504Y2 493 aa13.1□□□□□ -0.31
CSNK1D-206ENST00000577578 LY6G5CQ5SRR4 150 aa13.1□□□□□ -0.31
CSNK1D-206ENST00000577578 PM20D1Q6GTS8 502 aa13.1□□□□□ -0.31
CSNK1D-206ENST00000577578 LAIR1Q6GTX8 287 aa13.1□□□□□ -0.31
CSNK1D-206ENST00000577578 C12orf40Q86WS4 652 aa13.1□□□□□ -0.31
CSNK1D-206ENST00000577578 PHTF2Q8N3S3 785 aa13.1□□□□□ -0.31
CSNK1D-206ENST00000577578 GPR161Q8N6U8 529 aaKnown RBP13.1□□□□□ -0.31
CSNK1D-206ENST00000577578 RPLP0P6Q8NHW5 317 aa13.1□□□□□ -0.31
CSNK1D-206ENST00000577578 USP33Q8TEY7 942 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms