RNA–Protein interactions for RNA: ENST00000575112.5

RPAIN-215, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 3,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-215ENST00000575112 CDHR3Q6ZTQ4 885 aa8.87□□□□□ -0.99
RPAIN-215ENST00000575112 SLC9A9Q8IVB4 645 aa8.87□□□□□ -0.99
RPAIN-215ENST00000575112 IGDCC3Q8IVU1 814 aa8.87□□□□□ -0.99
RPAIN-215ENST00000575112 AGGF1Q8N302 714 aaeCLIP8.87□□□□□ -0.99
RPAIN-215ENST00000575112 OPTNQ96CV9 577 aa8.87□□□□□ -0.99
RPAIN-215ENST00000575112 NMUR2Q9GZQ4 415 aa8.87□□□□□ -0.99
RPAIN-215ENST00000575112 ARHGEF4Q9NR80 690 aa8.87□□□□□ -0.99
RPAIN-215ENST00000575112 PACSIN3Q9UKS6 424 aa8.87□□□□□ -0.99
RPAIN-215ENST00000575112 GPR25O00155 361 aa8.87□□□□□ -0.99
RPAIN-215ENST00000575112 CYB561D2O14569 222 aa8.87□□□□□ -0.99
RPAIN-215ENST00000575112 MOCS2O96007 188 aaPredicted RBP8.87□□□□□ -0.99
RPAIN-215ENST00000575112 TBXAS1P24557 533 aaPredicted RBP8.87□□□□□ -0.99
RPAIN-215ENST00000575112 TMPRSS15P98073 1019 aa8.87□□□□□ -0.99
RPAIN-215ENST00000575112 TTLL4Q14679 1199 aa8.87□□□□□ -0.99
RPAIN-215ENST00000575112 GOLGA7BQ2TAP0 167 aa8.87□□□□□ -0.99
RPAIN-215ENST00000575112 FYB2Q5VWT5 728 aa8.87□□□□□ -0.99
RPAIN-215ENST00000575112 APOBEC3FQ8IUX4 373 aaKnown RBP8.87□□□□□ -0.99
RPAIN-215ENST00000575112 LMNTD2Q8IXW0 634 aa8.87□□□□□ -0.99
RPAIN-215ENST00000575112 TMC2Q8TDI7 906 aa8.87□□□□□ -0.99
RPAIN-215ENST00000575112 CCDC124Q96CT7 223 aaKnown RBP8.87□□□□□ -0.99
RPAIN-215ENST00000575112 CGRRF1Q99675 332 aa8.87□□□□□ -0.99
RPAIN-215ENST00000575112 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.87□□□□□ -0.99
RPAIN-215ENST00000575112 PPARGC1AQ9UBK2 798 aaKnown RBP8.87□□□□□ -0.99
RPAIN-215ENST00000575112 TSR3Q9UJK0 312 aaKnown RBP8.87□□□□□ -0.99
RPAIN-215ENST00000575112 C19orf81C9J6K1 198 aa8.87□□□□□ -0.99
RPAIN-215ENST00000575112 P4HA2O15460 535 aa8.87□□□□□ -0.99
RPAIN-215ENST00000575112 RTN3O95197 1032 aaPredicted RBP8.87□□□□□ -0.99
RPAIN-215ENST00000575112 LUC7L3O95232 432 aaKnown RBP8.87□□□□□ -0.99
RPAIN-215ENST00000575112 C4BPAP04003 597 aaKnown RBP8.87□□□□□ -0.99
RPAIN-215ENST00000575112 SRGAP2BP0DMP2 458 aa8.87□□□□□ -0.99
RPAIN-215ENST00000575112 RFX1P22670 979 aa8.87□□□□□ -0.99
RPAIN-215ENST00000575112 CA8P35219 290 aa8.87□□□□□ -0.99
RPAIN-215ENST00000575112 SKIV2L2P42285 1042 aaKnown RBP8.87□□□□□ -0.99
RPAIN-215ENST00000575112 RANBP1P43487 201 aa8.87□□□□□ -0.99
RPAIN-215ENST00000575112 ARL4CP56559 192 aa8.87□□□□□ -0.99
RPAIN-215ENST00000575112 BEX3Q00994 111 aa8.87□□□□□ -0.99
RPAIN-215ENST00000575112 PSMD6Q15008 389 aa8.87□□□□□ -0.99
RPAIN-215ENST00000575112 GALNT15Q8N3T1 639 aa8.87□□□□□ -0.99
RPAIN-215ENST00000575112 C18orf25Q96B23 403 aaPredicted RBP8.87□□□□□ -0.99
RPAIN-215ENST00000575112 STRA6Q9BX79 667 aa8.87□□□□□ -0.99
RPAIN-215ENST00000575112 VPS11Q9H270 941 aa8.87□□□□□ -0.99
RPAIN-215ENST00000575112 CYP4F11Q9HBI6 524 aa8.87□□□□□ -0.99
RPAIN-215ENST00000575112 PPM1HQ9ULR3 514 aa8.87□□□□□ -0.99
RPAIN-215ENST00000575112 MYPNQ86TC9 1320 aa8.87□□□□□ -0.99
RPAIN-215ENST00000575112 LOC100653049A0A140TA62 436 aa8.86□□□□□ -0.99
RPAIN-215ENST00000575112 MYOCOSA0A1B0GUC4 107 aa8.86□□□□□ -0.99
RPAIN-215ENST00000575112 H3BRJ5 948 aa8.86□□□□□ -0.99
RPAIN-215ENST00000575112 KCNK1O00180 336 aa8.86□□□□□ -0.99
RPAIN-215ENST00000575112 GYG2O15488 501 aa8.86□□□□□ -0.99
RPAIN-215ENST00000575112 KRT34O76011 436 aa8.86□□□□□ -0.99
RPAIN-215ENST00000575112 ENO1P06733 434 aaKnown RBP8.86□□□□□ -0.99
RPAIN-215ENST00000575112 CCDC130P13994 396 aa8.86□□□□□ -0.99
RPAIN-215ENST00000575112 ACADSP16219 412 aa8.86□□□□□ -0.99
RPAIN-215ENST00000575112 SDC4P31431 198 aa8.86□□□□□ -0.99
RPAIN-215ENST00000575112 ELK3P41970 407 aa8.86□□□□□ -0.99
RPAIN-215ENST00000575112 SCNN1BP51168 640 aa8.86□□□□□ -0.99
RPAIN-215ENST00000575112 CCDC15Q0P6D6 951 aa8.86□□□□□ -0.99
RPAIN-215ENST00000575112 LAMB3Q13751 1172 aa8.86□□□□□ -0.99
RPAIN-215ENST00000575112 TMEM132DQ14C87 1099 aa8.86□□□□□ -0.99
RPAIN-215ENST00000575112 DCAF6Q58WW2 860 aa8.86□□□□□ -0.99
RPAIN-215ENST00000575112 RWDD4Q6NW29 188 aaKnown RBP8.86□□□□□ -0.99
RPAIN-215ENST00000575112 PAOXQ6QHF9 649 aa8.86□□□□□ -0.99
RPAIN-215ENST00000575112 PTCD3Q96EY7 689 aaKnown RBP8.86□□□□□ -0.99
RPAIN-215ENST00000575112 PIWIL1Q96J94 861 aaKnown RBP8.86□□□□□ -0.99
RPAIN-215ENST00000575112 DNAJC1Q96KC8 554 aaKnown RBP8.86□□□□□ -0.99
RPAIN-215ENST00000575112 MFSD14AQ96MC6 490 aa8.86□□□□□ -0.99
RPAIN-215ENST00000575112 FAM161BQ96MY7 647 aa8.86□□□□□ -0.99
RPAIN-215ENST00000575112 ACAP3Q96P50 834 aa8.86□□□□□ -0.99
RPAIN-215ENST00000575112 C20orf27Q9GZN8 174 aa8.86□□□□□ -0.99
RPAIN-215ENST00000575112 SNX25Q9H3E2 840 aa8.86□□□□□ -0.99
RPAIN-215ENST00000575112 TMPRSS4Q9NRS4 437 aa8.86□□□□□ -0.99
RPAIN-215ENST00000575112 SLC17A6Q9P2U8 582 aa8.86□□□□□ -0.99
RPAIN-215ENST00000575112 CPA4Q9UI42 421 aa8.86□□□□□ -0.99
RPAIN-215ENST00000575112 MYO18AQ92614 2054 aaKnown RBP8.86□□□□□ -0.99
RPAIN-215ENST00000575112 DCAF8L1A6NGE4 600 aa8.86□□□□□ -0.99
RPAIN-215ENST00000575112 SPATA31C2B4DYI2 1134 aa8.86□□□□□ -0.99
RPAIN-215ENST00000575112 LPXNO60711 386 aa8.86□□□□□ -0.99
RPAIN-215ENST00000575112 RNASEH1O60930 286 aaKnown RBP8.86□□□□□ -0.99
RPAIN-215ENST00000575112 WFS1O76024 890 aa8.86□□□□□ -0.99
RPAIN-215ENST00000575112 PSMG1O95456 288 aa8.86□□□□□ -0.99
RPAIN-215ENST00000575112 MRPS35P82673 323 aaKnown RBP8.86□□□□□ -0.99
RPAIN-215ENST00000575112 ITKQ08881 620 aa8.86□□□□□ -0.99
RPAIN-215ENST00000575112 CLUL1Q15846 466 aa8.86□□□□□ -0.99
RPAIN-215ENST00000575112 NFIL3Q16649 462 aa8.86□□□□□ -0.99
RPAIN-215ENST00000575112 C16orf46Q6P387 395 aa8.86□□□□□ -0.99
RPAIN-215ENST00000575112 RNF111Q6ZNA4 994 aa8.86□□□□□ -0.99
RPAIN-215ENST00000575112 RCOR2Q8IZ40 523 aa8.86□□□□□ -0.99
RPAIN-215ENST00000575112 SH3TC2Q8TF17 1288 aa8.86□□□□□ -0.99
RPAIN-215ENST00000575112 SERAC1Q96JX3 654 aa8.86□□□□□ -0.99
RPAIN-215ENST00000575112 TMEM120AQ9BXJ8 343 aa8.86□□□□□ -0.99
RPAIN-215ENST00000575112 DCLRE1BQ9H816 532 aa8.86□□□□□ -0.99
RPAIN-215ENST00000575112 TSPAN16Q9UKR8 245 aa8.86□□□□□ -0.99
RPAIN-215ENST00000575112 MYO7AQ13402 2215 aa8.86□□□□□ -0.99
RPAIN-215ENST00000575112 BTAF1O14981 1849 aa8.86□□□□□ -0.99
RPAIN-215ENST00000575112 RBBP6Q7Z6E9 1792 aaKnown RBP8.86□□□□□ -0.99
RPAIN-215ENST00000575112 PPEF2O14830 753 aa8.86□□□□□ -0.99
RPAIN-215ENST00000575112 LIN7AO14910 233 aaPredicted RBP8.86□□□□□ -0.99
RPAIN-215ENST00000575112 USP2O75604 605 aaPredicted RBP8.86□□□□□ -0.99
RPAIN-215ENST00000575112 FARP2O94887 1054 aaPredicted RBP8.86□□□□□ -0.99
RPAIN-215ENST00000575112 UNGP13051 313 aaPredicted RBP8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms