RNA–Protein interactions for RNA: ENST00000574218.1

CTNS-208, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 5

Gene CTNS, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-208ENST00000574218 PCED1BQ96HM7 432 aa12.7□□□□□ -0.38
CTNS-208ENST00000574218 C8orf48Q96LL4 319 aa12.7□□□□□ -0.38
CTNS-208ENST00000574218 XPO6Q96QU8 1125 aaKnown RBP12.7□□□□□ -0.38
CTNS-208ENST00000574218 ELOVL4Q9GZR5 314 aa12.7□□□□□ -0.38
CTNS-208ENST00000574218 IKZF4Q9H2S9 585 aa12.7□□□□□ -0.38
CTNS-208ENST00000574218 SCUBE2Q9NQ36 999 aa12.7□□□□□ -0.38
CTNS-208ENST00000574218 RAXQ9Y2V3 346 aa12.7□□□□□ -0.38
CTNS-208ENST00000574218 PCDHB13Q9Y5F0 798 aa12.7□□□□□ -0.38
CTNS-208ENST00000574218 ATP8B3O60423 1300 aa12.69□□□□□ -0.38
CTNS-208ENST00000574218 HOXC11O43248 304 aaPredicted RBP12.69□□□□□ -0.38
CTNS-208ENST00000574218 PRPF6O94906 941 aaKnown RBP12.69□□□□□ -0.38
CTNS-208ENST00000574218 CER1O95813 267 aa12.69□□□□□ -0.38
CTNS-208ENST00000574218 NDUFV2P19404 249 aa12.69□□□□□ -0.38
CTNS-208ENST00000574218 WARSP23381 471 aaKnown RBP12.69□□□□□ -0.38
CTNS-208ENST00000574218 LMO2P25791 158 aa12.69□□□□□ -0.38
CTNS-208ENST00000574218 YWHAQP27348 245 aa12.69□□□□□ -0.38
CTNS-208ENST00000574218 WNT7BP56706 349 aa12.69□□□□□ -0.38
CTNS-208ENST00000574218 GRIK2Q13002 908 aa12.69□□□□□ -0.38
CTNS-208ENST00000574218 SURF1Q15526 300 aa12.69□□□□□ -0.38
CTNS-208ENST00000574218 HECTD3Q5T447 861 aa12.69□□□□□ -0.38
CTNS-208ENST00000574218 NUP93Q8N1F7 819 aa12.69□□□□□ -0.38
CTNS-208ENST00000574218 GLIS3Q8NEA6 775 aa12.69□□□□□ -0.38
CTNS-208ENST00000574218 PDE11AQ9HCR9 933 aa12.69□□□□□ -0.38
CTNS-208ENST00000574218 CRTAC1Q9NQ79 661 aa12.69□□□□□ -0.38
CTNS-208ENST00000574218 SPHK2Q9NRA0 654 aa12.69□□□□□ -0.38
CTNS-208ENST00000574218 DNAJC17Q9NVM6 304 aaKnown RBP12.69□□□□□ -0.38
CTNS-208ENST00000574218 TBC1D7Q9P0N9 293 aa12.69□□□□□ -0.38
CTNS-208ENST00000574218 CCDC39Q9UFE4 941 aa12.69□□□□□ -0.38
CTNS-208ENST00000574218 A0A1B0GTW7 788 aa12.68□□□□□ -0.38
CTNS-208ENST00000574218 CLSTN1O94985 981 aa12.68□□□□□ -0.38
CTNS-208ENST00000574218 IRF1P10914 325 aa12.68□□□□□ -0.38
CTNS-208ENST00000574218 CHRM1P11229 460 aaPredicted RBP12.68□□□□□ -0.38
CTNS-208ENST00000574218 GNL1P36915 607 aaPredicted RBP12.68□□□□□ -0.38
CTNS-208ENST00000574218 ALCAMQ13740 583 aa12.68□□□□□ -0.38
CTNS-208ENST00000574218 STARD3Q14849 445 aa12.68□□□□□ -0.38
CTNS-208ENST00000574218 DUOXA2Q1HG44 320 aa12.68□□□□□ -0.38
CTNS-208ENST00000574218 EGFLAMQ63HQ2 1017 aa12.68□□□□□ -0.38
CTNS-208ENST00000574218 IL27RAQ6UWB1 636 aa12.68□□□□□ -0.38
CTNS-208ENST00000574218 ETFBKMTQ8IXQ9 262 aa12.68□□□□□ -0.38
CTNS-208ENST00000574218 GPD1LQ8N335 351 aa12.68□□□□□ -0.38
CTNS-208ENST00000574218 PHTF2Q8N3S3 785 aa12.68□□□□□ -0.38
CTNS-208ENST00000574218 OR6B3Q8NGW1 331 aa12.68□□□□□ -0.38
CTNS-208ENST00000574218 KBTBD7Q8WVZ9 684 aa12.68□□□□□ -0.38
CTNS-208ENST00000574218 OVCA2Q8WZ82 227 aa12.68□□□□□ -0.38
CTNS-208ENST00000574218 ERLEC1Q96DZ1 483 aa12.68□□□□□ -0.38
CTNS-208ENST00000574218 ZNF419Q96HQ0 510 aaPredicted RBP12.68□□□□□ -0.38
CTNS-208ENST00000574218 KIF2CQ99661 725 aa12.68□□□□□ -0.38
CTNS-208ENST00000574218 CDC6Q99741 560 aa12.68□□□□□ -0.38
CTNS-208ENST00000574218 MIR1-1HGQ9H1L0 117 aa12.68□□□□□ -0.38
CTNS-208ENST00000574218 PCIF1Q9H4Z3 704 aa12.68□□□□□ -0.38
CTNS-208ENST00000574218 INTS13Q9NVM9 706 aa12.68□□□□□ -0.38
CTNS-208ENST00000574218 SIX4Q9UIU6 781 aa12.68□□□□□ -0.38
CTNS-208ENST00000574218 STARD13Q9Y3M8 1113 aa12.68□□□□□ -0.38
CTNS-208ENST00000574218 TMEM131Q92545 1883 aa12.68□□□□□ -0.38
CTNS-208ENST00000574218 TP53BP1Q12888 1972 aaPredicted RBP12.67□□□□□ -0.38
CTNS-208ENST00000574218 A0A1W2PQF6 199 aa12.67□□□□□ -0.38
CTNS-208ENST00000574218 KIAA0391O15091 583 aaKnown RBP12.67□□□□□ -0.38
CTNS-208ENST00000574218 GJB3O75712 270 aa12.67□□□□□ -0.38
CTNS-208ENST00000574218 PPP1R37O75864 691 aa12.67□□□□□ -0.38
CTNS-208ENST00000574218 MAOBP27338 520 aa12.67□□□□□ -0.38
CTNS-208ENST00000574218 TXLNAP40222 546 aa12.67□□□□□ -0.38
CTNS-208ENST00000574218 MATKP42679 507 aa12.67□□□□□ -0.38
CTNS-208ENST00000574218 TNNC1P63316 161 aa12.67□□□□□ -0.38
CTNS-208ENST00000574218 GOLGA8FQ08AF8 430 aa12.67□□□□□ -0.38
CTNS-208ENST00000574218 GOLGA8DPQ0D2H9 430 aa12.67□□□□□ -0.38
CTNS-208ENST00000574218 C19orf57Q0VDD7 668 aa12.67□□□□□ -0.38
CTNS-208ENST00000574218 GLRX5Q86SX6 157 aa12.67□□□□□ -0.38
CTNS-208ENST00000574218 BBS7Q8IWZ6 715 aa12.67□□□□□ -0.38
CTNS-208ENST00000574218 GALNT15Q8N3T1 639 aa12.67□□□□□ -0.38
CTNS-208ENST00000574218 ZCCHC9Q8N567 271 aaKnown RBP12.67□□□□□ -0.38
CTNS-208ENST00000574218 ZSWIM2Q8NEG5 633 aa12.67□□□□□ -0.38
CTNS-208ENST00000574218 ENGASEQ8NFI3 743 aa12.67□□□□□ -0.38
CTNS-208ENST00000574218 FAM84AQ96KN4 292 aa12.67□□□□□ -0.38
CTNS-208ENST00000574218 KIAA1522Q9P206 1035 aaPredicted RBP12.67□□□□□ -0.38
CTNS-208ENST00000574218 STK17AQ9UEE5 414 aa12.67□□□□□ -0.38
CTNS-208ENST00000574218 LSM7Q9UK45 103 aaKnown RBP12.67□□□□□ -0.38
CTNS-208ENST00000574218 PCOLCE2Q9UKZ9 415 aa12.67□□□□□ -0.38
CTNS-208ENST00000574218 ZNF233A6NK53 670 aa12.66□□□□□ -0.38
CTNS-208ENST00000574218 GOLGA8CPA6NN73 597 aa12.66□□□□□ -0.38
CTNS-208ENST00000574218 NEDD8-MDP1E9PL57 170 aa12.66□□□□□ -0.38
CTNS-208ENST00000574218 COCHO43405 550 aa12.66□□□□□ -0.38
CTNS-208ENST00000574218 ZIC2O95409 532 aaPredicted RBP12.66□□□□□ -0.38
CTNS-208ENST00000574218 NCAM1P13591 858 aa12.66□□□□□ -0.38
CTNS-208ENST00000574218 IDEP14735 1019 aa12.66□□□□□ -0.38
CTNS-208ENST00000574218 PTPN1P18031 435 aaKnown RBP12.66□□□□□ -0.38
CTNS-208ENST00000574218 CD6P30203 668 aa12.66□□□□□ -0.38
CTNS-208ENST00000574218 KCNA1Q09470 495 aa12.66□□□□□ -0.38
CTNS-208ENST00000574218 SUZ12Q15022 739 aaKnown RBP12.66□□□□□ -0.38
CTNS-208ENST00000574218 STXBP4Q6ZWJ1 553 aa12.66□□□□□ -0.38
CTNS-208ENST00000574218 SV2BQ7L1I2 683 aa12.66□□□□□ -0.38
CTNS-208ENST00000574218 TMPRSS7Q7RTY8 843 aa12.66□□□□□ -0.38
CTNS-208ENST00000574218 TMEM25Q86YD3 366 aa12.66□□□□□ -0.38
CTNS-208ENST00000574218 CXorf38Q8TB03 319 aa12.66□□□□□ -0.38
CTNS-208ENST00000574218 RHBDD1Q8TEB9 315 aa12.66□□□□□ -0.38
CTNS-208ENST00000574218 CBWD1Q9BRT8 395 aa12.66□□□□□ -0.38
CTNS-208ENST00000574218 MED10Q9BTT4 135 aa12.66□□□□□ -0.38
CTNS-208ENST00000574218 BBS2Q9BXC9 721 aa12.66□□□□□ -0.38
CTNS-208ENST00000574218 GAREM1Q9H706 876 aa12.66□□□□□ -0.38
CTNS-208ENST00000574218 PRDM16Q9HAZ2 1276 aa12.66□□□□□ -0.38
CTNS-208ENST00000574218 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.66□□□□□ -0.383e-13■■■■■ 511.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms