RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 MCCD1P59942 119 aaPredicted RBP13.4□□□□□ -0.26
NPLOC4-213ENST00000573519 CUL2Q13617 745 aa13.4□□□□□ -0.26
NPLOC4-213ENST00000573519 MORC3Q14149 939 aa13.4□□□□□ -0.26
NPLOC4-213ENST00000573519 CEP68Q76N32 757 aa13.4□□□□□ -0.26
NPLOC4-213ENST00000573519 SLC4A11Q8NBS3 891 aa13.4□□□□□ -0.26
NPLOC4-213ENST00000573519 SLC35C1Q96A29 364 aa13.4□□□□□ -0.26
NPLOC4-213ENST00000573519 ZFRQ96KR1 1074 aaKnown RBP13.4□□□□□ -0.26
NPLOC4-213ENST00000573519 CEP63Q96MT8 703 aa13.4□□□□□ -0.26
NPLOC4-213ENST00000573519 DUSP16Q9BY84 665 aa13.4□□□□□ -0.26
NPLOC4-213ENST00000573519 SCML2Q9UQR0 700 aa13.4□□□□□ -0.26
NPLOC4-213ENST00000573519 A0A1W2PQH9 124 aa13.39□□□□□ -0.27
NPLOC4-213ENST00000573519 BICDL2A1A5D9 508 aa13.39□□□□□ -0.27
NPLOC4-213ENST00000573519 HRO43593 1189 aa13.39□□□□□ -0.27
NPLOC4-213ENST00000573519 TBX18O95935 607 aa13.39□□□□□ -0.27
NPLOC4-213ENST00000573519 ADH5P11766 374 aa13.39□□□□□ -0.27
NPLOC4-213ENST00000573519 RARGP13631 454 aa13.39□□□□□ -0.27
NPLOC4-213ENST00000573519 CNR2P34972 360 aa13.39□□□□□ -0.27
NPLOC4-213ENST00000573519 ATP5C1P36542 298 aaKnown RBP13.39□□□□□ -0.27
NPLOC4-213ENST00000573519 SLC6A11P48066 632 aa13.39□□□□□ -0.27
NPLOC4-213ENST00000573519 RAD23BP54727 409 aa13.39□□□□□ -0.27
NPLOC4-213ENST00000573519 STX17P56962 302 aa13.39□□□□□ -0.27
NPLOC4-213ENST00000573519 SLC8A3P57103 927 aa13.39□□□□□ -0.27
NPLOC4-213ENST00000573519 YWHAEP62258 255 aaKnown RBP13.39□□□□□ -0.27
NPLOC4-213ENST00000573519 KDSRQ06136 332 aa13.39□□□□□ -0.27
NPLOC4-213ENST00000573519 GOLGA8FQ08AF8 430 aa13.39□□□□□ -0.27
NPLOC4-213ENST00000573519 GOLGA8DPQ0D2H9 430 aa13.39□□□□□ -0.27
NPLOC4-213ENST00000573519 C2orf27AQ580R0 203 aa13.39□□□□□ -0.27
NPLOC4-213ENST00000573519 RHBDF2Q6PJF5 856 aa13.39□□□□□ -0.27
NPLOC4-213ENST00000573519 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.39□□□□□ -0.27
NPLOC4-213ENST00000573519 WDR5BQ86VZ2 330 aa13.39□□□□□ -0.27
NPLOC4-213ENST00000573519 BBS7Q8IWZ6 715 aa13.39□□□□□ -0.27
NPLOC4-213ENST00000573519 KIAA1958Q8N8K9 716 aa13.39□□□□□ -0.27
NPLOC4-213ENST00000573519 EZH1Q92800 747 aaPredicted RBP13.39□□□□□ -0.27
NPLOC4-213ENST00000573519 ACDQ96AP0 544 aa13.39□□□□□ -0.27
NPLOC4-213ENST00000573519 FAXDC2Q96IV6 333 aa13.39□□□□□ -0.27
NPLOC4-213ENST00000573519 HHIPQ96QV1 700 aa13.39□□□□□ -0.27
NPLOC4-213ENST00000573519 DUSP9Q99956 384 aaKnown RBP13.39□□□□□ -0.27
NPLOC4-213ENST00000573519 PNPLA8Q9NP80 782 aa13.39□□□□□ -0.27
NPLOC4-213ENST00000573519 OSER1Q9NX31 292 aa13.39□□□□□ -0.27
NPLOC4-213ENST00000573519 NAGPAQ9UK23 515 aa13.39□□□□□ -0.27
NPLOC4-213ENST00000573519 NUDT5Q9UKK9 219 aa13.39□□□□□ -0.27
NPLOC4-213ENST00000573519 FANCMQ8IYD8 2048 aa13.39□□□□□ -0.27
NPLOC4-213ENST00000573519 MDM4O15151 490 aa13.38□□□□□ -0.27
NPLOC4-213ENST00000573519 CD19P15391 556 aa13.38□□□□□ -0.27
NPLOC4-213ENST00000573519 ID4P47928 161 aa13.38□□□□□ -0.27
NPLOC4-213ENST00000573519 FMO5P49326 533 aa13.38□□□□□ -0.27
NPLOC4-213ENST00000573519 KIF11P52732 1056 aa13.38□□□□□ -0.27
NPLOC4-213ENST00000573519 GAD2Q05329 585 aa13.38□□□□□ -0.27
NPLOC4-213ENST00000573519 GOLGA7BQ2TAP0 167 aa13.38□□□□□ -0.27
NPLOC4-213ENST00000573519 GAB4Q2WGN9 574 aa13.38□□□□□ -0.27
NPLOC4-213ENST00000573519 ANO4Q32M45 955 aa13.38□□□□□ -0.27
NPLOC4-213ENST00000573519 C10orf120Q5SQS8 335 aa13.38□□□□□ -0.27
NPLOC4-213ENST00000573519 LY6G5CQ5SRR4 150 aa13.38□□□□□ -0.27
NPLOC4-213ENST00000573519 BTBD8Q5XKL5 378 aa13.38□□□□□ -0.27
NPLOC4-213ENST00000573519 LAIR1Q6GTX8 287 aa13.38□□□□□ -0.27
NPLOC4-213ENST00000573519 TTI2Q6NXR4 508 aa13.38□□□□□ -0.27
NPLOC4-213ENST00000573519 NAT16Q8N8M0 369 aa13.38□□□□□ -0.27
NPLOC4-213ENST00000573519 CCDC26Q8TAB7 109 aa13.38□□□□□ -0.27
NPLOC4-213ENST00000573519 WBP2Q969T9 261 aa13.38□□□□□ -0.27
NPLOC4-213ENST00000573519 OTUB2Q96DC9 234 aa13.38□□□□□ -0.27
NPLOC4-213ENST00000573519 PNKPQ96T60 521 aa13.38□□□□□ -0.27
NPLOC4-213ENST00000573519 NMUR1Q9HB89 426 aa13.38□□□□□ -0.27
NPLOC4-213ENST00000573519 KIAA1468Q9P260 1216 aa13.38□□□□□ -0.27
NPLOC4-213ENST00000573519 LSM7Q9UK45 103 aaKnown RBP13.38□□□□□ -0.27
NPLOC4-213ENST00000573519 USP18Q9UMW8 372 aa13.38□□□□□ -0.27
NPLOC4-213ENST00000573519 COQ4Q9Y3A0 265 aa13.38□□□□□ -0.27
NPLOC4-213ENST00000573519 MYO16Q9Y6X6 1858 aa13.38□□□□□ -0.27
NPLOC4-213ENST00000573519 K7EQS6 105 aa13.37□□□□□ -0.27
NPLOC4-213ENST00000573519 APODP05090 189 aa13.37□□□□□ -0.27
NPLOC4-213ENST00000573519 CCDC192P0DO97 292 aa13.37□□□□□ -0.27
NPLOC4-213ENST00000573519 RALAP11233 206 aa13.37□□□□□ -0.27
NPLOC4-213ENST00000573519 TBXAS1P24557 533 aaPredicted RBP13.37□□□□□ -0.27
NPLOC4-213ENST00000573519 HOXA6P31267 233 aa13.37□□□□□ -0.27
NPLOC4-213ENST00000573519 SPEM2Q0P670 501 aa13.37□□□□□ -0.27
NPLOC4-213ENST00000573519 CETN1Q12798 172 aa13.37□□□□□ -0.27
NPLOC4-213ENST00000573519 PAK1Q13153 545 aa13.37□□□□□ -0.27
NPLOC4-213ENST00000573519 DMC1Q14565 340 aa13.37□□□□□ -0.27
NPLOC4-213ENST00000573519 SGO2Q562F6 1265 aa13.37□□□□□ -0.27
NPLOC4-213ENST00000573519 ARHGAP17Q68EM7 881 aa13.37□□□□□ -0.27
NPLOC4-213ENST00000573519 SYT13Q7L8C5 426 aa13.37□□□□□ -0.27
NPLOC4-213ENST00000573519 TADA2BQ86TJ2 420 aa13.37□□□□□ -0.27
NPLOC4-213ENST00000573519 PIGZQ86VD9 579 aa13.37□□□□□ -0.27
NPLOC4-213ENST00000573519 C12orf40Q86WS4 652 aa13.37□□□□□ -0.27
NPLOC4-213ENST00000573519 TTC30AQ86WT1 665 aa13.37□□□□□ -0.27
NPLOC4-213ENST00000573519 MIB1Q86YT6 1006 aa13.37□□□□□ -0.27
NPLOC4-213ENST00000573519 PPM1KQ8N3J5 372 aa13.37□□□□□ -0.27
NPLOC4-213ENST00000573519 CAMKK1Q8N5S9 505 aa13.37□□□□□ -0.27
NPLOC4-213ENST00000573519 NT5C1BQ96P26 610 aa13.37□□□□□ -0.27
NPLOC4-213ENST00000573519 KLF16Q9BXK1 252 aaPredicted RBP13.37□□□□□ -0.27
NPLOC4-213ENST00000573519 FAM124BQ9H5Z6 455 aaPredicted RBP13.37□□□□□ -0.27
NPLOC4-213ENST00000573519 CYLDQ9NQC7 956 aa13.37□□□□□ -0.27
NPLOC4-213ENST00000573519 ARHGEF4Q9NR80 690 aa13.37□□□□□ -0.27
NPLOC4-213ENST00000573519 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.37□□□□□ -0.27
NPLOC4-213ENST00000573519 HESX1Q9UBX0 185 aa13.37□□□□□ -0.27
NPLOC4-213ENST00000573519 TSPAN16Q9UKR8 245 aa13.37□□□□□ -0.27
NPLOC4-213ENST00000573519 F5P12259 2224 aa13.36□□□□□ -0.27
NPLOC4-213ENST00000573519 ANTXRLA6NF34 631 aa13.36□□□□□ -0.27
NPLOC4-213ENST00000573519 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.36□□□□□ -0.27
NPLOC4-213ENST00000573519 RPP40O75818 363 aaKnown RBP13.36□□□□□ -0.27
NPLOC4-213ENST00000573519 KAT7O95251 611 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms