RNA–Protein interactions for RNA: ENST00000571739.5

TRAPPC1-203, Transcript of trafficking protein particle complex 1, humanhuman

TSL 3

Gene TRAPPC1, Length 648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-203ENST00000571739 BRD9Q9H8M2 597 aa9.15□□□□□ -0.94
TRAPPC1-203ENST00000571739 LRRC4Q9HBW1 653 aa9.15□□□□□ -0.94
TRAPPC1-203ENST00000571739 TRPV5Q9NQA5 729 aa9.15□□□□□ -0.94
TRAPPC1-203ENST00000571739 CYLDQ9NQC7 956 aa9.15□□□□□ -0.94
TRAPPC1-203ENST00000571739 TLR8Q9NR97 1041 aaKnown RBP9.15□□□□□ -0.94
TRAPPC1-203ENST00000571739 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.15□□□□□ -0.94
TRAPPC1-203ENST00000571739 CA14Q9ULX7 337 aa9.15□□□□□ -0.94
TRAPPC1-203ENST00000571739 PCDHGC3Q9UN70 934 aa9.15□□□□□ -0.94
TRAPPC1-203ENST00000571739 ARHGAP26Q9UNA1 814 aa9.15□□□□□ -0.94
TRAPPC1-203ENST00000571739 CPQQ9Y646 472 aa9.15□□□□□ -0.94
TRAPPC1-203ENST00000571739 COL4A3Q01955 1670 aa9.14□□□□□ -0.95
TRAPPC1-203ENST00000571739 YJEFN3A6XGL0 299 aa9.14□□□□□ -0.95
TRAPPC1-203ENST00000571739 PRR33A8MZF0 331 aa9.14□□□□□ -0.95
TRAPPC1-203ENST00000571739 E7ENQ6 273 aa9.14□□□□□ -0.95
TRAPPC1-203ENST00000571739 F8VZ95 297 aa9.14□□□□□ -0.95
TRAPPC1-203ENST00000571739 LEFTY2O00292 366 aa9.14□□□□□ -0.95
TRAPPC1-203ENST00000571739 MDM4O15151 490 aa9.14□□□□□ -0.95
TRAPPC1-203ENST00000571739 PI15O43692 258 aa9.14□□□□□ -0.95
TRAPPC1-203ENST00000571739 GREM1O60565 184 aa9.14□□□□□ -0.95
TRAPPC1-203ENST00000571739 TLR5O60602 858 aa9.14□□□□□ -0.95
TRAPPC1-203ENST00000571739 CKMP06732 381 aa9.14□□□□□ -0.95
TRAPPC1-203ENST00000571739 MBL2P11226 248 aaPredicted RBP9.14□□□□□ -0.95
TRAPPC1-203ENST00000571739 RARGP13631 454 aa9.14□□□□□ -0.95
TRAPPC1-203ENST00000571739 CD72P21854 359 aa9.14□□□□□ -0.95
TRAPPC1-203ENST00000571739 RFX1P22670 979 aa9.14□□□□□ -0.95
TRAPPC1-203ENST00000571739 ATP5C1P36542 298 aaKnown RBP9.14□□□□□ -0.95
TRAPPC1-203ENST00000571739 TUBP50607 506 aa9.14□□□□□ -0.95
TRAPPC1-203ENST00000571739 SLC8A3P57103 927 aa9.14□□□□□ -0.95
TRAPPC1-203ENST00000571739 STARD6P59095 220 aa9.14□□□□□ -0.95
TRAPPC1-203ENST00000571739 DAOAP59103 153 aa9.14□□□□□ -0.95
TRAPPC1-203ENST00000571739 FANCCQ00597 558 aa9.14□□□□□ -0.95
TRAPPC1-203ENST00000571739 TNK2Q07912 1038 aa9.14□□□□□ -0.95
TRAPPC1-203ENST00000571739 ADIGQ0VDE8 80 aa9.14□□□□□ -0.95
TRAPPC1-203ENST00000571739 ARHGAP29Q52LW3 1261 aa9.14□□□□□ -0.95
TRAPPC1-203ENST00000571739 TRIM68Q6AZZ1 485 aa9.14□□□□□ -0.95
TRAPPC1-203ENST00000571739 TMEM110Q86TL2 294 aa9.14□□□□□ -0.95
TRAPPC1-203ENST00000571739 NOP9Q86U38 636 aaKnown RBP9.14□□□□□ -0.95
TRAPPC1-203ENST00000571739 SCUBE3Q8IX30 993 aa9.14□□□□□ -0.95
TRAPPC1-203ENST00000571739 ADGRG2Q8IZP9 1017 aa9.14□□□□□ -0.95
TRAPPC1-203ENST00000571739 SIX5Q8N196 739 aa9.14□□□□□ -0.95
TRAPPC1-203ENST00000571739 SCML4Q8N228 414 aa9.14□□□□□ -0.95
TRAPPC1-203ENST00000571739 TTC8Q8TAM2 541 aa9.14□□□□□ -0.95
TRAPPC1-203ENST00000571739 CLEC4CQ8WTT0 213 aa9.14□□□□□ -0.95
TRAPPC1-203ENST00000571739 STK32AQ8WU08 396 aa9.14□□□□□ -0.95
TRAPPC1-203ENST00000571739 IRF7Q92985 503 aa9.14□□□□□ -0.95
TRAPPC1-203ENST00000571739 KLF16Q9BXK1 252 aaPredicted RBP9.14□□□□□ -0.95
TRAPPC1-203ENST00000571739 LHX5Q9H2C1 402 aa9.14□□□□□ -0.95
TRAPPC1-203ENST00000571739 HPS4Q9NQG7 708 aa9.14□□□□□ -0.95
TRAPPC1-203ENST00000571739 HEBP1Q9NRV9 189 aa9.14□□□□□ -0.95
TRAPPC1-203ENST00000571739 SMPD4Q9NXE4 827 aa9.14□□□□□ -0.95
TRAPPC1-203ENST00000571739 GTSE1Q9NYZ3 720 aa9.14□□□□□ -0.95
TRAPPC1-203ENST00000571739 CLIC5Q9NZA1 410 aa9.14□□□□□ -0.95
TRAPPC1-203ENST00000571739 TJP2Q9UDY2 1190 aa9.14□□□□□ -0.95
TRAPPC1-203ENST00000571739 NAGPAQ9UK23 515 aa9.14□□□□□ -0.95
TRAPPC1-203ENST00000571739 NUP210Q8TEM1 1887 aaPredicted RBP9.13□□□□□ -0.95
TRAPPC1-203ENST00000571739 PATJQ8NI35 1801 aa9.13□□□□□ -0.95
TRAPPC1-203ENST00000571739 MED7O43513 233 aa9.13□□□□□ -0.95
TRAPPC1-203ENST00000571739 GFPT2O94808 682 aa9.13□□□□□ -0.95
TRAPPC1-203ENST00000571739 SERPINC1P01008 464 aa9.13□□□□□ -0.95
TRAPPC1-203ENST00000571739 FYNP06241 537 aa9.13□□□□□ -0.95
TRAPPC1-203ENST00000571739 ARSAP15289 507 aa9.13□□□□□ -0.95
TRAPPC1-203ENST00000571739 CHRNB2P17787 502 aa9.13□□□□□ -0.95
TRAPPC1-203ENST00000571739 SOX5P35711 763 aa9.13□□□□□ -0.95
TRAPPC1-203ENST00000571739 PBX1P40424 430 aa9.13□□□□□ -0.95
TRAPPC1-203ENST00000571739 PSEN1P49768 467 aa9.13□□□□□ -0.95
TRAPPC1-203ENST00000571739 BPIFB4P59827 614 aa9.13□□□□□ -0.95
TRAPPC1-203ENST00000571739 ZNF445P59923 1031 aa9.13□□□□□ -0.95
TRAPPC1-203ENST00000571739 YWHAGP61981 247 aaKnown RBP eCLIP9.13□□□□□ -0.95
TRAPPC1-203ENST00000571739 PFKPQ01813 784 aa9.13□□□□□ -0.95
TRAPPC1-203ENST00000571739 USP4Q13107 963 aa9.13□□□□□ -0.95
TRAPPC1-203ENST00000571739 FZD5Q13467 585 aa9.13□□□□□ -0.95
TRAPPC1-203ENST00000571739 MTF1Q14872 753 aa9.13□□□□□ -0.95
TRAPPC1-203ENST00000571739 MLF2Q15773 248 aaPredicted RBP9.13□□□□□ -0.95
TRAPPC1-203ENST00000571739 MEA1Q16626 185 aa9.13□□□□□ -0.95
TRAPPC1-203ENST00000571739 BSPRYQ5W0U4 402 aa9.13□□□□□ -0.95
TRAPPC1-203ENST00000571739 CWF19L1Q69YN2 538 aaKnown RBP9.13□□□□□ -0.95
TRAPPC1-203ENST00000571739 KLHDC10Q6PID8 442 aa9.13□□□□□ -0.95
TRAPPC1-203ENST00000571739 YAF2Q8IY57 180 aa9.13□□□□□ -0.95
TRAPPC1-203ENST00000571739 NEK11Q8NG66 645 aa9.13□□□□□ -0.95
TRAPPC1-203ENST00000571739 BAP1Q92560 729 aa9.13□□□□□ -0.95
TRAPPC1-203ENST00000571739 DNASE1L2Q92874 299 aa9.13□□□□□ -0.95
TRAPPC1-203ENST00000571739 CHFRQ96EP1 664 aa9.13□□□□□ -0.95
TRAPPC1-203ENST00000571739 PCMTD1Q96MG8 357 aaPredicted RBP9.13□□□□□ -0.95
TRAPPC1-203ENST00000571739 DDX23Q9BUQ8 820 aaKnown RBP9.13□□□□□ -0.95
TRAPPC1-203ENST00000571739 MIS12Q9H081 205 aa9.13□□□□□ -0.95
TRAPPC1-203ENST00000571739 TSPY26PQ9H489 355 aa9.13□□□□□ -0.95
TRAPPC1-203ENST00000571739 EBF3Q9H4W6 596 aa9.13□□□□□ -0.95
TRAPPC1-203ENST00000571739 KIF9Q9HAQ2 790 aa9.13□□□□□ -0.95
TRAPPC1-203ENST00000571739 CNGB3Q9NQW8 809 aa9.13□□□□□ -0.95
TRAPPC1-203ENST00000571739 ARHGEF3Q9NR81 526 aa9.13□□□□□ -0.95
TRAPPC1-203ENST00000571739 THG1LQ9NWX6 298 aaKnown RBP9.13□□□□□ -0.95
TRAPPC1-203ENST00000571739 FBXL21Q9UKT6 434 aa9.13□□□□□ -0.95
TRAPPC1-203ENST00000571739 MTF2Q9Y483 593 aaPredicted RBP9.13□□□□□ -0.95
TRAPPC1-203ENST00000571739 WNT6Q9Y6F9 365 aa9.13□□□□□ -0.95
TRAPPC1-203ENST00000571739 A0A1W2PQC6 194 aa9.12□□□□□ -0.95
TRAPPC1-203ENST00000571739 GOLGA6L19H0YKK7 550 aa9.12□□□□□ -0.95
TRAPPC1-203ENST00000571739 SCAMP3O14828 347 aaKnown RBP9.12□□□□□ -0.95
TRAPPC1-203ENST00000571739 PAPSS1O43252 624 aaPredicted RBP9.12□□□□□ -0.95
TRAPPC1-203ENST00000571739 MMEP08473 750 aa9.12□□□□□ -0.95
TRAPPC1-203ENST00000571739 RALAP11233 206 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms