RNA–Protein interactions for RNA: ENST00000571457.1

CHMP6-202, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-202ENST00000571457 NAT16Q8N8M0 369 aa12.07□□□□□ -0.48
CHMP6-202ENST00000571457 KRI1Q8N9T8 703 aaKnown RBP12.07□□□□□ -0.48
CHMP6-202ENST00000571457 PDZD8Q8NEN9 1154 aa12.07□□□□□ -0.48
CHMP6-202ENST00000571457 IPO4Q8TEX9 1081 aaKnown RBP12.07□□□□□ -0.48
CHMP6-202ENST00000571457 RAD54LQ92698 747 aa12.07□□□□□ -0.48
CHMP6-202ENST00000571457 CRTAC1Q9NQ79 661 aa12.07□□□□□ -0.48
CHMP6-202ENST00000571457 SH3BP1Q9Y3L3 701 aa12.07□□□□□ -0.48
CHMP6-202ENST00000571457 KIF3AQ9Y496 699 aa12.07□□□□□ -0.48
CHMP6-202ENST00000571457 PTPRQQ9UMZ3 2332 aa12.06□□□□□ -0.48
CHMP6-202ENST00000571457 MEI4A8MW99 385 aa12.06□□□□□ -0.48
CHMP6-202ENST00000571457 F8VP50 259 aa12.06□□□□□ -0.48
CHMP6-202ENST00000571457 PDGFRBP09619 1106 aa12.06□□□□□ -0.48
CHMP6-202ENST00000571457 GARTP22102 1010 aa12.06□□□□□ -0.48
CHMP6-202ENST00000571457 LMO2P25791 158 aa12.06□□□□□ -0.48
CHMP6-202ENST00000571457 YWHAQP27348 245 aa12.06□□□□□ -0.48
CHMP6-202ENST00000571457 CYP4F3Q08477 520 aa12.06□□□□□ -0.48
CHMP6-202ENST00000571457 MCM6Q14566 821 aa12.06□□□□□ -0.48
CHMP6-202ENST00000571457 MCTP1Q6DN14 999 aa12.06□□□□□ -0.48
CHMP6-202ENST00000571457 GRAMD4Q6IC98 578 aa12.06□□□□□ -0.48
CHMP6-202ENST00000571457 LIMS2Q7Z4I7 341 aa12.06□□□□□ -0.48
CHMP6-202ENST00000571457 CXorf38Q8TB03 319 aa12.06□□□□□ -0.48
CHMP6-202ENST00000571457 MYCBPAPQ8TBZ2 947 aa12.06□□□□□ -0.48
CHMP6-202ENST00000571457 SCFD1Q8WVM8 642 aa12.06□□□□□ -0.48
CHMP6-202ENST00000571457 KBTBD7Q8WVZ9 684 aa12.06□□□□□ -0.48
CHMP6-202ENST00000571457 DNASE2BQ8WZ79 361 aa12.06□□□□□ -0.48
CHMP6-202ENST00000571457 OVCA2Q8WZ82 227 aa12.06□□□□□ -0.48
CHMP6-202ENST00000571457 PCED1BQ96HM7 432 aa12.06□□□□□ -0.48
CHMP6-202ENST00000571457 HPDLQ96IR7 371 aa12.06□□□□□ -0.48
CHMP6-202ENST00000571457 ANKRD36BP1Q96IX9 119 aa12.06□□□□□ -0.48
CHMP6-202ENST00000571457 ACCSQ96QU6 501 aa12.06□□□□□ -0.48
CHMP6-202ENST00000571457 GABRG3Q99928 467 aa12.06□□□□□ -0.48
CHMP6-202ENST00000571457 SPHK2Q9NRA0 654 aa12.06□□□□□ -0.48
CHMP6-202ENST00000571457 BLOC1S4Q9NUP1 217 aa12.06□□□□□ -0.48
CHMP6-202ENST00000571457 SEL1LQ9UBV2 794 aa12.06□□□□□ -0.48
CHMP6-202ENST00000571457 PCDHGB2Q9Y5G2 931 aa12.06□□□□□ -0.48
CHMP6-202ENST00000571457 HECTD1Q9ULT8 2610 aa12.05□□□□□ -0.48
CHMP6-202ENST00000571457 TRABD2BA6NFA1 517 aa12.05□□□□□ -0.48
CHMP6-202ENST00000571457 E9PAM4 449 aa12.05□□□□□ -0.48
CHMP6-202ENST00000571457 GFRA2O00451 464 aa12.05□□□□□ -0.48
CHMP6-202ENST00000571457 FLRT2O43155 660 aa12.05□□□□□ -0.48
CHMP6-202ENST00000571457 RTN3O95197 1032 aaPredicted RBP12.05□□□□□ -0.48
CHMP6-202ENST00000571457 WARSP23381 471 aaKnown RBP12.05□□□□□ -0.48
CHMP6-202ENST00000571457 CD6P30203 668 aa12.05□□□□□ -0.48
CHMP6-202ENST00000571457 MATKP42679 507 aa12.05□□□□□ -0.48
CHMP6-202ENST00000571457 ABCG1P45844 678 aa12.05□□□□□ -0.48
CHMP6-202ENST00000571457 SUZ12Q15022 739 aaKnown RBP12.05□□□□□ -0.48
CHMP6-202ENST00000571457 MDH1BQ5I0G3 518 aa12.05□□□□□ -0.48
CHMP6-202ENST00000571457 HECTD3Q5T447 861 aa12.05□□□□□ -0.48
CHMP6-202ENST00000571457 EGFLAMQ63HQ2 1017 aa12.05□□□□□ -0.48
CHMP6-202ENST00000571457 KIAA1324Q6UXG2 1013 aaKnown RBP12.05□□□□□ -0.48
CHMP6-202ENST00000571457 HS2ST1Q7LGA3 356 aa12.05□□□□□ -0.48
CHMP6-202ENST00000571457 METTL3Q86U44 580 aaKnown RBP12.05□□□□□ -0.48
CHMP6-202ENST00000571457 MIB1Q86YT6 1006 aa12.05□□□□□ -0.48
CHMP6-202ENST00000571457 PDCD7Q8N8D1 485 aaKnown RBP12.05□□□□□ -0.48
CHMP6-202ENST00000571457 CADM4Q8NFZ8 388 aa12.05□□□□□ -0.48
CHMP6-202ENST00000571457 LARP4BQ92615 738 aaKnown RBP12.05□□□□□ -0.48
CHMP6-202ENST00000571457 SAAL1Q96ER3 474 aa12.05□□□□□ -0.48
CHMP6-202ENST00000571457 MRGPRX1Q96LB2 322 aa12.05□□□□□ -0.48
CHMP6-202ENST00000571457 XPO6Q96QU8 1125 aaKnown RBP12.05□□□□□ -0.48
CHMP6-202ENST00000571457 MTMR12Q9C0I1 747 aa12.05□□□□□ -0.48
CHMP6-202ENST00000571457 ELOVL4Q9GZR5 314 aa12.05□□□□□ -0.48
CHMP6-202ENST00000571457 SNX25Q9H3E2 840 aa12.05□□□□□ -0.48
CHMP6-202ENST00000571457 GAREM1Q9H706 876 aa12.05□□□□□ -0.48
CHMP6-202ENST00000571457 MRPL44Q9H9J2 332 aaKnown RBP12.05□□□□□ -0.48
CHMP6-202ENST00000571457 CD248Q9HCU0 757 aa12.05□□□□□ -0.48
CHMP6-202ENST00000571457 TM7SF3Q9NS93 570 aa12.05□□□□□ -0.48
CHMP6-202ENST00000571457 DNAJC17Q9NVM6 304 aaKnown RBP12.05□□□□□ -0.48
CHMP6-202ENST00000571457 SIX4Q9UIU6 781 aa12.05□□□□□ -0.48
CHMP6-202ENST00000571457 CILPO75339 1184 aa12.04□□□□□ -0.48
CHMP6-202ENST00000571457 DKK1O94907 266 aa12.04□□□□□ -0.48
CHMP6-202ENST00000571457 TNNC2P02585 160 aa12.04□□□□□ -0.48
CHMP6-202ENST00000571457 MAOBP27338 520 aa12.04□□□□□ -0.48
CHMP6-202ENST00000571457 GNL1P36915 607 aaPredicted RBP12.04□□□□□ -0.48
CHMP6-202ENST00000571457 TUBP50607 506 aa12.04□□□□□ -0.48
CHMP6-202ENST00000571457 WNT7BP56706 349 aa12.04□□□□□ -0.48
CHMP6-202ENST00000571457 STARD3Q14849 445 aa12.04□□□□□ -0.48
CHMP6-202ENST00000571457 L1TD1Q5T7N2 865 aaKnown RBP12.04□□□□□ -0.48
CHMP6-202ENST00000571457 SFR1Q86XK3 245 aa12.04□□□□□ -0.48
CHMP6-202ENST00000571457 TMEM25Q86YD3 366 aa12.04□□□□□ -0.48
CHMP6-202ENST00000571457 BBS7Q8IWZ6 715 aa12.04□□□□□ -0.48
CHMP6-202ENST00000571457 SYCP3Q8IZU3 236 aa12.04□□□□□ -0.48
CHMP6-202ENST00000571457 NUP93Q8N1F7 819 aa12.04□□□□□ -0.48
CHMP6-202ENST00000571457 ZCCHC9Q8N567 271 aaKnown RBP12.04□□□□□ -0.48
CHMP6-202ENST00000571457 LSM14AQ8ND56 463 aaKnown RBP12.04□□□□□ -0.48
CHMP6-202ENST00000571457 ENGASEQ8NFI3 743 aa12.04□□□□□ -0.48
CHMP6-202ENST00000571457 BAHD1Q8TBE0 780 aaPredicted RBP12.04□□□□□ -0.48
CHMP6-202ENST00000571457 RHBDD1Q8TEB9 315 aa12.04□□□□□ -0.48
CHMP6-202ENST00000571457 SLC39A7Q92504 469 aa12.04□□□□□ -0.48
CHMP6-202ENST00000571457 FBXO32Q969P5 355 aa12.04□□□□□ -0.48
CHMP6-202ENST00000571457 ZFRQ96KR1 1074 aaKnown RBP12.04□□□□□ -0.48
CHMP6-202ENST00000571457 MMS19Q96T76 1030 aa12.04□□□□□ -0.48
CHMP6-202ENST00000571457 ACOX2Q99424 681 aa12.04□□□□□ -0.48
CHMP6-202ENST00000571457 NACA2Q9H009 215 aa12.04□□□□□ -0.48
CHMP6-202ENST00000571457 MIR1-1HGQ9H1L0 117 aa12.04□□□□□ -0.48
CHMP6-202ENST00000571457 IKZF4Q9H2S9 585 aa12.04□□□□□ -0.48
CHMP6-202ENST00000571457 PRDM16Q9HAZ2 1276 aa12.04□□□□□ -0.48
CHMP6-202ENST00000571457 PDE11AQ9HCR9 933 aa12.04□□□□□ -0.48
CHMP6-202ENST00000571457 WDR35Q9P2L0 1181 aa12.04□□□□□ -0.48
CHMP6-202ENST00000571457 HCN2Q9UL51 889 aa12.04□□□□□ -0.48
CHMP6-202ENST00000571457 PCDHB13Q9Y5F0 798 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms