RNA–Protein interactions for RNA: ENST00000568158.1

CNOT1-213, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-213ENST00000568158 PFKPQ01813 784 aa13.69□□□□□ -0.22
CNOT1-213ENST00000568158 PTK2Q05397 1052 aa13.69□□□□□ -0.22
CNOT1-213ENST00000568158 STILQ15468 1287 aa13.69□□□□□ -0.22
CNOT1-213ENST00000568158 ARHGAP29Q52LW3 1261 aa13.69□□□□□ -0.22
CNOT1-213ENST00000568158 TRIM68Q6AZZ1 485 aa13.69□□□□□ -0.22
CNOT1-213ENST00000568158 CCDC186Q7Z3E2 898 aa13.69□□□□□ -0.22
CNOT1-213ENST00000568158 SLC47A2Q86VL8 602 aa13.69□□□□□ -0.22
CNOT1-213ENST00000568158 FAM71AQ8IYT1 594 aa13.69□□□□□ -0.22
CNOT1-213ENST00000568158 WDTC1Q8N5D0 677 aa13.69□□□□□ -0.22
CNOT1-213ENST00000568158 FLCNQ8NFG4 579 aa13.69□□□□□ -0.22
CNOT1-213ENST00000568158 KCTD13Q8WZ19 329 aa13.69□□□□□ -0.22
CNOT1-213ENST00000568158 WBP2Q969T9 261 aa13.69□□□□□ -0.22
CNOT1-213ENST00000568158 NAP1L5Q96NT1 182 aaPredicted RBP13.69□□□□□ -0.22
CNOT1-213ENST00000568158 STK33Q9BYT3 514 aa13.69□□□□□ -0.22
CNOT1-213ENST00000568158 MFSD1Q9H3U5 465 aa13.69□□□□□ -0.22
CNOT1-213ENST00000568158 NLRC4Q9NPP4 1024 aa13.69□□□□□ -0.22
CNOT1-213ENST00000568158 RTN4Q9NQC3 1192 aaKnown RBP13.69□□□□□ -0.22
CNOT1-213ENST00000568158 FAM207AQ9NSI2 230 aaPredicted RBP13.69□□□□□ -0.22
CNOT1-213ENST00000568158 THG1LQ9NWX6 298 aaKnown RBP13.69□□□□□ -0.22
CNOT1-213ENST00000568158 NAGPAQ9UK23 515 aa13.69□□□□□ -0.22
CNOT1-213ENST00000568158 ARHGAP26Q9UNA1 814 aa13.69□□□□□ -0.22
CNOT1-213ENST00000568158 CPQQ9Y646 472 aa13.69□□□□□ -0.22
CNOT1-213ENST00000568158 COL4A3Q01955 1670 aa13.69□□□□□ -0.22
CNOT1-213ENST00000568158 MYO16Q9Y6X6 1858 aa13.68□□□□□ -0.22
CNOT1-213ENST00000568158 ARNTLO00327 626 aa13.68□□□□□ -0.22
CNOT1-213ENST00000568158 MDM4O15151 490 aa13.68□□□□□ -0.22
CNOT1-213ENST00000568158 MED7O43513 233 aa13.68□□□□□ -0.22
CNOT1-213ENST00000568158 ZBED1O96006 694 aa13.68□□□□□ -0.22
CNOT1-213ENST00000568158 SETSIPP0DME0 302 aa13.68□□□□□ -0.22
CNOT1-213ENST00000568158 PFKLP17858 780 aa13.68□□□□□ -0.22
CNOT1-213ENST00000568158 POLR2FP61218 127 aaKnown RBP13.68□□□□□ -0.22
CNOT1-213ENST00000568158 TNK2Q07912 1038 aa13.68□□□□□ -0.22
CNOT1-213ENST00000568158 ADIGQ0VDE8 80 aa13.68□□□□□ -0.22
CNOT1-213ENST00000568158 MLF2Q15773 248 aaPredicted RBP13.68□□□□□ -0.22
CNOT1-213ENST00000568158 ZNF77Q15935 545 aa13.68□□□□□ -0.22
CNOT1-213ENST00000568158 PM20D1Q6GTS8 502 aa13.68□□□□□ -0.22
CNOT1-213ENST00000568158 FBXL6Q8N531 539 aa13.68□□□□□ -0.22
CNOT1-213ENST00000568158 ERGIC2Q96RQ1 377 aa13.68□□□□□ -0.22
CNOT1-213ENST00000568158 FAM83CQ9BQN1 747 aa13.68□□□□□ -0.22
CNOT1-213ENST00000568158 KIF9Q9HAQ2 790 aa13.68□□□□□ -0.22
CNOT1-213ENST00000568158 ARHGEF3Q9NR81 526 aa13.68□□□□□ -0.22
CNOT1-213ENST00000568158 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.68□□□□□ -0.22
CNOT1-213ENST00000568158 GTSE1Q9NYZ3 720 aa13.68□□□□□ -0.22
CNOT1-213ENST00000568158 CYTH4Q9UIA0 394 aa13.68□□□□□ -0.22
CNOT1-213ENST00000568158 TICRRQ7Z2Z1 1910 aa13.67□□□□□ -0.22
CNOT1-213ENST00000568158 SHISA7A6NL88 538 aa13.67□□□□□ -0.22
CNOT1-213ENST00000568158 SCAMP3O14828 347 aaKnown RBP13.67□□□□□ -0.22
CNOT1-213ENST00000568158 TLR5O60602 858 aa13.67□□□□□ -0.22
CNOT1-213ENST00000568158 ARSAP15289 507 aa13.67□□□□□ -0.22
CNOT1-213ENST00000568158 ATP5C1P36542 298 aaKnown RBP13.67□□□□□ -0.22
CNOT1-213ENST00000568158 SOX9P48436 509 aa13.67□□□□□ -0.22
CNOT1-213ENST00000568158 PDE6CP51160 858 aa13.67□□□□□ -0.22
CNOT1-213ENST00000568158 VCPP55072 806 aaKnown RBP13.67□□□□□ -0.22
CNOT1-213ENST00000568158 STARD6P59095 220 aa13.67□□□□□ -0.22
CNOT1-213ENST00000568158 MTF1Q14872 753 aa13.67□□□□□ -0.22
CNOT1-213ENST00000568158 CC2D1AQ6P1N0 951 aaPredicted RBP13.67□□□□□ -0.22
CNOT1-213ENST00000568158 BHLHA9Q7RTU4 235 aa13.67□□□□□ -0.22
CNOT1-213ENST00000568158 NEK11Q8NG66 645 aa13.67□□□□□ -0.22
CNOT1-213ENST00000568158 CSGALNACT1Q8TDX6 532 aa13.67□□□□□ -0.22
CNOT1-213ENST00000568158 CLEC4CQ8WTT0 213 aa13.67□□□□□ -0.22
CNOT1-213ENST00000568158 DNASE1L2Q92874 299 aa13.67□□□□□ -0.22
CNOT1-213ENST00000568158 ZFRQ96KR1 1074 aaKnown RBP13.67□□□□□ -0.22
CNOT1-213ENST00000568158 HSFY1Q96LI6 401 aa13.67□□□□□ -0.22
CNOT1-213ENST00000568158 KLF16Q9BXK1 252 aaPredicted RBP13.67□□□□□ -0.22
CNOT1-213ENST00000568158 MIS12Q9H081 205 aa13.67□□□□□ -0.22
CNOT1-213ENST00000568158 EBF3Q9H4W6 596 aa13.67□□□□□ -0.22
CNOT1-213ENST00000568158 TBC1D17Q9HA65 648 aa13.67□□□□□ -0.22
CNOT1-213ENST00000568158 TRPV5Q9NQA5 729 aa13.67□□□□□ -0.22
CNOT1-213ENST00000568158 HPS4Q9NQG7 708 aa13.67□□□□□ -0.22
CNOT1-213ENST00000568158 DUS2Q9NX74 493 aaKnown RBP13.67□□□□□ -0.22
CNOT1-213ENST00000568158 CFAP97Q9P2B7 532 aa13.67□□□□□ -0.22
CNOT1-213ENST00000568158 MTF2Q9Y483 593 aaPredicted RBP13.67□□□□□ -0.22
CNOT1-213ENST00000568158 WNT6Q9Y6F9 365 aa13.67□□□□□ -0.22
CNOT1-213ENST00000568158 KIF26AQ9ULI4 1882 aaPredicted RBP13.67□□□□□ -0.22
CNOT1-213ENST00000568158 OTOL1A6NHN0 477 aaPredicted RBP13.66□□□□□ -0.22
CNOT1-213ENST00000568158 YJEFN3A6XGL0 299 aa13.66□□□□□ -0.22
CNOT1-213ENST00000568158 E7ENQ6 273 aa13.66□□□□□ -0.22
CNOT1-213ENST00000568158 GFPT2O94808 682 aa13.66□□□□□ -0.22
CNOT1-213ENST00000568158 SERPINC1P01008 464 aa13.66□□□□□ -0.22
CNOT1-213ENST00000568158 IRF1P10914 325 aa13.66□□□□□ -0.22
CNOT1-213ENST00000568158 RALAP11233 206 aa13.66□□□□□ -0.22
CNOT1-213ENST00000568158 TCF3P15923 654 aa13.66□□□□□ -0.22
CNOT1-213ENST00000568158 AVPR2P30518 371 aa13.66□□□□□ -0.22
CNOT1-213ENST00000568158 KRT9P35527 623 aa13.66□□□□□ -0.22
CNOT1-213ENST00000568158 PSEN1P49768 467 aa13.66□□□□□ -0.22
CNOT1-213ENST00000568158 TUBP50607 506 aa13.66□□□□□ -0.22
CNOT1-213ENST00000568158 DAOAP59103 153 aa13.66□□□□□ -0.22
CNOT1-213ENST00000568158 BPIFB4P59827 614 aa13.66□□□□□ -0.22
CNOT1-213ENST00000568158 YWHAGP61981 247 aaKnown RBP eCLIP13.66□□□□□ -0.22
CNOT1-213ENST00000568158 FANCCQ00597 558 aa13.66□□□□□ -0.22
CNOT1-213ENST00000568158 PLCB2Q00722 1185 aa13.66□□□□□ -0.22
CNOT1-213ENST00000568158 PRKCQQ04759 706 aa13.66□□□□□ -0.22
CNOT1-213ENST00000568158 USP4Q13107 963 aa13.66□□□□□ -0.22
CNOT1-213ENST00000568158 RUNX3Q13761 415 aa13.66□□□□□ -0.22
CNOT1-213ENST00000568158 NR1I3Q14994 352 aa13.66□□□□□ -0.22
CNOT1-213ENST00000568158 FILIP1LQ4L180 1135 aa13.66□□□□□ -0.22
CNOT1-213ENST00000568158 C10orf120Q5SQS8 335 aa13.66□□□□□ -0.22
CNOT1-213ENST00000568158 BTBD8Q5XKL5 378 aa13.66□□□□□ -0.22
CNOT1-213ENST00000568158 CWF19L1Q69YN2 538 aaKnown RBP13.66□□□□□ -0.22
CNOT1-213ENST00000568158 LRSAM1Q6UWE0 723 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms