RNA–Protein interactions for RNA: ENST00000567720.5

COMMD4-220, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-220ENST00000567720 RPL34P49207 117 aaKnown RBP18.1■□□□□ 0.49
COMMD4-220ENST00000567720 UBASH3AP57075 661 aa18.1■□□□□ 0.49
COMMD4-220ENST00000567720 GPC5P78333 572 aa18.1■□□□□ 0.49
COMMD4-220ENST00000567720 SLC7A9P82251 487 aa18.1■□□□□ 0.49
COMMD4-220ENST00000567720 PDCLQ13371 301 aa18.1■□□□□ 0.49
COMMD4-220ENST00000567720 HECTD3Q5T447 861 aa18.1■□□□□ 0.49
COMMD4-220ENST00000567720 PM20D1Q6GTS8 502 aa18.1■□□□□ 0.49
COMMD4-220ENST00000567720 MFSD6LQ8IWD5 586 aa18.1■□□□□ 0.49
COMMD4-220ENST00000567720 SIX6OS1Q8N1H7 587 aa18.1■□□□□ 0.49
COMMD4-220ENST00000567720 CELF5Q8N6W0 485 aaKnown RBP18.1■□□□□ 0.49
COMMD4-220ENST00000567720 C1orf131Q8NDD1 294 aaKnown RBP18.1■□□□□ 0.49
COMMD4-220ENST00000567720 CLEC4CQ8WTT0 213 aa18.1■□□□□ 0.49
COMMD4-220ENST00000567720 SLC20A1Q8WUM9 679 aa18.1■□□□□ 0.49
COMMD4-220ENST00000567720 BAP1Q92560 729 aa18.1■□□□□ 0.49
COMMD4-220ENST00000567720 NDRG1Q92597 394 aaKnown RBP18.1■□□□□ 0.49
COMMD4-220ENST00000567720 E2F7Q96AV8 911 aa18.1■□□□□ 0.49
COMMD4-220ENST00000567720 ASIC4Q96FT7 647 aa18.1■□□□□ 0.49
COMMD4-220ENST00000567720 C11orf16Q9NQ32 467 aa18.1■□□□□ 0.49
COMMD4-220ENST00000567720 CYLDQ9NQC7 956 aa18.1■□□□□ 0.49
COMMD4-220ENST00000567720 SLC2A4RGQ9NR83 387 aa18.1■□□□□ 0.49
COMMD4-220ENST00000567720 TJP2Q9UDY2 1190 aa18.1■□□□□ 0.49
COMMD4-220ENST00000567720 NAGPAQ9UK23 515 aa18.1■□□□□ 0.49
COMMD4-220ENST00000567720 NOCTQ9UK39 431 aaKnown RBP18.1■□□□□ 0.49
COMMD4-220ENST00000567720 CPQQ9Y646 472 aa18.1■□□□□ 0.49
COMMD4-220ENST00000567720 MYOFQ9NZM1 2061 aa18.1■□□□□ 0.49
COMMD4-220ENST00000567720 ZDBF2Q9HCK1 2354 aa18.09■□□□□ 0.49
COMMD4-220ENST00000567720 ARNTLO00327 626 aa18.09■□□□□ 0.49
COMMD4-220ENST00000567720 DPYSL4O14531 572 aa18.09■□□□□ 0.49
COMMD4-220ENST00000567720 STAT1P42224 750 aa18.09■□□□□ 0.49
COMMD4-220ENST00000567720 DAOAP59103 153 aa18.09■□□□□ 0.49
COMMD4-220ENST00000567720 BPIFB4P59827 614 aa18.09■□□□□ 0.49
COMMD4-220ENST00000567720 SIGLEC14Q08ET2 396 aa18.09■□□□□ 0.49
COMMD4-220ENST00000567720 IER5LQ5T953 404 aa18.09■□□□□ 0.49
COMMD4-220ENST00000567720 TAF3Q5VWG9 929 aa18.09■□□□□ 0.49
COMMD4-220ENST00000567720 WDTC1Q8N5D0 677 aa18.09■□□□□ 0.49
COMMD4-220ENST00000567720 BPIFB1Q8TDL5 484 aa18.09■□□□□ 0.49
COMMD4-220ENST00000567720 HSFY1Q96LI6 401 aa18.09■□□□□ 0.49
COMMD4-220ENST00000567720 CNGB3Q9NQW8 809 aa18.09■□□□□ 0.49
COMMD4-220ENST00000567720 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.09■□□□□ 0.49
COMMD4-220ENST00000567720 SMPD4Q9NXE4 827 aa18.09■□□□□ 0.49
COMMD4-220ENST00000567720 FAM86C2PA6NEL3 165 aa18.08■□□□□ 0.48
COMMD4-220ENST00000567720 YJEFN3A6XGL0 299 aa18.08■□□□□ 0.48
COMMD4-220ENST00000567720 E5RJQ4 531 aa18.08■□□□□ 0.48
COMMD4-220ENST00000567720 E7ENQ6 273 aa18.08■□□□□ 0.48
COMMD4-220ENST00000567720 MDM4O15151 490 aa18.08■□□□□ 0.48
COMMD4-220ENST00000567720 MBL2P11226 248 aaPredicted RBP18.08■□□□□ 0.48
COMMD4-220ENST00000567720 RARGP13631 454 aa18.08■□□□□ 0.48
COMMD4-220ENST00000567720 TCF3P15923 654 aa18.08■□□□□ 0.48
COMMD4-220ENST00000567720 GDI1P31150 447 aa18.08■□□□□ 0.48
COMMD4-220ENST00000567720 YWHAGP61981 247 aaKnown RBP eCLIP18.08■□□□□ 0.48
COMMD4-220ENST00000567720 MTF1Q14872 753 aa18.08■□□□□ 0.48
COMMD4-220ENST00000567720 TRIM67Q6ZTA4 783 aa18.08■□□□□ 0.48
COMMD4-220ENST00000567720 CACNA2D4Q7Z3S7 1137 aa18.08■□□□□ 0.48
COMMD4-220ENST00000567720 SCML4Q8N228 414 aa18.08■□□□□ 0.48
COMMD4-220ENST00000567720 SH3RF2Q8TEC5 729 aa18.08■□□□□ 0.48
COMMD4-220ENST00000567720 STK32AQ8WU08 396 aa18.08■□□□□ 0.48
COMMD4-220ENST00000567720 ZFYVE19Q96K21 471 aa18.08■□□□□ 0.48
COMMD4-220ENST00000567720 CPXM1Q96SM3 734 aa18.08■□□□□ 0.48
COMMD4-220ENST00000567720 TRMT61BQ9BVS5 477 aaKnown RBP18.08■□□□□ 0.48
COMMD4-220ENST00000567720 SLC4A5Q9BY07 1137 aa18.08■□□□□ 0.48
COMMD4-220ENST00000567720 XPO4Q9C0E2 1151 aaKnown RBP18.08■□□□□ 0.48
COMMD4-220ENST00000567720 ST7Q9NRC1 585 aa18.08■□□□□ 0.48
COMMD4-220ENST00000567720 CLIC5Q9NZA1 410 aa18.08■□□□□ 0.48
COMMD4-220ENST00000567720 NUDT5Q9UKK9 219 aa18.08■□□□□ 0.48
COMMD4-220ENST00000567720 ZNF318Q5VUA4 2279 aa18.08■□□□□ 0.48
COMMD4-220ENST00000567720 LEFTY2O00292 366 aa18.07■□□□□ 0.48
COMMD4-220ENST00000567720 TBX18O95935 607 aa18.07■□□□□ 0.48
COMMD4-220ENST00000567720 MMEP08473 750 aa18.07■□□□□ 0.48
COMMD4-220ENST00000567720 KRT9P35527 623 aa18.07■□□□□ 0.48
COMMD4-220ENST00000567720 PSEN1P49768 467 aa18.07■□□□□ 0.48
COMMD4-220ENST00000567720 PTPN20Q4JDL3 420 aa18.07■□□□□ 0.48
COMMD4-220ENST00000567720 E4F1Q66K89 784 aaPredicted RBP18.07■□□□□ 0.48
COMMD4-220ENST00000567720 HFE2Q6ZVN8 426 aa18.07■□□□□ 0.48
COMMD4-220ENST00000567720 TTC16Q8NEE8 873 aa18.07■□□□□ 0.48
COMMD4-220ENST00000567720 PIWIL1Q96J94 861 aaKnown RBP18.07■□□□□ 0.48
COMMD4-220ENST00000567720 LHX5Q9H2C1 402 aa18.07■□□□□ 0.48
COMMD4-220ENST00000567720 BRD9Q9H8M2 597 aa18.07■□□□□ 0.48
COMMD4-220ENST00000567720 F5P12259 2224 aa18.07■□□□□ 0.48
COMMD4-220ENST00000567720 FAM170AA1A519 330 aa18.06■□□□□ 0.48
COMMD4-220ENST00000567720 KRBA1A5PL33 1030 aa18.06■□□□□ 0.48
COMMD4-220ENST00000567720 LRRC53A6NM62 1247 aa18.06■□□□□ 0.48
COMMD4-220ENST00000567720 CHADO15335 359 aa18.06■□□□□ 0.48
COMMD4-220ENST00000567720 PAPSS1O43252 624 aaPredicted RBP18.06■□□□□ 0.48
COMMD4-220ENST00000567720 CHRNB2P17787 502 aa18.06■□□□□ 0.48
COMMD4-220ENST00000567720 CDH5P33151 784 aaPredicted RBP18.06■□□□□ 0.48
COMMD4-220ENST00000567720 FMO1Q01740 532 aa18.06■□□□□ 0.48
COMMD4-220ENST00000567720 ARID5AQ03989 594 aa18.06■□□□□ 0.48
COMMD4-220ENST00000567720 FIGNQ5HY92 759 aa18.06■□□□□ 0.48
COMMD4-220ENST00000567720 YAF2Q8IY57 180 aa18.06■□□□□ 0.48
COMMD4-220ENST00000567720 ARHGAP18Q8N392 663 aa18.06■□□□□ 0.48
COMMD4-220ENST00000567720 OLIG1Q8TAK6 271 aa18.06■□□□□ 0.48
COMMD4-220ENST00000567720 DNASE1L2Q92874 299 aa18.06■□□□□ 0.48
COMMD4-220ENST00000567720 MIS12Q9H081 205 aa18.06■□□□□ 0.48
COMMD4-220ENST00000567720 ARHGEF3Q9NR81 526 aa18.06■□□□□ 0.48
COMMD4-220ENST00000567720 CA14Q9ULX7 337 aa18.06■□□□□ 0.48
COMMD4-220ENST00000567720 TMEM221A6NGB7 291 aa18.05■□□□□ 0.48
COMMD4-220ENST00000567720 M0R296 226 aa18.05■□□□□ 0.48
COMMD4-220ENST00000567720 SCAMP3O14828 347 aaKnown RBP18.05■□□□□ 0.48
COMMD4-220ENST00000567720 ZNF263O14978 683 aa18.05■□□□□ 0.48
COMMD4-220ENST00000567720 FBXO21O94952 628 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms