RNA–Protein interactions for RNA: ENST00000567365.2

RNF40-211, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-211ENST00000567365 COL4A3Q01955 1670 aa13.06□□□□□ -0.32
RNF40-211ENST00000567365 TICRRQ7Z2Z1 1910 aa13.06□□□□□ -0.32
RNF40-211ENST00000567365 A0A1W2PQH9 124 aa13.06□□□□□ -0.32
RNF40-211ENST00000567365 COCHO43405 550 aa13.06□□□□□ -0.32
RNF40-211ENST00000567365 THAP12O43422 761 aa13.06□□□□□ -0.32
RNF40-211ENST00000567365 USP17L7P0C7H9 530 aa13.06□□□□□ -0.32
RNF40-211ENST00000567365 CYP11B1P15538 503 aa13.06□□□□□ -0.32
RNF40-211ENST00000567365 AVPR1AP37288 418 aa13.06□□□□□ -0.32
RNF40-211ENST00000567365 PSEN1P49768 467 aa13.06□□□□□ -0.32
RNF40-211ENST00000567365 SLC8A3P57103 927 aa13.06□□□□□ -0.32
RNF40-211ENST00000567365 DAOAP59103 153 aa13.06□□□□□ -0.32
RNF40-211ENST00000567365 PTK2Q05397 1052 aa13.06□□□□□ -0.32
RNF40-211ENST00000567365 HECTD3Q5T447 861 aa13.06□□□□□ -0.32
RNF40-211ENST00000567365 KLHDC10Q6PID8 442 aa13.06□□□□□ -0.32
RNF40-211ENST00000567365 BMP8AQ7Z5Y6 402 aa13.06□□□□□ -0.32
RNF40-211ENST00000567365 TMEM110Q86TL2 294 aa13.06□□□□□ -0.32
RNF40-211ENST00000567365 KIAA1958Q8N8K9 716 aa13.06□□□□□ -0.32
RNF40-211ENST00000567365 EPS8L1Q8TE68 723 aa13.06□□□□□ -0.32
RNF40-211ENST00000567365 BAP1Q92560 729 aa13.06□□□□□ -0.32
RNF40-211ENST00000567365 FAM83CQ9BQN1 747 aa13.06□□□□□ -0.32
RNF40-211ENST00000567365 TRMT61BQ9BVS5 477 aaKnown RBP13.06□□□□□ -0.32
RNF40-211ENST00000567365 ULBP1Q9BZM6 244 aa13.06□□□□□ -0.32
RNF40-211ENST00000567365 CCSER2Q9H7U1 834 aa13.06□□□□□ -0.32
RNF40-211ENST00000567365 NLRC4Q9NPP4 1024 aa13.06□□□□□ -0.32
RNF40-211ENST00000567365 CNGB3Q9NQW8 809 aa13.06□□□□□ -0.32
RNF40-211ENST00000567365 TLR8Q9NR97 1041 aaKnown RBP13.06□□□□□ -0.32
RNF40-211ENST00000567365 WNT16Q9UBV4 365 aa13.06□□□□□ -0.32
RNF40-211ENST00000567365 NOCTQ9UK39 431 aaKnown RBP13.06□□□□□ -0.32
RNF40-211ENST00000567365 ZNF318Q5VUA4 2279 aa13.06□□□□□ -0.32
RNF40-211ENST00000567365 KRBA1A5PL33 1030 aa13.05□□□□□ -0.32
RNF40-211ENST00000567365 CHADO15335 359 aa13.05□□□□□ -0.32
RNF40-211ENST00000567365 MED7O43513 233 aa13.05□□□□□ -0.32
RNF40-211ENST00000567365 TLR5O60602 858 aa13.05□□□□□ -0.32
RNF40-211ENST00000567365 ZBED1O96006 694 aa13.05□□□□□ -0.32
RNF40-211ENST00000567365 CKMP06732 381 aa13.05□□□□□ -0.32
RNF40-211ENST00000567365 SOX5P35711 763 aa13.05□□□□□ -0.32
RNF40-211ENST00000567365 USP8P40818 1118 aa13.05□□□□□ -0.32
RNF40-211ENST00000567365 RGS7P49802 495 aa13.05□□□□□ -0.32
RNF40-211ENST00000567365 MRE11P49959 708 aa13.05□□□□□ -0.32
RNF40-211ENST00000567365 PDE6CP51160 858 aa13.05□□□□□ -0.32
RNF40-211ENST00000567365 BPIFB4P59827 614 aa13.05□□□□□ -0.32
RNF40-211ENST00000567365 NHLH1Q02575 133 aa13.05□□□□□ -0.32
RNF40-211ENST00000567365 ADIGQ0VDE8 80 aa13.05□□□□□ -0.32
RNF40-211ENST00000567365 GRM2Q14416 872 aa13.05□□□□□ -0.32
RNF40-211ENST00000567365 FILIP1LQ4L180 1135 aa13.05□□□□□ -0.32
RNF40-211ENST00000567365 FIGNQ5HY92 759 aa13.05□□□□□ -0.32
RNF40-211ENST00000567365 HFE2Q6ZVN8 426 aa13.05□□□□□ -0.32
RNF40-211ENST00000567365 NOP9Q86U38 636 aaKnown RBP13.05□□□□□ -0.32
RNF40-211ENST00000567365 NEK11Q8NG66 645 aa13.05□□□□□ -0.32
RNF40-211ENST00000567365 OLIG1Q8TAK6 271 aa13.05□□□□□ -0.32
RNF40-211ENST00000567365 BPIFB1Q8TDL5 484 aa13.05□□□□□ -0.32
RNF40-211ENST00000567365 NDRG1Q92597 394 aaKnown RBP13.05□□□□□ -0.32
RNF40-211ENST00000567365 DNASE1L2Q92874 299 aa13.05□□□□□ -0.32
RNF40-211ENST00000567365 DDX23Q9BUQ8 820 aaKnown RBP13.05□□□□□ -0.32
RNF40-211ENST00000567365 LRRC4Q9HBW1 653 aa13.05□□□□□ -0.32
RNF40-211ENST00000567365 TRPC7Q9HCX4 862 aa13.05□□□□□ -0.32
RNF40-211ENST00000567365 MYO6Q9UM54 1294 aa13.05□□□□□ -0.32
RNF40-211ENST00000567365 TMEM221A6NGB7 291 aa13.04□□□□□ -0.32
RNF40-211ENST00000567365 YJEFN3A6XGL0 299 aa13.04□□□□□ -0.32
RNF40-211ENST00000567365 E7ENQ6 273 aa13.04□□□□□ -0.32
RNF40-211ENST00000567365 GOLGA6L19H0YKK7 550 aa13.04□□□□□ -0.32
RNF40-211ENST00000567365 M0R296 226 aa13.04□□□□□ -0.32
RNF40-211ENST00000567365 PAPSS1O43252 624 aaPredicted RBP13.04□□□□□ -0.32
RNF40-211ENST00000567365 GREM1O60565 184 aa13.04□□□□□ -0.32
RNF40-211ENST00000567365 TBX18O95935 607 aa13.04□□□□□ -0.32
RNF40-211ENST00000567365 CHRNB2P17787 502 aa13.04□□□□□ -0.32
RNF40-211ENST00000567365 GDI1P31150 447 aa13.04□□□□□ -0.32
RNF40-211ENST00000567365 MLLT6P55198 1093 aaPredicted RBP13.04□□□□□ -0.32
RNF40-211ENST00000567365 PDCLQ13371 301 aa13.04□□□□□ -0.32
RNF40-211ENST00000567365 ARHGAP29Q52LW3 1261 aa13.04□□□□□ -0.32
RNF40-211ENST00000567365 SH3RF2Q8TEC5 729 aa13.04□□□□□ -0.32
RNF40-211ENST00000567365 IRGQQ8WZA9 623 aa13.04□□□□□ -0.32
RNF40-211ENST00000567365 WBP2Q969T9 261 aa13.04□□□□□ -0.32
RNF40-211ENST00000567365 SYT11Q9BT88 431 aa13.04□□□□□ -0.32
RNF40-211ENST00000567365 LEFTY2O00292 366 aa13.03□□□□□ -0.32
RNF40-211ENST00000567365 GFPT2O94808 682 aa13.03□□□□□ -0.32
RNF40-211ENST00000567365 ABL1P00519 1130 aa13.03□□□□□ -0.32
RNF40-211ENST00000567365 SERPINC1P01008 464 aa13.03□□□□□ -0.32
RNF40-211ENST00000567365 PDGFBP01127 241 aaPredicted RBP13.03□□□□□ -0.32
RNF40-211ENST00000567365 FYNP06241 537 aa13.03□□□□□ -0.32
RNF40-211ENST00000567365 RARGP13631 454 aa13.03□□□□□ -0.32
RNF40-211ENST00000567365 STAT1P42224 750 aa13.03□□□□□ -0.32
RNF40-211ENST00000567365 UBASH3AP57075 661 aa13.03□□□□□ -0.32
RNF40-211ENST00000567365 TPM4P67936 248 aa13.03□□□□□ -0.32
RNF40-211ENST00000567365 PFKPQ01813 784 aa13.03□□□□□ -0.32
RNF40-211ENST00000567365 MTF1Q14872 753 aa13.03□□□□□ -0.32
RNF40-211ENST00000567365 IRF2BP2Q7Z5L9 587 aa13.03□□□□□ -0.32
RNF40-211ENST00000567365 ZNF677Q86XU0 584 aa13.03□□□□□ -0.32
RNF40-211ENST00000567365 ZNF687Q8N1G0 1237 aa13.03□□□□□ -0.32
RNF40-211ENST00000567365 ARHGAP18Q8N392 663 aa13.03□□□□□ -0.32
RNF40-211ENST00000567365 CLEC4CQ8WTT0 213 aa13.03□□□□□ -0.32
RNF40-211ENST00000567365 IRF7Q92985 503 aa13.03□□□□□ -0.32
RNF40-211ENST00000567365 CHFRQ96EP1 664 aa13.03□□□□□ -0.32
RNF40-211ENST00000567365 ZFYVE19Q96K21 471 aa13.03□□□□□ -0.32
RNF40-211ENST00000567365 CPXM1Q96SM3 734 aa13.03□□□□□ -0.32
RNF40-211ENST00000567365 PHOX2BQ99453 314 aa13.03□□□□□ -0.32
RNF40-211ENST00000567365 KLF16Q9BXK1 252 aaPredicted RBP13.03□□□□□ -0.32
RNF40-211ENST00000567365 EDEM3Q9BZQ6 932 aa13.03□□□□□ -0.32
RNF40-211ENST00000567365 BRD9Q9H8M2 597 aa13.03□□□□□ -0.32
RNF40-211ENST00000567365 HPS4Q9NQG7 708 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms