RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 SEMA4GQ9NTN9 838 aa21.33■■□□□ 1.01
CLN6-207ENST00000566347 SH3BP1Q9Y3L3 701 aa21.33■■□□□ 1.01
CLN6-207ENST00000566347 DNAH14Q0VDD8 3507 aa21.32■■□□□ 1
CLN6-207ENST00000566347 K7EQS6 105 aa21.32■■□□□ 1
CLN6-207ENST00000566347 AXIN1O15169 862 aa21.32■■□□□ 1
CLN6-207ENST00000566347 CILPO75339 1184 aa21.32■■□□□ 1
CLN6-207ENST00000566347 COBLL1Q53SF7 1204 aa21.32■■□□□ 1
CLN6-207ENST00000566347 RHBDF2Q6PJF5 856 aa21.32■■□□□ 1
CLN6-207ENST00000566347 CLEC20AQ6ZU45 233 aa21.32■■□□□ 1
CLN6-207ENST00000566347 USP33Q8TEY7 942 aa21.32■■□□□ 1
CLN6-207ENST00000566347 PNKPQ96T60 521 aa21.32■■□□□ 1
CLN6-207ENST00000566347 GTPBP4Q9BZE4 634 aaKnown RBP21.32■■□□□ 1
CLN6-207ENST00000566347 EBF1Q9UH73 591 aa21.32■■□□□ 1
CLN6-207ENST00000566347 PALM2-AKAP2B1ALY0 433 aaPredicted RBP21.31■■□□□ 1
CLN6-207ENST00000566347 SCAMP3O14828 347 aaKnown RBP21.31■■□□□ 1
CLN6-207ENST00000566347 TLR5O60602 858 aa21.31■■□□□ 1
CLN6-207ENST00000566347 SMC2O95347 1197 aa21.31■■□□□ 1
CLN6-207ENST00000566347 ADH5P11766 374 aa21.31■■□□□ 1
CLN6-207ENST00000566347 CD58P19256 250 aa21.31■■□□□ 1
CLN6-207ENST00000566347 MXI1P50539 228 aa21.31■■□□□ 1
CLN6-207ENST00000566347 ZNF658Q5TYW1 1059 aaPredicted RBP21.31■■□□□ 1
CLN6-207ENST00000566347 FBXL13Q8NEE6 735 aa21.31■■□□□ 1
CLN6-207ENST00000566347 TSG101Q99816 390 aa21.31■■□□□ 1
CLN6-207ENST00000566347 POLR3BQ9NW08 1133 aaPredicted RBP21.31■■□□□ 1
CLN6-207ENST00000566347 HOOK1Q9UJC3 728 aaKnown RBP21.31■■□□□ 1
CLN6-207ENST00000566347 SCML2Q9UQR0 700 aa21.31■■□□□ 1
CLN6-207ENST00000566347 PCDHA5Q9Y5H7 936 aa21.31■■□□□ 1
CLN6-207ENST00000566347 APODP05090 189 aa21.3■■□□□ 1
CLN6-207ENST00000566347 PRCPP42785 496 aa21.3■■□□□ 1
CLN6-207ENST00000566347 SEC13P55735 322 aa21.3■■□□□ 1
CLN6-207ENST00000566347 MRPS21P82921 87 aaKnown RBP21.3■■□□□ 1
CLN6-207ENST00000566347 GAD2Q05329 585 aa21.3■■□□□ 1
CLN6-207ENST00000566347 C2orf27AQ580R0 203 aa21.3■■□□□ 1
CLN6-207ENST00000566347 PRR23CQ6ZRP0 262 aa21.3■■□□□ 1
CLN6-207ENST00000566347 WHAMMQ8TF30 809 aa21.3■■□□□ 1
CLN6-207ENST00000566347 ZC3H10Q96K80 434 aaKnown RBP21.3■■□□□ 1
CLN6-207ENST00000566347 RTKNQ9BST9 563 aa21.3■■□□□ 1
CLN6-207ENST00000566347 FAM124BQ9H5Z6 455 aaPredicted RBP21.3■■□□□ 1
CLN6-207ENST00000566347 DYNC1LI1Q9Y6G9 523 aaKnown RBP21.3■■□□□ 1
CLN6-207ENST00000566347 EML5Q05BV3 1969 aa21.3■■□□□ 1
CLN6-207ENST00000566347 MYOFQ9NZM1 2061 aa21.3■■□□□ 1
CLN6-207ENST00000566347 HHLA1C9JL84 531 aa21.29■■□□□ 1
CLN6-207ENST00000566347 SLC16A3O15427 465 aaKnown RBP21.29■■□□□ 1
CLN6-207ENST00000566347 KAT7O95251 611 aa21.29■■□□□ 1
CLN6-207ENST00000566347 ACO1P21399 889 aaKnown RBP21.29■■□□□ 1
CLN6-207ENST00000566347 SLC6A11P48066 632 aa21.29■■□□□ 1
CLN6-207ENST00000566347 ATXN1P54253 815 aaKnown RBP21.29■■□□□ 1
CLN6-207ENST00000566347 GOLGA8FQ08AF8 430 aa21.29■■□□□ 1
CLN6-207ENST00000566347 GOLGA8DPQ0D2H9 430 aa21.29■■□□□ 1
CLN6-207ENST00000566347 HSF5Q4G112 596 aaPredicted RBP21.29■■□□□ 1
CLN6-207ENST00000566347 PREPLQ4J6C6 727 aaPredicted RBP21.29■■□□□ 1
CLN6-207ENST00000566347 LY6G5CQ5SRR4 150 aa21.29■■□□□ 1
CLN6-207ENST00000566347 BTBD8Q5XKL5 378 aa21.29■■□□□ 1
CLN6-207ENST00000566347 GPRIN1Q7Z2K8 1008 aa21.29■■□□□ 1
CLN6-207ENST00000566347 KBTBD6Q86V97 674 aa21.29■■□□□ 1
CLN6-207ENST00000566347 ENGASEQ8NFI3 743 aa21.29■■□□□ 1
CLN6-207ENST00000566347 TSTD1Q8NFU3 115 aa21.29■■□□□ 1
CLN6-207ENST00000566347 NETO1Q8TDF5 533 aa21.29■■□□□ 1
CLN6-207ENST00000566347 EEF2KMTQ96G04 330 aa21.29■■□□□ 1
CLN6-207ENST00000566347 CYLDQ9NQC7 956 aa21.29■■□□□ 1
CLN6-207ENST00000566347 RAB20Q9NX57 234 aa21.29■■□□□ 1
CLN6-207ENST00000566347 MMP17Q9ULZ9 603 aa21.29■■□□□ 1
CLN6-207ENST00000566347 SDK1Q7Z5N4 2213 aa21.29■■□□□ 1
CLN6-207ENST00000566347 A0A0A0MRY4 1105 aa21.28■■□□□ 1
CLN6-207ENST00000566347 CYP26A1O43174 497 aa21.28■■□□□ 1
CLN6-207ENST00000566347 EPN2O95208 641 aa21.28■■□□□ 1
CLN6-207ENST00000566347 ATP5C1P36542 298 aaKnown RBP21.28■■□□□ 1
CLN6-207ENST00000566347 GRIA2P42262 883 aa21.28■■□□□ 1
CLN6-207ENST00000566347 FKBP3Q00688 224 aaKnown RBP21.28■■□□□ 1
CLN6-207ENST00000566347 BBS7Q8IWZ6 715 aa21.28■■□□□ 1
CLN6-207ENST00000566347 SPATA20Q8TB22 786 aa21.28■■□□□ 1
CLN6-207ENST00000566347 SEMA4DQ92854 862 aa21.28■■□□□ 1
CLN6-207ENST00000566347 SMARCE1Q969G3 411 aa21.28■■□□□ 1
CLN6-207ENST00000566347 JAKMIP2Q96AA8 810 aa21.28■■□□□ 1
CLN6-207ENST00000566347 TIGD1Q96MW7 591 aa21.28■■□□□ 1
CLN6-207ENST00000566347 DUSP16Q9BY84 665 aa21.28■■□□□ 1
CLN6-207ENST00000566347 ARHGEF4Q9NR80 690 aa21.28■■□□□ 1
CLN6-207ENST00000566347 PCDHGA5Q9Y5G8 931 aa21.28■■□□□ 1
CLN6-207ENST00000566347 HOXC11O43248 304 aaPredicted RBP21.27■■□□□ 1
CLN6-207ENST00000566347 IRF1P10914 325 aa21.27■■□□□ 1
CLN6-207ENST00000566347 TNFRSF4P43489 277 aa21.27■■□□□ 1
CLN6-207ENST00000566347 PGFP49763 221 aa21.27■■□□□ 1
CLN6-207ENST00000566347 PSEN1P49768 467 aa21.27■■□□□ 1
CLN6-207ENST00000566347 DGKEP52429 567 aa21.27■■□□□ 1
CLN6-207ENST00000566347 LRRC63Q05C16 580 aa21.27■■□□□ 1
CLN6-207ENST00000566347 PPP1R26Q5T8A7 1209 aaPredicted RBP21.27■■□□□ 1
CLN6-207ENST00000566347 TCERG1LQ5VWI1 586 aa21.27■■□□□ 1
CLN6-207ENST00000566347 KLHDC10Q6PID8 442 aa21.27■■□□□ 1
CLN6-207ENST00000566347 HTR3DQ70Z44 454 aa21.27■■□□□ 1
CLN6-207ENST00000566347 TADA2BQ86TJ2 420 aa21.27■■□□□ 1
CLN6-207ENST00000566347 C12orf40Q86WS4 652 aa21.27■■□□□ 1
CLN6-207ENST00000566347 ZC3H3Q8IXZ2 948 aaKnown RBP21.27■■□□□ 1
CLN6-207ENST00000566347 HEXIM2Q96MH2 286 aaKnown RBP21.27■■□□□ 1
CLN6-207ENST00000566347 KLF16Q9BXK1 252 aaPredicted RBP21.27■■□□□ 1
CLN6-207ENST00000566347 ARRDC1-AS1Q9H2J1 176 aa21.27■■□□□ 1
CLN6-207ENST00000566347 SPHK2Q9NRA0 654 aa21.27■■□□□ 1
CLN6-207ENST00000566347 CISHQ9NSE2 258 aa21.27■■□□□ 1
CLN6-207ENST00000566347 LSM7Q9UK45 103 aaKnown RBP21.27■■□□□ 1
CLN6-207ENST00000566347 TBX18O95935 607 aa21.26■□□□□ 0.99
CLN6-207ENST00000566347 KIF11P52732 1056 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms