RNA–Protein interactions for RNA: ENST00000565803.1

CHD9-216, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 3,625 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-216ENST00000565803 B3GALT2O43825 422 aa3.23□□□□□ -1.89
CHD9-216ENST00000565803 AKR7A3O95154 331 aa3.23□□□□□ -1.89
CHD9-216ENST00000565803 LARGE1O95461 756 aa3.23□□□□□ -1.89
CHD9-216ENST00000565803 TPOP07202 933 aa3.23□□□□□ -1.89
CHD9-216ENST00000565803 EEF1GP26641 437 aaKnown RBP3.23□□□□□ -1.89
CHD9-216ENST00000565803 ABCD3P28288 659 aa3.23□□□□□ -1.89
CHD9-216ENST00000565803 S100A5P33763 92 aa3.23□□□□□ -1.89
CHD9-216ENST00000565803 GP5P40197 560 aa3.23□□□□□ -1.89
CHD9-216ENST00000565803 KCNC1P48547 511 aa3.23□□□□□ -1.89
CHD9-216ENST00000565803 SLC8A3P57103 927 aa3.23□□□□□ -1.89
CHD9-216ENST00000565803 CDK17Q00537 523 aa3.23□□□□□ -1.89
CHD9-216ENST00000565803 BFSP1Q12934 665 aa3.23□□□□□ -1.89
CHD9-216ENST00000565803 PDCLQ13371 301 aa3.23□□□□□ -1.89
CHD9-216ENST00000565803 FAM110CQ1W6H9 321 aa3.23□□□□□ -1.89
CHD9-216ENST00000565803 C2orf76Q3KRA6 126 aa3.23□□□□□ -1.89
CHD9-216ENST00000565803 PAN2Q504Q3 1202 aaKnown RBP3.23□□□□□ -1.89
CHD9-216ENST00000565803 ATAT1Q5SQI0 421 aa3.23□□□□□ -1.89
CHD9-216ENST00000565803 FAXCQ5TGI0 409 aa3.23□□□□□ -1.89
CHD9-216ENST00000565803 WDR93Q6P2C0 686 aa3.23□□□□□ -1.89
CHD9-216ENST00000565803 RAB11FIP2Q7L804 512 aa3.23□□□□□ -1.89
CHD9-216ENST00000565803 ADGRG6Q86SQ4 1221 aa3.23□□□□□ -1.89
CHD9-216ENST00000565803 DENND6AQ8IWF6 608 aa3.23□□□□□ -1.89
CHD9-216ENST00000565803 SLC7A5P1Q8MH63 180 aa3.23□□□□□ -1.89
CHD9-216ENST00000565803 RBBP8NLQ8NC74 664 aaPredicted RBP3.23□□□□□ -1.89
CHD9-216ENST00000565803 PIBF1Q8WXW3 757 aa3.23□□□□□ -1.89
CHD9-216ENST00000565803 RMDN1Q96DB5 314 aa3.23□□□□□ -1.89
CHD9-216ENST00000565803 ERO1AQ96HE7 468 aa3.23□□□□□ -1.89
CHD9-216ENST00000565803 PRICKLE1Q96MT3 831 aaPredicted RBP3.23□□□□□ -1.89
CHD9-216ENST00000565803 CDK5RAP1Q96SZ6 601 aaKnown RBP3.23□□□□□ -1.89
CHD9-216ENST00000565803 COQ7Q99807 217 aa3.23□□□□□ -1.89
CHD9-216ENST00000565803 LIN7BQ9HAP6 207 aa3.23□□□□□ -1.89
CHD9-216ENST00000565803 FAM114A2Q9NRY5 505 aa3.23□□□□□ -1.89
CHD9-216ENST00000565803 CCM2LQ9NUG4 571 aaPredicted RBP3.23□□□□□ -1.89
CHD9-216ENST00000565803 ZC3H7BQ9UGR2 993 aaKnown RBP3.23□□□□□ -1.89
CHD9-216ENST00000565803 FBXL21Q9UKT6 434 aa3.23□□□□□ -1.89
CHD9-216ENST00000565803 BARX2Q9UMQ3 279 aaPredicted RBP3.23□□□□□ -1.89
CHD9-216ENST00000565803 NAALAD2Q9Y3Q0 740 aa3.23□□□□□ -1.89
CHD9-216ENST00000565803 SNX9Q9Y5X1 595 aa3.23□□□□□ -1.89
CHD9-216ENST00000565803 GPC6Q9Y625 555 aaPredicted RBP3.23□□□□□ -1.89
CHD9-216ENST00000565803 SESN1Q9Y6P5 492 aa3.23□□□□□ -1.89
CHD9-216ENST00000565803 ZNF236Q9UL36 1845 aa3.22□□□□□ -1.89
CHD9-216ENST00000565803 SLC12A8A0AV02 714 aa3.22□□□□□ -1.89
CHD9-216ENST00000565803 SNAP23O00161 211 aa3.22□□□□□ -1.89
CHD9-216ENST00000565803 SMAD9O15198 467 aaKnown RBP3.22□□□□□ -1.89
CHD9-216ENST00000565803 NDUFS2O75306 463 aa3.22□□□□□ -1.89
CHD9-216ENST00000565803 PTP4A3O75365 173 aa3.22□□□□□ -1.89
CHD9-216ENST00000565803 ZNF189O75820 626 aaPredicted RBP3.22□□□□□ -1.89
CHD9-216ENST00000565803 DGAT1O75907 488 aa3.22□□□□□ -1.89
CHD9-216ENST00000565803 ENDOD1O94919 500 aa3.22□□□□□ -1.89
CHD9-216ENST00000565803 NPTXRO95502 500 aa3.22□□□□□ -1.89
CHD9-216ENST00000565803 PRAMEF12O95522 483 aa3.22□□□□□ -1.89
CHD9-216ENST00000565803 MPOP05164 745 aa3.22□□□□□ -1.89
CHD9-216ENST00000565803 EPB41P11171 864 aaKnown RBP3.22□□□□□ -1.89
CHD9-216ENST00000565803 PDE6AP16499 860 aa3.22□□□□□ -1.89
CHD9-216ENST00000565803 CTNNA2P26232 953 aa3.22□□□□□ -1.89
CHD9-216ENST00000565803 MC4RP32245 332 aa3.22□□□□□ -1.89
CHD9-216ENST00000565803 LUMP51884 338 aaPredicted RBP3.22□□□□□ -1.89
CHD9-216ENST00000565803 RWDD2BP57060 319 aa3.22□□□□□ -1.89
CHD9-216ENST00000565803 ACTR1AP61163 376 aa3.22□□□□□ -1.89
CHD9-216ENST00000565803 ERVK-21P61565 698 aa3.22□□□□□ -1.89
CHD9-216ENST00000565803 TFAP4Q01664 338 aa3.22□□□□□ -1.89
CHD9-216ENST00000565803 TFCP2Q12800 502 aa3.22□□□□□ -1.89
CHD9-216ENST00000565803 RIPK1Q13546 671 aa3.22□□□□□ -1.89
CHD9-216ENST00000565803 PDK1Q15118 436 aa3.22□□□□□ -1.89
CHD9-216ENST00000565803 SF1Q15637 639 aaKnown RBP3.22□□□□□ -1.89
CHD9-216ENST00000565803 CLPPQ16740 277 aaPredicted RBP3.22□□□□□ -1.89
CHD9-216ENST00000565803 PRSS53Q2L4Q9 553 aa3.22□□□□□ -1.89
CHD9-216ENST00000565803 CCDC14Q49A88 953 aa3.22□□□□□ -1.89
CHD9-216ENST00000565803 TMEM240Q5SV17 173 aa3.22□□□□□ -1.89
CHD9-216ENST00000565803 RASIP1Q5U651 963 aa3.22□□□□□ -1.89
CHD9-216ENST00000565803 SFMBT2Q5VUG0 894 aa3.22□□□□□ -1.89
CHD9-216ENST00000565803 TIGD7Q6NT04 549 aaPredicted RBP3.22□□□□□ -1.89
CHD9-216ENST00000565803 FAM111BQ6SJ93 734 aa3.22□□□□□ -1.89
CHD9-216ENST00000565803 VASH1Q7L8A9 365 aaPredicted RBP3.22□□□□□ -1.89
CHD9-216ENST00000565803 CDH26Q8IXH8 852 aa3.22□□□□□ -1.89
CHD9-216ENST00000565803 EFHBQ8N7U6 833 aa3.22□□□□□ -1.89
CHD9-216ENST00000565803 FBXO15Q8NCQ5 510 aaPredicted RBP3.22□□□□□ -1.89
CHD9-216ENST00000565803 CEP76Q8TAP6 659 aa3.22□□□□□ -1.89
CHD9-216ENST00000565803 RHPN1Q8TCX5 695 aa3.22□□□□□ -1.89
CHD9-216ENST00000565803 C3orf49Q96BT1 292 aa3.22□□□□□ -1.89
CHD9-216ENST00000565803 ZNF764Q96H86 408 aaPredicted RBP3.22□□□□□ -1.89
CHD9-216ENST00000565803 C7orf26Q96N11 449 aa3.22□□□□□ -1.89
CHD9-216ENST00000565803 TM9SF2Q99805 663 aa3.22□□□□□ -1.89
CHD9-216ENST00000565803 SH3GL2Q99962 352 aa3.22□□□□□ -1.89
CHD9-216ENST00000565803 FERMT1Q9BQL6 677 aa3.22□□□□□ -1.89
CHD9-216ENST00000565803 CDK19Q9BWU1 502 aa3.22□□□□□ -1.89
CHD9-216ENST00000565803 TDRD1Q9BXT4 1180 aaKnown RBP3.22□□□□□ -1.89
CHD9-216ENST00000565803 ACPTQ9BZG2 426 aa3.22□□□□□ -1.89
CHD9-216ENST00000565803 RNF32Q9H0A6 362 aa3.22□□□□□ -1.89
CHD9-216ENST00000565803 GBP3Q9H0R5 595 aa3.22□□□□□ -1.89
CHD9-216ENST00000565803 EPS8L2Q9H6S3 715 aa3.22□□□□□ -1.89
CHD9-216ENST00000565803 CHODLQ9H9P2 273 aa3.22□□□□□ -1.89
CHD9-216ENST00000565803 SARS2Q9NP81 518 aaKnown RBP3.22□□□□□ -1.89
CHD9-216ENST00000565803 SLC35C2Q9NQQ7 365 aa3.22□□□□□ -1.89
CHD9-216ENST00000565803 CATSPERZQ9NTU4 200 aa3.22□□□□□ -1.89
CHD9-216ENST00000565803 LMBRD1Q9NUN5 540 aa3.22□□□□□ -1.89
CHD9-216ENST00000565803 ABI2Q9NYB9 513 aaPredicted RBP3.22□□□□□ -1.89
CHD9-216ENST00000565803 INTS6Q9UL03 887 aaKnown RBP3.22□□□□□ -1.89
CHD9-216ENST00000565803 MAN2B2Q9Y2E5 1009 aa3.22□□□□□ -1.89
CHD9-216ENST00000565803 SAMM50Q9Y512 469 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms