RNA–Protein interactions for RNA: ENST00000564791.5

SNX29-204, Transcript of sorting nexin 29, humanhuman

TSL 1 (best)

Gene SNX29, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-204ENST00000564791 OTUD1Q5VV17 481 aaPredicted RBP11.77□□□□□ -0.53
SNX29-204ENST00000564791 PM20D1Q6GTS8 502 aa11.77□□□□□ -0.53
SNX29-204ENST00000564791 SLC8B1Q6J4K2 584 aa11.77□□□□□ -0.53
SNX29-204ENST00000564791 POLNQ7Z5Q5 900 aa11.77□□□□□ -0.53
SNX29-204ENST00000564791 ADAT2Q7Z6V5 191 aaKnown RBP11.77□□□□□ -0.53
SNX29-204ENST00000564791 SLC13A5Q86YT5 568 aaPredicted RBP11.77□□□□□ -0.53
SNX29-204ENST00000564791 SCML4Q8N228 414 aa11.77□□□□□ -0.53
SNX29-204ENST00000564791 MMGT1Q8N4V1 131 aa11.77□□□□□ -0.53
SNX29-204ENST00000564791 STKLD1Q8NE28 680 aa11.77□□□□□ -0.53
SNX29-204ENST00000564791 EXD1Q8NHP7 514 aa11.77□□□□□ -0.53
SNX29-204ENST00000564791 SPPL2BQ8TCT7 592 aa11.77□□□□□ -0.53
SNX29-204ENST00000564791 IRGQQ8WZA9 623 aa11.77□□□□□ -0.53
SNX29-204ENST00000564791 DPF3Q92784 378 aa11.77□□□□□ -0.53
SNX29-204ENST00000564791 C8orf48Q96LL4 319 aa11.77□□□□□ -0.53
SNX29-204ENST00000564791 TBCBQ99426 244 aa11.77□□□□□ -0.53
SNX29-204ENST00000564791 NAP1L3Q99457 506 aaPredicted RBP11.77□□□□□ -0.53
SNX29-204ENST00000564791 LBHD1Q9BQE6 289 aaPredicted RBP11.77□□□□□ -0.53
SNX29-204ENST00000564791 PLVAPQ9BX97 442 aa11.77□□□□□ -0.53
SNX29-204ENST00000564791 CRISPLD1Q9H336 500 aa11.77□□□□□ -0.53
SNX29-204ENST00000564791 POPDC2Q9HBU9 364 aa11.77□□□□□ -0.53
SNX29-204ENST00000564791 AAASQ9NRG9 546 aa11.77□□□□□ -0.53
SNX29-204ENST00000564791 DDX56Q9NY93 547 aaKnown RBP11.77□□□□□ -0.53
SNX29-204ENST00000564791 USP18Q9UMW8 372 aa11.77□□□□□ -0.53
SNX29-204ENST00000564791 PCDHB12Q9Y5F1 795 aa11.77□□□□□ -0.53
SNX29-204ENST00000564791 USP3Q9Y6I4 520 aa11.77□□□□□ -0.53
SNX29-204ENST00000564791 GBF1Q92538 1859 aa11.76□□□□□ -0.53
SNX29-204ENST00000564791 TCRBV7S2A1N4TA0A589 114 aa11.76□□□□□ -0.53
SNX29-204ENST00000564791 KRIT1O00522 736 aa11.76□□□□□ -0.53
SNX29-204ENST00000564791 TRUB2O95900 331 aaKnown RBP11.76□□□□□ -0.53
SNX29-204ENST00000564791 LTFP02788 710 aa11.76□□□□□ -0.53
SNX29-204ENST00000564791 FYNP06241 537 aa11.76□□□□□ -0.53
SNX29-204ENST00000564791 KRT7P08729 469 aa11.76□□□□□ -0.53
SNX29-204ENST00000564791 DESP17661 470 aa11.76□□□□□ -0.53
SNX29-204ENST00000564791 OR1D2P34982 312 aa11.76□□□□□ -0.53
SNX29-204ENST00000564791 SULT1E1P49888 294 aa11.76□□□□□ -0.53
SNX29-204ENST00000564791 HDAC4P56524 1084 aa11.76□□□□□ -0.53
SNX29-204ENST00000564791 PITX1P78337 314 aaPredicted RBP11.76□□□□□ -0.53
SNX29-204ENST00000564791 SMC1AQ14683 1233 aaKnown RBP11.76□□□□□ -0.53
SNX29-204ENST00000564791 LLGL1Q15334 1064 aa11.76□□□□□ -0.53
SNX29-204ENST00000564791 DCAF6Q58WW2 860 aa11.76□□□□□ -0.53
SNX29-204ENST00000564791 ZFYVE27Q5T4F4 411 aa11.76□□□□□ -0.53
SNX29-204ENST00000564791 SYPL2Q5VXT5 272 aa11.76□□□□□ -0.53
SNX29-204ENST00000564791 CYP4V2Q6ZWL3 525 aaPredicted RBP11.76□□□□□ -0.53
SNX29-204ENST00000564791 ANKS1BQ7Z6G8 1248 aa11.76□□□□□ -0.53
SNX29-204ENST00000564791 CCDC50Q8IVM0 306 aa11.76□□□□□ -0.53
SNX29-204ENST00000564791 SP7Q8TDD2 431 aaPredicted RBP11.76□□□□□ -0.53
SNX29-204ENST00000564791 C2orf15Q8WU43 125 aaKnown RBP11.76□□□□□ -0.53
SNX29-204ENST00000564791 RAPGEF5Q92565 580 aa11.76□□□□□ -0.53
SNX29-204ENST00000564791 CENPIQ92674 756 aaPredicted RBP11.76□□□□□ -0.53
SNX29-204ENST00000564791 CLP1Q92989 425 aaKnown RBP11.76□□□□□ -0.53
SNX29-204ENST00000564791 RNF25Q96BH1 459 aaPredicted RBP11.76□□□□□ -0.53
SNX29-204ENST00000564791 ABHD8Q96I13 439 aa11.76□□□□□ -0.53
SNX29-204ENST00000564791 RBM41Q96IZ5 413 aaKnown RBP11.76□□□□□ -0.53
SNX29-204ENST00000564791 SLITRK1Q96PX8 696 aa11.76□□□□□ -0.53
SNX29-204ENST00000564791 RAD9AQ99638 391 aa11.76□□□□□ -0.53
SNX29-204ENST00000564791 SEPT5Q99719 369 aaPredicted RBP11.76□□□□□ -0.53
SNX29-204ENST00000564791 CLSTN3Q9BQT9 956 aa11.76□□□□□ -0.53
SNX29-204ENST00000564791 HERPUD2Q9BSE4 406 aa11.76□□□□□ -0.53
SNX29-204ENST00000564791 EPC1Q9H2F5 836 aa11.76□□□□□ -0.53
SNX29-204ENST00000564791 NAALADL1Q9UQQ1 740 aa11.76□□□□□ -0.53
SNX29-204ENST00000564791 SLC27A5Q9Y2P5 690 aa11.76□□□□□ -0.53
SNX29-204ENST00000564791 NR2E1Q9Y466 385 aa11.76□□□□□ -0.53
SNX29-204ENST00000564791 LRRD1A4D1F6 860 aa11.75□□□□□ -0.53
SNX29-204ENST00000564791 LCHNA4D1U4 455 aa11.75□□□□□ -0.53
SNX29-204ENST00000564791 TLL1O43897 1013 aa11.75□□□□□ -0.53
SNX29-204ENST00000564791 PRPSAP2O60256 369 aa11.75□□□□□ -0.53
SNX29-204ENST00000564791 FGF18O76093 207 aa11.75□□□□□ -0.53
SNX29-204ENST00000564791 ZRANB2O95218 330 aaKnown RBP eCLIP11.75□□□□□ -0.53
SNX29-204ENST00000564791 URODP06132 367 aa11.75□□□□□ -0.53
SNX29-204ENST00000564791 RHOXF2BP0C7M4 288 aa11.75□□□□□ -0.53
SNX29-204ENST00000564791 HAPLN1P10915 354 aaPredicted RBP11.75□□□□□ -0.53
SNX29-204ENST00000564791 RALAP11233 206 aa11.75□□□□□ -0.53
SNX29-204ENST00000564791 NOS2P35228 1153 aa11.75□□□□□ -0.53
SNX29-204ENST00000564791 ATXN1P54253 815 aaKnown RBP11.75□□□□□ -0.53
SNX29-204ENST00000564791 DUSP4Q13115 394 aa11.75□□□□□ -0.53
SNX29-204ENST00000564791 CLUL1Q15846 466 aa11.75□□□□□ -0.53
SNX29-204ENST00000564791 SLC25A52Q3SY17 297 aa11.75□□□□□ -0.53
SNX29-204ENST00000564791 MGAT5BQ3V5L5 792 aa11.75□□□□□ -0.53
SNX29-204ENST00000564791 KCNT1Q5JUK3 1230 aa11.75□□□□□ -0.53
SNX29-204ENST00000564791 RASIP1Q5U651 963 aa11.75□□□□□ -0.53
SNX29-204ENST00000564791 SCYL2Q6P3W7 929 aa11.75□□□□□ -0.53
SNX29-204ENST00000564791 MFSD7Q6UXD7 560 aa11.75□□□□□ -0.53
SNX29-204ENST00000564791 SPOCD1Q6ZMY3 1216 aa11.75□□□□□ -0.53
SNX29-204ENST00000564791 RCOR2Q8IZ40 523 aa11.75□□□□□ -0.53
SNX29-204ENST00000564791 VPS52Q8N1B4 723 aa11.75□□□□□ -0.53
SNX29-204ENST00000564791 PHOSPHO2Q8TCD6 241 aa11.75□□□□□ -0.53
SNX29-204ENST00000564791 GPR152Q8TDT2 470 aa11.75□□□□□ -0.53
SNX29-204ENST00000564791 AUTS2Q8WXX7 1259 aa11.75□□□□□ -0.53
SNX29-204ENST00000564791 HSPH1Q92598 858 aa11.75□□□□□ -0.53
SNX29-204ENST00000564791 NPY6RQ99463 290 aa11.75□□□□□ -0.53
SNX29-204ENST00000564791 RHOXF2Q9BQY4 288 aa11.75□□□□□ -0.53
SNX29-204ENST00000564791 MTIF3Q9H2K0 278 aaKnown RBP11.75□□□□□ -0.53
SNX29-204ENST00000564791 CALCOCO1Q9P1Z2 691 aa11.75□□□□□ -0.53
SNX29-204ENST00000564791 GOLGA6L10A0A0M3HER8 536 aa11.75□□□□□ -0.53
SNX29-204ENST00000564791 C3orf70A6NLC5 250 aaPredicted RBP11.75□□□□□ -0.53
SNX29-204ENST00000564791 CAPN9O14815 690 aa11.75□□□□□ -0.53
SNX29-204ENST00000564791 FSCN2O14926 492 aa11.75□□□□□ -0.53
SNX29-204ENST00000564791 RARAP10276 462 aa11.75□□□□□ -0.53
SNX29-204ENST00000564791 DNAJB2P25686 324 aa11.75□□□□□ -0.53
SNX29-204ENST00000564791 TUBB4BP68371 445 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms