RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 DDX1Q92499 740 aaKnown RBP19.58■□□□□ 0.72
CLN6-204ENST00000564752 TAF4BQ92750 862 aa19.58■□□□□ 0.72
CLN6-204ENST00000564752 TIGD1Q96MW7 591 aa19.58■□□□□ 0.72
CLN6-204ENST00000564752 PNKPQ96T60 521 aa19.58■□□□□ 0.72
CLN6-204ENST00000564752 IMPG2Q9BZV3 1241 aa19.58■□□□□ 0.72
CLN6-204ENST00000564752 SMOC1Q9H4F8 434 aa19.58■□□□□ 0.72
CLN6-204ENST00000564752 VPS45Q9NRW7 570 aa19.58■□□□□ 0.72
CLN6-204ENST00000564752 CIZ1Q9ULV3 898 aaPredicted RBP19.58■□□□□ 0.72
CLN6-204ENST00000564752 MMP17Q9ULZ9 603 aa19.58■□□□□ 0.72
CLN6-204ENST00000564752 EPG5Q9HCE0 2579 aa19.58■□□□□ 0.72
CLN6-204ENST00000564752 ACACBO00763 2458 aa19.57■□□□□ 0.72
CLN6-204ENST00000564752 TM4SF5O14894 197 aa19.57■□□□□ 0.72
CLN6-204ENST00000564752 KAT7O95251 611 aa19.57■□□□□ 0.72
CLN6-204ENST00000564752 ADH1CP00326 375 aa19.57■□□□□ 0.72
CLN6-204ENST00000564752 TUBP50607 506 aa19.57■□□□□ 0.72
CLN6-204ENST00000564752 CRY1Q16526 586 aa19.57■□□□□ 0.72
CLN6-204ENST00000564752 USP39Q53GS9 565 aaKnown RBP19.57■□□□□ 0.72
CLN6-204ENST00000564752 C1orf220Q5T0J3 134 aa19.57■□□□□ 0.72
CLN6-204ENST00000564752 IL31Q6EBC2 164 aa19.57■□□□□ 0.72
CLN6-204ENST00000564752 CCDC33Q8N5R6 958 aa19.57■□□□□ 0.72
CLN6-204ENST00000564752 ZMIZ2Q8NF64 920 aa19.57■□□□□ 0.72
CLN6-204ENST00000564752 ERCC4Q92889 916 aaPredicted RBP19.57■□□□□ 0.72
CLN6-204ENST00000564752 OTUB2Q96DC9 234 aa19.57■□□□□ 0.72
CLN6-204ENST00000564752 SMOQ99835 787 aa19.57■□□□□ 0.72
CLN6-204ENST00000564752 CCSER2Q9H7U1 834 aa19.57■□□□□ 0.72
CLN6-204ENST00000564752 PCDHA5Q9Y5H7 936 aa19.57■□□□□ 0.72
CLN6-204ENST00000564752 SPAG17Q6Q759 2223 aa19.56■□□□□ 0.72
CLN6-204ENST00000564752 BEST1O76090 585 aa19.56■□□□□ 0.72
CLN6-204ENST00000564752 ASS1P00966 412 aaKnown RBP19.56■□□□□ 0.72
CLN6-204ENST00000564752 HLA-DRAP01903 254 aa19.56■□□□□ 0.72
CLN6-204ENST00000564752 CHRM1P11229 460 aaPredicted RBP19.56■□□□□ 0.72
CLN6-204ENST00000564752 ADH5P11766 374 aa19.56■□□□□ 0.72
CLN6-204ENST00000564752 PRCPP42785 496 aa19.56■□□□□ 0.72
CLN6-204ENST00000564752 GCLMP48507 274 aa19.56■□□□□ 0.72
CLN6-204ENST00000564752 NDST1P52848 882 aa19.56■□□□□ 0.72
CLN6-204ENST00000564752 ENPEPQ07075 957 aa19.56■□□□□ 0.72
CLN6-204ENST00000564752 LY6G5CQ5SRR4 150 aa19.56■□□□□ 0.72
CLN6-204ENST00000564752 UNC93AQ86WB7 457 aa19.56■□□□□ 0.72
CLN6-204ENST00000564752 C12orf40Q86WS4 652 aa19.56■□□□□ 0.72
CLN6-204ENST00000564752 SFTPA1Q8IWL2 248 aa19.56■□□□□ 0.72
CLN6-204ENST00000564752 SLC2A14Q8TDB8 520 aa19.56■□□□□ 0.72
CLN6-204ENST00000564752 CNOT6LQ96LI5 555 aaKnown RBP19.56■□□□□ 0.72
CLN6-204ENST00000564752 TSG101Q99816 390 aa19.56■□□□□ 0.72
CLN6-204ENST00000564752 DUSP9Q99956 384 aaKnown RBP19.56■□□□□ 0.72
CLN6-204ENST00000564752 GTPBP4Q9BZE4 634 aaKnown RBP19.56■□□□□ 0.72
CLN6-204ENST00000564752 TPSD1Q9BZJ3 242 aa19.56■□□□□ 0.72
CLN6-204ENST00000564752 MMRN2Q9H8L6 949 aa19.56■□□□□ 0.72
CLN6-204ENST00000564752 CSNK1G1Q9HCP0 422 aa19.56■□□□□ 0.72
CLN6-204ENST00000564752 KRT82Q9NSB4 513 aa19.56■□□□□ 0.72
CLN6-204ENST00000564752 GMIPQ9P107 970 aa19.56■□□□□ 0.72
CLN6-204ENST00000564752 INVSQ9Y283 1065 aa19.56■□□□□ 0.72
CLN6-204ENST00000564752 CNOT1A5YKK6 2376 aaKnown RBP19.56■□□□□ 0.72
CLN6-204ENST00000564752 LAMA1P25391 3075 aa19.55■□□□□ 0.72
CLN6-204ENST00000564752 BCLAF3A2AJT9 711 aaKnown RBP19.55■□□□□ 0.72
CLN6-204ENST00000564752 CETN3O15182 167 aa19.55■□□□□ 0.72
CLN6-204ENST00000564752 APODP05090 189 aa19.55■□□□□ 0.72
CLN6-204ENST00000564752 EPB41P11171 864 aaKnown RBP19.55■□□□□ 0.72
CLN6-204ENST00000564752 CCDC130P13994 396 aa19.55■□□□□ 0.72
CLN6-204ENST00000564752 GRIA2P42262 883 aa19.55■□□□□ 0.72
CLN6-204ENST00000564752 TNFRSF4P43489 277 aa19.55■□□□□ 0.72
CLN6-204ENST00000564752 ASPAP45381 313 aa19.55■□□□□ 0.72
CLN6-204ENST00000564752 GAD2Q05329 585 aa19.55■□□□□ 0.72
CLN6-204ENST00000564752 ORC1Q13415 861 aa19.55■□□□□ 0.72
CLN6-204ENST00000564752 HSF5Q4G112 596 aaPredicted RBP19.55■□□□□ 0.72
CLN6-204ENST00000564752 COBLL1Q53SF7 1204 aa19.55■□□□□ 0.72
CLN6-204ENST00000564752 STPG1Q5TH74 334 aa19.55■□□□□ 0.72
CLN6-204ENST00000564752 SPOPLQ6IQ16 392 aa19.55■□□□□ 0.72
CLN6-204ENST00000564752 ANO7Q6IWH7 933 aa19.55■□□□□ 0.72
CLN6-204ENST00000564752 TMEM92Q6UXU6 159 aa19.55■□□□□ 0.72
CLN6-204ENST00000564752 C11orf74Q86VG3 221 aa19.55■□□□□ 0.72
CLN6-204ENST00000564752 IL17RCQ8NAC3 791 aa19.55■□□□□ 0.72
CLN6-204ENST00000564752 SPATA20Q8TB22 786 aa19.55■□□□□ 0.72
CLN6-204ENST00000564752 EEF2KMTQ96G04 330 aa19.55■□□□□ 0.72
CLN6-204ENST00000564752 ARHGEF4Q9NR80 690 aa19.55■□□□□ 0.72
CLN6-204ENST00000564752 HMGXB4Q9UGU5 601 aa19.55■□□□□ 0.72
CLN6-204ENST00000564752 SH3BP1Q9Y3L3 701 aa19.55■□□□□ 0.72
CLN6-204ENST00000564752 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.54■□□□□ 0.72
CLN6-204ENST00000564752 CAVIN2O95810 425 aa19.54■□□□□ 0.72
CLN6-204ENST00000564752 HNRNPLP14866 589 aaKnown RBP eCLIP19.54■□□□□ 0.72
CLN6-204ENST00000564752 KCNA4P22459 653 aa19.54■□□□□ 0.72
CLN6-204ENST00000564752 GBP1P32455 592 aa19.54■□□□□ 0.72
CLN6-204ENST00000564752 TIE1P35590 1138 aa19.54■□□□□ 0.72
CLN6-204ENST00000564752 KIR2DL1P43626 348 aaPredicted RBP19.54■□□□□ 0.72
CLN6-204ENST00000564752 PGFP49763 221 aa19.54■□□□□ 0.72
CLN6-204ENST00000564752 MAP3K7CLP57077 242 aa19.54■□□□□ 0.72
CLN6-204ENST00000564752 CREB5Q02930 508 aa19.54■□□□□ 0.72
CLN6-204ENST00000564752 PPP3CAQ08209 521 aa19.54■□□□□ 0.72
CLN6-204ENST00000564752 EMC10Q5UCC4 262 aa19.54■□□□□ 0.72
CLN6-204ENST00000564752 PMS2CLQ68D20 193 aa19.54■□□□□ 0.72
CLN6-204ENST00000564752 PHTF2Q8N3S3 785 aa19.54■□□□□ 0.72
CLN6-204ENST00000564752 ALLCQ8N6M5 410 aa19.54■□□□□ 0.72
CLN6-204ENST00000564752 C12orf29Q8N999 325 aa19.54■□□□□ 0.72
CLN6-204ENST00000564752 TXNDC5Q8NBS9 432 aaKnown RBP19.54■□□□□ 0.72
CLN6-204ENST00000564752 CCDC150Q8NCX0 1101 aa19.54■□□□□ 0.72
CLN6-204ENST00000564752 MDGA1Q8NFP4 955 aa19.54■□□□□ 0.72
CLN6-204ENST00000564752 TAS1R2Q8TE23 839 aa19.54■□□□□ 0.72
CLN6-204ENST00000564752 FBXO44Q9H4M3 255 aa19.54■□□□□ 0.72
CLN6-204ENST00000564752 TMEM8AQ9HCN3 771 aa19.54■□□□□ 0.72
CLN6-204ENST00000564752 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.54■□□□□ 0.725e-7■■■■■ 90.8
CLN6-204ENST00000564752 HELZP42694 1942 aaKnown RBP19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms