RNA–Protein interactions for RNA: ENST00000564578.5

KARS-204, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 5

Gene KARS, Length 1,942 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-204ENST00000564578 PHF7Q9BWX1 381 aaPredicted RBP13.11□□□□□ -0.31
KARS-204ENST00000564578 SLC46A2Q9BY10 475 aa13.11□□□□□ -0.31
KARS-204ENST00000564578 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.11□□□□□ -0.31
KARS-204ENST00000564578 IMPACTQ9P2X3 320 aa13.11□□□□□ -0.31
KARS-204ENST00000564578 A0A087X0T9 212 aa13.1□□□□□ -0.31
KARS-204ENST00000564578 A0A1W2PQH9 124 aa13.1□□□□□ -0.31
KARS-204ENST00000564578 FGF19O95750 216 aa13.1□□□□□ -0.31
KARS-204ENST00000564578 FAM228BP0C875 321 aa13.1□□□□□ -0.31
KARS-204ENST00000564578 SP100P23497 879 aaPredicted RBP13.1□□□□□ -0.31
KARS-204ENST00000564578 PPP3CCP48454 512 aa13.1□□□□□ -0.31
KARS-204ENST00000564578 MRPS5P82675 430 aaKnown RBP13.1□□□□□ -0.31
KARS-204ENST00000564578 CDK17Q00537 523 aa13.1□□□□□ -0.31
KARS-204ENST00000564578 HFE2Q6ZVN8 426 aa13.1□□□□□ -0.31
KARS-204ENST00000564578 ERICH1Q86X53 443 aa13.1□□□□□ -0.31
KARS-204ENST00000564578 KHSRPQ92945 711 aaKnown RBP eCLIP13.1□□□□□ -0.31
KARS-204ENST00000564578 ASB2Q96Q27 587 aa13.1□□□□□ -0.31
KARS-204ENST00000564578 CYP2S1Q96SQ9 504 aa13.1□□□□□ -0.31
KARS-204ENST00000564578 RNF38Q9H0F5 515 aa13.1□□□□□ -0.31
KARS-204ENST00000564578 SEPT11Q9NVA2 429 aaKnown RBP13.1□□□□□ -0.31
KARS-204ENST00000564578 TRPM5Q9NZQ8 1165 aa13.1□□□□□ -0.31
KARS-204ENST00000564578 CDH7Q9ULB5 785 aa13.1□□□□□ -0.31
KARS-204ENST00000564578 ANAPC1Q9H1A4 1944 aa13.1□□□□□ -0.31
KARS-204ENST00000564578 OAS1P00973 400 aaKnown RBP13.09□□□□□ -0.31
KARS-204ENST00000564578 FYNP06241 537 aa13.09□□□□□ -0.31
KARS-204ENST00000564578 FECHP22830 423 aa13.09□□□□□ -0.31
KARS-204ENST00000564578 EIF4A3P38919 411 aaKnown RBP13.09□□□□□ -0.31
KARS-204ENST00000564578 MAPK8IP2Q13387 824 aaPredicted RBP13.09□□□□□ -0.31
KARS-204ENST00000564578 TAF5Q15542 800 aa13.09□□□□□ -0.31
KARS-204ENST00000564578 AAK1Q2M2I8 961 aa13.09□□□□□ -0.31
KARS-204ENST00000564578 ACAD10Q6JQN1 1059 aa13.09□□□□□ -0.31
KARS-204ENST00000564578 OLFML1Q6UWY5 402 aa13.09□□□□□ -0.31
KARS-204ENST00000564578 PHF13Q86YI8 300 aaPredicted RBP13.09□□□□□ -0.31
KARS-204ENST00000564578 PDZD8Q8NEN9 1154 aa13.09□□□□□ -0.31
KARS-204ENST00000564578 MCRS1Q96EZ8 462 aa13.09□□□□□ -0.31
KARS-204ENST00000564578 NOX5Q96PH1 765 aa13.09□□□□□ -0.31
KARS-204ENST00000564578 PANX2Q96RD6 677 aa13.09□□□□□ -0.31
KARS-204ENST00000564578 TLR8Q9NR97 1041 aaKnown RBP13.09□□□□□ -0.31
KARS-204ENST00000564578 NENFQ9UMX5 172 aa13.09□□□□□ -0.31
KARS-204ENST00000564578 USTQ9Y2C2 406 aa13.09□□□□□ -0.31
KARS-204ENST00000564578 OBSL1O75147 1896 aa13.09□□□□□ -0.31
KARS-204ENST00000564578 DENND4CQ5VZ89 1909 aa13.09□□□□□ -0.31
KARS-204ENST00000564578 SSU72P8A0A1W2PR75 194 aa13.09□□□□□ -0.31
KARS-204ENST00000564578 FBXO21O94952 628 aa13.09□□□□□ -0.31
KARS-204ENST00000564578 TBX18O95935 607 aa13.09□□□□□ -0.31
KARS-204ENST00000564578 ABL1P00519 1130 aa13.09□□□□□ -0.31
KARS-204ENST00000564578 GZMAP12544 262 aa13.09□□□□□ -0.31
KARS-204ENST00000564578 LAMP2P13473 410 aa13.09□□□□□ -0.31
KARS-204ENST00000564578 YWHAGP61981 247 aaKnown RBP eCLIP13.09□□□□□ -0.31
KARS-204ENST00000564578 ZXDBP98169 803 aa13.09□□□□□ -0.31
KARS-204ENST00000564578 TSR1Q2NL82 804 aaKnown RBP13.09□□□□□ -0.31
KARS-204ENST00000564578 GPR158Q5T848 1215 aa13.09□□□□□ -0.31
KARS-204ENST00000564578 BSPRYQ5W0U4 402 aa13.09□□□□□ -0.31
KARS-204ENST00000564578 MMS22LQ6ZRQ5 1243 aa13.09□□□□□ -0.31
KARS-204ENST00000564578 FAM183BPQ6ZVS7 135 aa13.09□□□□□ -0.31
KARS-204ENST00000564578 MON1BQ7L1V2 547 aa13.09□□□□□ -0.31
KARS-204ENST00000564578 XYLT1Q86Y38 959 aa13.09□□□□□ -0.31
KARS-204ENST00000564578 MAB21L3Q8N8X9 362 aa13.09□□□□□ -0.31
KARS-204ENST00000564578 IRGQQ8WZA9 623 aa13.09□□□□□ -0.31
KARS-204ENST00000564578 MRPS31Q92665 395 aaKnown RBP13.09□□□□□ -0.31
KARS-204ENST00000564578 C18orf8Q96DM3 657 aa13.09□□□□□ -0.31
KARS-204ENST00000564578 TASP1Q9H6P5 420 aa13.09□□□□□ -0.31
KARS-204ENST00000564578 CCSER2Q9H7U1 834 aa13.09□□□□□ -0.31
KARS-204ENST00000564578 NHEJ1Q9H9Q4 299 aaPredicted RBP13.09□□□□□ -0.31
KARS-204ENST00000564578 ZNHIT6Q9NWK9 470 aaKnown RBP13.09□□□□□ -0.31
KARS-204ENST00000564578 GDE1Q9NZC3 331 aa13.09□□□□□ -0.31
KARS-204ENST00000564578 TTC28Q96AY4 2481 aa13.09□□□□□ -0.31
KARS-204ENST00000564578 NCOR1O75376 2440 aa13.08□□□□□ -0.32
KARS-204ENST00000564578 TMCO5BA8MYB1 307 aa13.08□□□□□ -0.32
KARS-204ENST00000564578 C2CD4DB7Z1M9 353 aa13.08□□□□□ -0.32
KARS-204ENST00000564578 OLFM2O95897 454 aa13.08□□□□□ -0.32
KARS-204ENST00000564578 NSFP46459 744 aaKnown RBP13.08□□□□□ -0.32
KARS-204ENST00000564578 TMEM139Q8IV31 216 aa13.08□□□□□ -0.32
KARS-204ENST00000564578 ARL14EPQ8N8R7 260 aaPredicted RBP13.08□□□□□ -0.32
KARS-204ENST00000564578 ST13P5Q8NFI4 369 aaPredicted RBP13.08□□□□□ -0.32
KARS-204ENST00000564578 RPGRIP1Q96KN7 1286 aa13.08□□□□□ -0.32
KARS-204ENST00000564578 GCNAQ96QF7 691 aa13.08□□□□□ -0.32
KARS-204ENST00000564578 C11orf70Q9BRQ4 267 aa13.08□□□□□ -0.32
KARS-204ENST00000564578 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.08□□□□□ -0.32
KARS-204ENST00000564578 ISCUQ9H1K1 167 aa13.08□□□□□ -0.32
KARS-204ENST00000564578 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.08□□□□□ -0.32
KARS-204ENST00000564578 CLIC5Q9NZA1 410 aa13.08□□□□□ -0.32
KARS-204ENST00000564578 NAGPAQ9UK23 515 aa13.08□□□□□ -0.32
KARS-204ENST00000564578 NUDT5Q9UKK9 219 aa13.08□□□□□ -0.32
KARS-204ENST00000564578 COCHO43405 550 aa13.07□□□□□ -0.32
KARS-204ENST00000564578 TLR5O60602 858 aa13.07□□□□□ -0.32
KARS-204ENST00000564578 FTLP02792 175 aaPredicted RBP13.07□□□□□ -0.32
KARS-204ENST00000564578 GBP2P32456 591 aaPredicted RBP13.07□□□□□ -0.32
KARS-204ENST00000564578 PSEN1P49768 467 aa13.07□□□□□ -0.32
KARS-204ENST00000564578 TUBP50607 506 aa13.07□□□□□ -0.32
KARS-204ENST00000564578 GFPT1Q06210 699 aaPredicted RBP13.07□□□□□ -0.32
KARS-204ENST00000564578 SLC18A3Q16572 532 aa13.07□□□□□ -0.32
KARS-204ENST00000564578 FAM78AQ5JUQ0 283 aa13.07□□□□□ -0.32
KARS-204ENST00000564578 OTOP3Q7RTS5 596 aa13.07□□□□□ -0.32
KARS-204ENST00000564578 MCOLN2Q8IZK6 566 aa13.07□□□□□ -0.32
KARS-204ENST00000564578 CMTM8Q8IZV2 173 aa13.07□□□□□ -0.32
KARS-204ENST00000564578 ZNF276Q8N554 614 aa13.07□□□□□ -0.32
KARS-204ENST00000564578 ZSCAN18Q8TBC5 510 aaPredicted RBP13.07□□□□□ -0.32
KARS-204ENST00000564578 EDEM1Q92611 657 aa13.07□□□□□ -0.32
KARS-204ENST00000564578 ASB16Q96NS5 453 aa13.07□□□□□ -0.32
KARS-204ENST00000564578 SMG9Q9H0W8 520 aaKnown RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms