RNA–Protein interactions for RNA: ENST00000564403.6

TCF4-224, Transcript of transcription factor 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TCF4, Length 2,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-224ENST00000564403 ZNF554Q86TJ5 538 aa9.54□□□□□ -0.88
TCF4-224ENST00000564403 PPHLN1Q8NEY8 458 aaKnown RBP9.54□□□□□ -0.88
TCF4-224ENST00000564403 ZNF564Q8TBZ8 553 aaPredicted RBP9.54□□□□□ -0.88
TCF4-224ENST00000564403 SPOCK2Q92563 424 aa9.54□□□□□ -0.88
TCF4-224ENST00000564403 ATP6V1E2Q96A05 226 aa9.54□□□□□ -0.88
TCF4-224ENST00000564403 ACO2Q99798 780 aaKnown RBP9.54□□□□□ -0.88
TCF4-224ENST00000564403 FAM129AQ9BZQ8 928 aa9.54□□□□□ -0.88
TCF4-224ENST00000564403 SMARCAD1Q9H4L7 1026 aa9.54□□□□□ -0.88
TCF4-224ENST00000564403 MROH8Q9H579 483 aa9.54□□□□□ -0.88
TCF4-224ENST00000564403 STARD7Q9NQZ5 370 aa9.54□□□□□ -0.88
TCF4-224ENST00000564403 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.54□□□□□ -0.88
TCF4-224ENST00000564403 CNOT8Q9UFF9 292 aaKnown RBP9.54□□□□□ -0.88
TCF4-224ENST00000564403 MTRF1LQ9UGC7 380 aaKnown RBP9.54□□□□□ -0.88
TCF4-224ENST00000564403 GINS2Q9Y248 185 aa9.54□□□□□ -0.88
TCF4-224ENST00000564403 PCDHB4Q9Y5E5 795 aa9.54□□□□□ -0.88
TCF4-224ENST00000564403 DOCK3Q8IZD9 2030 aa9.53□□□□□ -0.88
TCF4-224ENST00000564403 GOLGA8MH3BSY2 632 aa9.53□□□□□ -0.88
TCF4-224ENST00000564403 EBAG9O00559 213 aa9.53□□□□□ -0.88
TCF4-224ENST00000564403 ADCY6O43306 1168 aa9.53□□□□□ -0.88
TCF4-224ENST00000564403 LGR5O75473 907 aa9.53□□□□□ -0.88
TCF4-224ENST00000564403 TOM1L1O75674 476 aa9.53□□□□□ -0.88
TCF4-224ENST00000564403 PYGMP11217 842 aa9.53□□□□□ -0.88
TCF4-224ENST00000564403 FGFR4P22455 802 aa9.53□□□□□ -0.88
TCF4-224ENST00000564403 VARSP26640 1264 aaKnown RBP9.53□□□□□ -0.88
TCF4-224ENST00000564403 ALDH3A1P30838 453 aa9.53□□□□□ -0.88
TCF4-224ENST00000564403 RAC1P63000 192 aa9.53□□□□□ -0.88
TCF4-224ENST00000564403 NOP14P78316 857 aaKnown RBP9.53□□□□□ -0.88
TCF4-224ENST00000564403 SKOR1P84550 965 aa9.53□□□□□ -0.88
TCF4-224ENST00000564403 TSPY1Q01534 308 aa9.53□□□□□ -0.88
TCF4-224ENST00000564403 GCNT1Q02742 428 aa9.53□□□□□ -0.88
TCF4-224ENST00000564403 ARHGAP1Q07960 439 aa9.53□□□□□ -0.88
TCF4-224ENST00000564403 TTLL4Q14679 1199 aa9.53□□□□□ -0.88
TCF4-224ENST00000564403 IER5Q5VY09 327 aa9.53□□□□□ -0.88
TCF4-224ENST00000564403 GRAMD4Q6IC98 578 aa9.53□□□□□ -0.88
TCF4-224ENST00000564403 SLFN12LQ6IEE8 588 aa9.53□□□□□ -0.88
TCF4-224ENST00000564403 SCARA5Q6ZMJ2 495 aa9.53□□□□□ -0.88
TCF4-224ENST00000564403 CEP128Q6ZU80 1094 aa9.53□□□□□ -0.88
TCF4-224ENST00000564403 USP37Q86T82 979 aa9.53□□□□□ -0.88
TCF4-224ENST00000564403 CAND1Q86VP6 1230 aaKnown RBP9.53□□□□□ -0.88
TCF4-224ENST00000564403 BBOF1Q8ND07 529 aa9.53□□□□□ -0.88
TCF4-224ENST00000564403 PPP1R14CQ8TAE6 165 aa9.53□□□□□ -0.88
TCF4-224ENST00000564403 SLC22A8Q8TCC7 542 aa9.53□□□□□ -0.88
TCF4-224ENST00000564403 LENG1Q96BZ8 264 aaPredicted RBP9.53□□□□□ -0.88
TCF4-224ENST00000564403 NRBF2Q96F24 287 aa9.53□□□□□ -0.88
TCF4-224ENST00000564403 TRIM51Q9BSJ1 452 aa9.53□□□□□ -0.88
TCF4-224ENST00000564403 CCDC113Q9H0I3 377 aa9.53□□□□□ -0.88
TCF4-224ENST00000564403 DPH5Q9H2P9 285 aa9.53□□□□□ -0.88
TCF4-224ENST00000564403 GDF3Q9NR23 364 aa9.53□□□□□ -0.88
TCF4-224ENST00000564403 TTC7AQ9ULT0 858 aaPredicted RBP9.53□□□□□ -0.88
TCF4-224ENST00000564403 A0A0G2JMZ2 1700 aa9.53□□□□□ -0.88
TCF4-224ENST00000564403 A0A087WZ62 844 aa9.53□□□□□ -0.88
TCF4-224ENST00000564403 H0YCG3 227 aa9.53□□□□□ -0.88
TCF4-224ENST00000564403 NCAM2O15394 837 aa9.53□□□□□ -0.88
TCF4-224ENST00000564403 DAPK3O43293 454 aa9.53□□□□□ -0.88
TCF4-224ENST00000564403 PIP5K1CO60331 668 aa9.53□□□□□ -0.88
TCF4-224ENST00000564403 SNAI1O95863 264 aaPredicted RBP9.53□□□□□ -0.88
TCF4-224ENST00000564403 PIGRP01833 764 aa9.53□□□□□ -0.88
TCF4-224ENST00000564403 KPNA1P52294 538 aaPredicted RBP9.53□□□□□ -0.88
TCF4-224ENST00000564403 ROR1Q01973 937 aa9.53□□□□□ -0.88
TCF4-224ENST00000564403 CUL2Q13617 745 aa9.53□□□□□ -0.88
TCF4-224ENST00000564403 HLTFQ14527 1009 aaKnown RBP eCLIP9.53□□□□□ -0.88
TCF4-224ENST00000564403 ACAD10Q6JQN1 1059 aa9.53□□□□□ -0.88
TCF4-224ENST00000564403 PLPPR4Q7Z2D5 763 aa9.53□□□□□ -0.88
TCF4-224ENST00000564403 RASGEF1CQ8N431 466 aa9.53□□□□□ -0.88
TCF4-224ENST00000564403 OR8H1Q8NGG4 311 aa9.53□□□□□ -0.88
TCF4-224ENST00000564403 CPB2Q96IY4 423 aa9.53□□□□□ -0.88
TCF4-224ENST00000564403 FDXACB1Q9BRP7 624 aaPredicted RBP9.53□□□□□ -0.88
TCF4-224ENST00000564403 C11orf70Q9BRQ4 267 aa9.53□□□□□ -0.88
TCF4-224ENST00000564403 TMEM134Q9H6X4 195 aa9.53□□□□□ -0.88
TCF4-224ENST00000564403 KIAA1586Q9HCI6 787 aa9.53□□□□□ -0.88
TCF4-224ENST00000564403 IGKV6-21A0A0C4DH24 114 aa9.52□□□□□ -0.88
TCF4-224ENST00000564403 TOR1BO14657 336 aa9.52□□□□□ -0.88
TCF4-224ENST00000564403 MEFVO15553 781 aaPredicted RBP9.52□□□□□ -0.88
TCF4-224ENST00000564403 RNF40O75150 1001 aa9.52□□□□□ -0.88
TCF4-224ENST00000564403 AGR2O95994 175 aa9.52□□□□□ -0.88
TCF4-224ENST00000564403 ALDH2P05091 517 aa9.52□□□□□ -0.88
TCF4-224ENST00000564403 LGALS2P05162 132 aa9.52□□□□□ -0.88
TCF4-224ENST00000564403 CXCL8P10145 99 aa9.52□□□□□ -0.88
TCF4-224ENST00000564403 UNGP13051 313 aaPredicted RBP9.52□□□□□ -0.88
TCF4-224ENST00000564403 GNL1P36915 607 aaPredicted RBP9.52□□□□□ -0.88
TCF4-224ENST00000564403 SMAD4Q13485 552 aaKnown RBP9.52□□□□□ -0.88
TCF4-224ENST00000564403 BLMHQ13867 455 aa9.52□□□□□ -0.88
TCF4-224ENST00000564403 PPP1R7Q15435 360 aa9.52□□□□□ -0.88
TCF4-224ENST00000564403 CLEC16AQ2KHT3 1053 aa9.52□□□□□ -0.88
TCF4-224ENST00000564403 HIBCHQ6NVY1 386 aaPredicted RBP9.52□□□□□ -0.88
TCF4-224ENST00000564403 RHOT2Q8IXI1 618 aa9.52□□□□□ -0.88
TCF4-224ENST00000564403 IFT20Q8IY31 132 aa9.52□□□□□ -0.88
TCF4-224ENST00000564403 PEX13Q92968 403 aa9.52□□□□□ -0.88
TCF4-224ENST00000564403 C18orf8Q96DM3 657 aa9.52□□□□□ -0.88
TCF4-224ENST00000564403 ZSWIM1Q9BR11 485 aa9.52□□□□□ -0.88
TCF4-224ENST00000564403 MRPL4Q9BYD3 311 aaKnown RBP9.52□□□□□ -0.88
TCF4-224ENST00000564403 CXCL16Q9H2A7 254 aa9.52□□□□□ -0.88
TCF4-224ENST00000564403 DDX18Q9NVP1 670 aaKnown RBP9.52□□□□□ -0.88
TCF4-224ENST00000564403 ATXN2Q99700 1313 aaKnown RBP9.52□□□□□ -0.89
TCF4-224ENST00000564403 LOC285556D6RIA3 1793 aa9.52□□□□□ -0.89
TCF4-224ENST00000564403 GPR25O00155 361 aa9.52□□□□□ -0.89
TCF4-224ENST00000564403 IGF2BP3O00425 579 aaKnown RBP eCLIP9.52□□□□□ -0.89
TCF4-224ENST00000564403 MCF2LO15068 1137 aa9.52□□□□□ -0.89
TCF4-224ENST00000564403 SPTLC1O15269 473 aa9.52□□□□□ -0.89
TCF4-224ENST00000564403 SPOPO43791 374 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms