RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 NFKBIEO00221 500 aa13.61□□□□□ -0.23
USB1-207ENST00000563149 APOL1O14791 398 aa13.61□□□□□ -0.23
USB1-207ENST00000563149 ITGBL1O95965 494 aaPredicted RBP13.61□□□□□ -0.23
USB1-207ENST00000563149 ITGB3P05106 788 aa13.61□□□□□ -0.23
USB1-207ENST00000563149 CXCL8P10145 99 aa13.61□□□□□ -0.23
USB1-207ENST00000563149 ESRRAP11474 423 aaPredicted RBP13.61□□□□□ -0.23
USB1-207ENST00000563149 PDGFRAP16234 1089 aa13.61□□□□□ -0.23
USB1-207ENST00000563149 BGNP21810 368 aa13.61□□□□□ -0.23
USB1-207ENST00000563149 OSBPP22059 807 aa13.61□□□□□ -0.23
USB1-207ENST00000563149 SERPINB3P29508 390 aa13.61□□□□□ -0.23
USB1-207ENST00000563149 OSTNP61366 133 aa13.61□□□□□ -0.23
USB1-207ENST00000563149 YWHAZP63104 245 aaKnown RBP13.61□□□□□ -0.23
USB1-207ENST00000563149 MBTD1Q05BQ5 628 aa13.61□□□□□ -0.23
USB1-207ENST00000563149 INCA1Q0VD86 236 aa13.61□□□□□ -0.23
USB1-207ENST00000563149 MMRN1Q13201 1228 aa13.61□□□□□ -0.23
USB1-207ENST00000563149 KRT81Q14533 505 aa13.61□□□□□ -0.23
USB1-207ENST00000563149 ZRSR2Q15696 482 aaKnown RBP13.61□□□□□ -0.23
USB1-207ENST00000563149 DBN1Q16643 649 aa13.61□□□□□ -0.23
USB1-207ENST00000563149 LY6KQ17RY6 165 aa13.61□□□□□ -0.23
USB1-207ENST00000563149 CELF3Q5SZQ8 465 aaKnown RBP13.61□□□□□ -0.23
USB1-207ENST00000563149 LCLAT1Q6UWP7 414 aa13.61□□□□□ -0.23
USB1-207ENST00000563149 NPNTQ6UXI9 565 aa13.61□□□□□ -0.23
USB1-207ENST00000563149 ZC3H18Q86VM9 953 aaKnown RBP13.61□□□□□ -0.23
USB1-207ENST00000563149 CEP120Q8N960 986 aa13.61□□□□□ -0.23
USB1-207ENST00000563149 CXorf38Q8TB03 319 aa13.61□□□□□ -0.23
USB1-207ENST00000563149 OXNAD1Q96HP4 312 aaPredicted RBP13.61□□□□□ -0.23
USB1-207ENST00000563149 HEXIM2Q96MH2 286 aaKnown RBP13.61□□□□□ -0.23
USB1-207ENST00000563149 TWNKQ96RR1 684 aa13.61□□□□□ -0.23
USB1-207ENST00000563149 SRPK1Q96SB4 655 aaKnown RBP13.61□□□□□ -0.23
USB1-207ENST00000563149 SMYD3Q9H7B4 428 aa13.61□□□□□ -0.23
USB1-207ENST00000563149 IFT122Q9HBG6 1241 aa13.61□□□□□ -0.23
USB1-207ENST00000563149 RAB6BQ9NRW1 208 aa13.61□□□□□ -0.23
USB1-207ENST00000563149 BTBD7Q9P203 1132 aa13.61□□□□□ -0.23
USB1-207ENST00000563149 PLLPQ9Y342 182 aa13.61□□□□□ -0.23
USB1-207ENST00000563149 NUMBLQ9Y6R0 609 aa13.61□□□□□ -0.23
USB1-207ENST00000563149 A8MXQ7 604 aa13.6□□□□□ -0.23
USB1-207ENST00000563149 TRIM49D1C9J1S8 452 aa13.6□□□□□ -0.23
USB1-207ENST00000563149 FZD9O00144 591 aa13.6□□□□□ -0.23
USB1-207ENST00000563149 NOP56O00567 594 aaKnown RBP13.6□□□□□ -0.23
USB1-207ENST00000563149 KRT38O76015 456 aa13.6□□□□□ -0.23
USB1-207ENST00000563149 VHLP40337 213 aa13.6□□□□□ -0.23
USB1-207ENST00000563149 PTDSS1P48651 473 aaKnown RBP13.6□□□□□ -0.23
USB1-207ENST00000563149 SERPINB9P50453 376 aa13.6□□□□□ -0.23
USB1-207ENST00000563149 MRPS35P82673 323 aaKnown RBP13.6□□□□□ -0.23
USB1-207ENST00000563149 SLC9A4Q6AI14 798 aa13.6□□□□□ -0.23
USB1-207ENST00000563149 OR6B2Q6IFH4 312 aa13.6□□□□□ -0.23
USB1-207ENST00000563149 CAPRIN2Q6IMN6 1127 aaKnown RBP13.6□□□□□ -0.23
USB1-207ENST00000563149 NT5DC4Q86YG4 428 aa13.6□□□□□ -0.23
USB1-207ENST00000563149 IFNLR1Q8IU57 520 aaPredicted RBP13.6□□□□□ -0.23
USB1-207ENST00000563149 VPS52Q8N1B4 723 aa13.6□□□□□ -0.23
USB1-207ENST00000563149 TAB3Q8N5C8 712 aaPredicted RBP13.6□□□□□ -0.23
USB1-207ENST00000563149 PLD5Q8N7P1 536 aa13.6□□□□□ -0.23
USB1-207ENST00000563149 TTC8Q8TAM2 541 aa13.6□□□□□ -0.23
USB1-207ENST00000563149 MCUR1Q96AQ8 359 aa13.6□□□□□ -0.23
USB1-207ENST00000563149 SPATC1LQ9H0A9 340 aa13.6□□□□□ -0.23
USB1-207ENST00000563149 C12orf65Q9H3J6 166 aaKnown RBP13.6□□□□□ -0.23
USB1-207ENST00000563149 SMARCAD1Q9H4L7 1026 aa13.6□□□□□ -0.23
USB1-207ENST00000563149 GBA2Q9HCG7 927 aaPredicted RBP13.6□□□□□ -0.23
USB1-207ENST00000563149 ETNK2Q9NVF9 386 aa13.6□□□□□ -0.23
USB1-207ENST00000563149 ZC3H7BQ9UGR2 993 aaKnown RBP13.6□□□□□ -0.23
USB1-207ENST00000563149 LTBP3Q9NS15 1303 aa13.6□□□□□ -0.23
USB1-207ENST00000563149 GPR25O00155 361 aa13.6□□□□□ -0.23
USB1-207ENST00000563149 KCNN4O15554 427 aa13.6□□□□□ -0.23
USB1-207ENST00000563149 B4GALT5O43286 388 aa13.6□□□□□ -0.23
USB1-207ENST00000563149 ENTPD5O75356 428 aa13.6□□□□□ -0.23
USB1-207ENST00000563149 PIAS1O75925 651 aa13.6□□□□□ -0.23
USB1-207ENST00000563149 ZBED1O96006 694 aa13.6□□□□□ -0.23
USB1-207ENST00000563149 NFICP08651 508 aa13.6□□□□□ -0.23
USB1-207ENST00000563149 STAG3L1P0CL83 205 aa13.6□□□□□ -0.23
USB1-207ENST00000563149 SETSIPP0DME0 302 aa13.6□□□□□ -0.23
USB1-207ENST00000563149 MYL2P10916 166 aa13.6□□□□□ -0.23
USB1-207ENST00000563149 HIRAP54198 1017 aaPredicted RBP13.6□□□□□ -0.23
USB1-207ENST00000563149 BCAR1P56945 870 aa13.6□□□□□ -0.23
USB1-207ENST00000563149 SNX16P57768 344 aa13.6□□□□□ -0.23
USB1-207ENST00000563149 TBCCQ15814 346 aa13.6□□□□□ -0.23
USB1-207ENST00000563149 JADE1Q6IE81 842 aa13.6□□□□□ -0.23
USB1-207ENST00000563149 EFCAB12Q6NXP0 572 aa13.6□□□□□ -0.23
USB1-207ENST00000563149 CYS1Q717R9 158 aa13.6□□□□□ -0.23
USB1-207ENST00000563149 CDKL3Q8IVW4 592 aaPredicted RBP13.6□□□□□ -0.23
USB1-207ENST00000563149 KIRREL3Q8IZU9 778 aa13.6□□□□□ -0.23
USB1-207ENST00000563149 PPM1NQ8N819 430 aa13.6□□□□□ -0.23
USB1-207ENST00000563149 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.6□□□□□ -0.23
USB1-207ENST00000563149 DNAJC9Q8WXX5 260 aa13.6□□□□□ -0.23
USB1-207ENST00000563149 E2F7Q96AV8 911 aa13.6□□□□□ -0.23
USB1-207ENST00000563149 NLRP4Q96MN2 994 aa13.6□□□□□ -0.23
USB1-207ENST00000563149 ZNF670Q9BS34 389 aa13.6□□□□□ -0.23
USB1-207ENST00000563149 POPDC2Q9HBU9 364 aa13.6□□□□□ -0.23
USB1-207ENST00000563149 ALG13Q9NP73 1137 aaKnown RBP13.6□□□□□ -0.23
USB1-207ENST00000563149 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.6□□□□□ -0.23
USB1-207ENST00000563149 TAS2R1Q9NYW7 299 aa13.6□□□□□ -0.23
USB1-207ENST00000563149 ITGA11Q9UKX5 1188 aa13.6□□□□□ -0.23
USB1-207ENST00000563149 GJA3Q9Y6H8 435 aa13.6□□□□□ -0.23
USB1-207ENST00000563149 FCHO1O14526 889 aa13.59□□□□□ -0.23
USB1-207ENST00000563149 MDM4O15151 490 aa13.59□□□□□ -0.23
USB1-207ENST00000563149 BIRC5O15392 142 aa13.59□□□□□ -0.23
USB1-207ENST00000563149 MAGEC1O60732 1142 aa13.59□□□□□ -0.23
USB1-207ENST00000563149 SLC25A27O95847 323 aa13.59□□□□□ -0.23
USB1-207ENST00000563149 APOEP02649 317 aa13.59□□□□□ -0.23
USB1-207ENST00000563149 RARBP10826 455 aa13.59□□□□□ -0.23
USB1-207ENST00000563149 ZFXP17010 805 aaPredicted RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms