RNA–Protein interactions for RNA: ENST00000562956.1

LINC00838-201, long intergenic non-protein coding RNA 838, humanhuman

TSL 1 (best) BASIC

Gene LINC00838, Length 2,936 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00838-201ENST00000562956 LMNB2Q03252 620 aa9.83□□□□□ -0.84
LINC00838-201ENST00000562956 CA9Q16790 459 aa9.83□□□□□ -0.84
LINC00838-201ENST00000562956 KCTD16Q68DU8 428 aa9.83□□□□□ -0.84
LINC00838-201ENST00000562956 MICALL1Q8N3F8 863 aa9.83□□□□□ -0.84
LINC00838-201ENST00000562956 CCDC89Q8N998 374 aa9.83□□□□□ -0.84
LINC00838-201ENST00000562956 ZNF784Q8NCA9 323 aaPredicted RBP9.83□□□□□ -0.84
LINC00838-201ENST00000562956 KCNK16Q96T55 309 aa9.83□□□□□ -0.84
LINC00838-201ENST00000562956 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.83□□□□□ -0.84
LINC00838-201ENST00000562956 SEMA4AQ9H3S1 761 aa9.83□□□□□ -0.84
LINC00838-201ENST00000562956 GOLGA6AQ9NYA3 693 aa9.83□□□□□ -0.84
LINC00838-201ENST00000562956 DRG1Q9Y295 367 aaKnown RBP9.83□□□□□ -0.84
LINC00838-201ENST00000562956 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.83□□□□□ -0.84
LINC00838-201ENST00000562956 ITGAVP06756 1048 aa9.83□□□□□ -0.84
LINC00838-201ENST00000562956 ODC1P11926 461 aa9.83□□□□□ -0.84
LINC00838-201ENST00000562956 PECAM1P16284 738 aaPredicted RBP9.83□□□□□ -0.84
LINC00838-201ENST00000562956 IL4RP24394 825 aa9.83□□□□□ -0.84
LINC00838-201ENST00000562956 YY1P25490 414 aa9.83□□□□□ -0.84
LINC00838-201ENST00000562956 CHKAP35790 457 aa9.83□□□□□ -0.84
LINC00838-201ENST00000562956 MAGEA9P43362 315 aa9.83□□□□□ -0.84
LINC00838-201ENST00000562956 BOLA3Q53S33 107 aa9.83□□□□□ -0.84
LINC00838-201ENST00000562956 CLLU1OSQ5K130 101 aa9.83□□□□□ -0.84
LINC00838-201ENST00000562956 SLC24A5Q71RS6 500 aa9.83□□□□□ -0.84
LINC00838-201ENST00000562956 ARCQ7LC44 396 aa9.83□□□□□ -0.84
LINC00838-201ENST00000562956 FAM35AQ86V20 835 aa9.83□□□□□ -0.84
LINC00838-201ENST00000562956 CCDC25Q86WR0 208 aa9.83□□□□□ -0.84
LINC00838-201ENST00000562956 SH2D3CQ8N5H7 860 aa9.83□□□□□ -0.84
LINC00838-201ENST00000562956 KCTD13Q8WZ19 329 aa9.83□□□□□ -0.84
LINC00838-201ENST00000562956 CENPIQ92674 756 aaPredicted RBP9.83□□□□□ -0.84
LINC00838-201ENST00000562956 PWWP2AQ96N64 755 aa9.83□□□□□ -0.84
LINC00838-201ENST00000562956 SMOQ99835 787 aa9.83□□□□□ -0.84
LINC00838-201ENST00000562956 DDX23Q9BUQ8 820 aaKnown RBP9.83□□□□□ -0.84
LINC00838-201ENST00000562956 SNRNP25Q9BV90 132 aaKnown RBP9.83□□□□□ -0.84
LINC00838-201ENST00000562956 RHOBTB2Q9BYZ6 727 aa9.83□□□□□ -0.84
LINC00838-201ENST00000562956 FAM129AQ9BZQ8 928 aa9.83□□□□□ -0.84
LINC00838-201ENST00000562956 UNC93B1Q9H1C4 597 aa9.83□□□□□ -0.84
LINC00838-201ENST00000562956 PABPC3Q9H361 631 aaKnown RBP9.83□□□□□ -0.84
LINC00838-201ENST00000562956 ANAPC5Q9UJX4 755 aa9.83□□□□□ -0.84
LINC00838-201ENST00000562956 CDH9Q9ULB4 789 aa9.83□□□□□ -0.84
LINC00838-201ENST00000562956 KBTBD13C9JR72 458 aa9.82□□□□□ -0.84
LINC00838-201ENST00000562956 INPPL1O15357 1258 aa9.82□□□□□ -0.84
LINC00838-201ENST00000562956 AP1G2O75843 785 aa9.82□□□□□ -0.84
LINC00838-201ENST00000562956 SHBGP04278 402 aa9.82□□□□□ -0.84
LINC00838-201ENST00000562956 MRPS5P82675 430 aaKnown RBP9.82□□□□□ -0.84
LINC00838-201ENST00000562956 ARHGEF6Q15052 776 aa9.82□□□□□ -0.84
LINC00838-201ENST00000562956 P3H1Q32P28 736 aa9.82□□□□□ -0.84
LINC00838-201ENST00000562956 SPDYCQ5MJ68 293 aa9.82□□□□□ -0.84
LINC00838-201ENST00000562956 NPNTQ6UXI9 565 aa9.82□□□□□ -0.84
LINC00838-201ENST00000562956 GPRIN1Q7Z2K8 1008 aa9.82□□□□□ -0.84
LINC00838-201ENST00000562956 ZNF280BQ86YH2 543 aa9.82□□□□□ -0.84
LINC00838-201ENST00000562956 ZMIZ2Q8NF64 920 aa9.82□□□□□ -0.84
LINC00838-201ENST00000562956 MYCBPAPQ8TBZ2 947 aa9.82□□□□□ -0.84
LINC00838-201ENST00000562956 RSPH1Q8WYR4 309 aa9.82□□□□□ -0.84
LINC00838-201ENST00000562956 FAM149B1Q96BN6 582 aa9.82□□□□□ -0.84
LINC00838-201ENST00000562956 TBCBQ99426 244 aa9.82□□□□□ -0.84
LINC00838-201ENST00000562956 NCAPGQ9BPX3 1015 aa9.82□□□□□ -0.84
LINC00838-201ENST00000562956 MAGEB5Q9BZ81 275 aa9.82□□□□□ -0.84
LINC00838-201ENST00000562956 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.82□□□□□ -0.84
LINC00838-201ENST00000562956 APOC4-APOC2K7ER74 178 aa9.82□□□□□ -0.84
LINC00838-201ENST00000562956 M0QZQ0 153 aa9.82□□□□□ -0.84
LINC00838-201ENST00000562956 SGK1O00141 431 aa9.82□□□□□ -0.84
LINC00838-201ENST00000562956 DDHD2O94830 711 aa9.82□□□□□ -0.84
LINC00838-201ENST00000562956 APOC2P02655 101 aa9.82□□□□□ -0.84
LINC00838-201ENST00000562956 MATKP42679 507 aa9.82□□□□□ -0.84
LINC00838-201ENST00000562956 CDK7P50613 346 aa9.82□□□□□ -0.84
LINC00838-201ENST00000562956 TKTL1P51854 596 aa9.82□□□□□ -0.84
LINC00838-201ENST00000562956 GDF10P55107 478 aa9.82□□□□□ -0.84
LINC00838-201ENST00000562956 PRMT2P55345 433 aa9.82□□□□□ -0.84
LINC00838-201ENST00000562956 KRT81Q14533 505 aa9.82□□□□□ -0.84
LINC00838-201ENST00000562956 EFHC1Q5JVL4 640 aa9.82□□□□□ -0.84
LINC00838-201ENST00000562956 IZUMO3Q5VZ72 239 aa9.82□□□□□ -0.84
LINC00838-201ENST00000562956 LRRC8DQ7L1W4 858 aa9.82□□□□□ -0.84
LINC00838-201ENST00000562956 DEFB106AQ8N104 65 aa9.82□□□□□ -0.84
LINC00838-201ENST00000562956 TEKT4Q8WW24 435 aa9.82□□□□□ -0.84
LINC00838-201ENST00000562956 MAK16Q9BXY0 300 aaKnown RBP9.82□□□□□ -0.84
LINC00838-201ENST00000562956 ADAM7Q9H2U9 754 aa9.82□□□□□ -0.84
LINC00838-201ENST00000562956 YY1AP1Q9H869 796 aa9.82□□□□□ -0.84
LINC00838-201ENST00000562956 LRRC4Q9HBW1 653 aa9.82□□□□□ -0.84
LINC00838-201ENST00000562956 PCDH18Q9HCL0 1135 aa9.82□□□□□ -0.84
LINC00838-201ENST00000562956 DNAJC17Q9NVM6 304 aaKnown RBP9.82□□□□□ -0.84
LINC00838-201ENST00000562956 NBNO60934 754 aa9.81□□□□□ -0.84
LINC00838-201ENST00000562956 EOMESO95936 686 aa9.81□□□□□ -0.84
LINC00838-201ENST00000562956 CYP11A1P05108 521 aa9.81□□□□□ -0.84
LINC00838-201ENST00000562956 IVLP07476 585 aa9.81□□□□□ -0.84
LINC00838-201ENST00000562956 RARGP13631 454 aa9.81□□□□□ -0.84
LINC00838-201ENST00000562956 DESP17661 470 aa9.81□□□□□ -0.84
LINC00838-201ENST00000562956 PCSK1P29120 753 aa9.81□□□□□ -0.84
LINC00838-201ENST00000562956 YWHAZP63104 245 aaKnown RBP9.81□□□□□ -0.84
LINC00838-201ENST00000562956 PITX1P78337 314 aaPredicted RBP9.81□□□□□ -0.84
LINC00838-201ENST00000562956 FAM189BP81408 668 aa9.81□□□□□ -0.84
LINC00838-201ENST00000562956 SLC29A2Q14542 456 aa9.81□□□□□ -0.84
LINC00838-201ENST00000562956 GPNMBQ14956 572 aa9.81□□□□□ -0.84
LINC00838-201ENST00000562956 SLMAPQ14BN4 828 aa9.81□□□□□ -0.84
LINC00838-201ENST00000562956 PDK2Q15119 407 aa9.81□□□□□ -0.84
LINC00838-201ENST00000562956 GLB1LQ6UWU2 654 aa9.81□□□□□ -0.84
LINC00838-201ENST00000562956 HFE2Q6ZVN8 426 aa9.81□□□□□ -0.84
LINC00838-201ENST00000562956 B4GALNT4Q76KP1 1039 aa9.81□□□□□ -0.84
LINC00838-201ENST00000562956 SIX6OS1Q8N1H7 587 aa9.81□□□□□ -0.84
LINC00838-201ENST00000562956 TTC13Q8NBP0 860 aa9.81□□□□□ -0.84
LINC00838-201ENST00000562956 UROC1Q96N76 676 aa9.81□□□□□ -0.84
LINC00838-201ENST00000562956 RNF157Q96PX1 679 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms