RNA–Protein interactions for RNA: ENST00000562656.1

AC009055.1-201, humanhuman

TSL 3 BASIC

Gene AC009055.1, Length 781 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009055.1-201ENST00000562656 GTF3C3Q9Y5Q9 886 aa13.86□□□□□ -0.19
AC009055.1-201ENST00000562656 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.86□□□□□ -0.19
AC009055.1-201ENST00000562656 MED19A0JLT2 244 aaPredicted RBP13.85□□□□□ -0.19
AC009055.1-201ENST00000562656 SLC30A4O14863 429 aa13.85□□□□□ -0.19
AC009055.1-201ENST00000562656 STX10O60499 249 aa13.85□□□□□ -0.19
AC009055.1-201ENST00000562656 CILPO75339 1184 aa13.85□□□□□ -0.19
AC009055.1-201ENST00000562656 TRIM49P0CI25 452 aa13.85□□□□□ -0.19
AC009055.1-201ENST00000562656 TRIM49CP0CI26 452 aa13.85□□□□□ -0.19
AC009055.1-201ENST00000562656 ADH5P11766 374 aa13.85□□□□□ -0.19
AC009055.1-201ENST00000562656 MAP3K7CLP57077 242 aa13.85□□□□□ -0.19
AC009055.1-201ENST00000562656 GAD2Q05329 585 aa13.85□□□□□ -0.19
AC009055.1-201ENST00000562656 KLHDC10Q6PID8 442 aa13.85□□□□□ -0.19
AC009055.1-201ENST00000562656 CLEC20AQ6ZU45 233 aa13.85□□□□□ -0.19
AC009055.1-201ENST00000562656 ZNF276Q8N554 614 aa13.85□□□□□ -0.19
AC009055.1-201ENST00000562656 GSDMAQ96QA5 445 aa13.85□□□□□ -0.19
AC009055.1-201ENST00000562656 HHIPQ96QV1 700 aa13.85□□□□□ -0.19
AC009055.1-201ENST00000562656 GTPBP4Q9BZE4 634 aaKnown RBP13.85□□□□□ -0.19
AC009055.1-201ENST00000562656 NACA2Q9H009 215 aa13.85□□□□□ -0.19
AC009055.1-201ENST00000562656 CCSER2Q9H7U1 834 aa13.85□□□□□ -0.19
AC009055.1-201ENST00000562656 APOBEC3GQ9HC16 384 aaKnown RBP13.85□□□□□ -0.19
AC009055.1-201ENST00000562656 CYLDQ9NQC7 956 aa13.85□□□□□ -0.19
AC009055.1-201ENST00000562656 MMP17Q9ULZ9 603 aa13.85□□□□□ -0.19
AC009055.1-201ENST00000562656 SCML2Q9UQR0 700 aa13.85□□□□□ -0.19
AC009055.1-201ENST00000562656 SH3BP1Q9Y3L3 701 aa13.85□□□□□ -0.19
AC009055.1-201ENST00000562656 HHLA1C9JL84 531 aa13.84□□□□□ -0.19
AC009055.1-201ENST00000562656 CETN3O15182 167 aa13.84□□□□□ -0.19
AC009055.1-201ENST00000562656 HOXC11O43248 304 aaPredicted RBP13.84□□□□□ -0.19
AC009055.1-201ENST00000562656 TLR5O60602 858 aa13.84□□□□□ -0.19
AC009055.1-201ENST00000562656 KAT7O95251 611 aa13.84□□□□□ -0.19
AC009055.1-201ENST00000562656 APODP05090 189 aa13.84□□□□□ -0.19
AC009055.1-201ENST00000562656 ZNF806P0C7X5 589 aa13.84□□□□□ -0.19
AC009055.1-201ENST00000562656 GRIA2P42262 883 aa13.84□□□□□ -0.19
AC009055.1-201ENST00000562656 TNFRSF4P43489 277 aa13.84□□□□□ -0.19
AC009055.1-201ENST00000562656 DGKEP52429 567 aa13.84□□□□□ -0.19
AC009055.1-201ENST00000562656 ORC1Q13415 861 aa13.84□□□□□ -0.19
AC009055.1-201ENST00000562656 C2orf27AQ580R0 203 aa13.84□□□□□ -0.19
AC009055.1-201ENST00000562656 BTBD8Q5XKL5 378 aa13.84□□□□□ -0.19
AC009055.1-201ENST00000562656 HTR3DQ70Z44 454 aa13.84□□□□□ -0.19
AC009055.1-201ENST00000562656 KBTBD6Q86V97 674 aa13.84□□□□□ -0.19
AC009055.1-201ENST00000562656 RASSF3Q86WH2 238 aa13.84□□□□□ -0.19
AC009055.1-201ENST00000562656 FMR1NBQ8N0W7 255 aaPredicted RBP13.84□□□□□ -0.19
AC009055.1-201ENST00000562656 TSTD1Q8NFU3 115 aa13.84□□□□□ -0.19
AC009055.1-201ENST00000562656 KCNV2Q8TDN2 545 aa13.84□□□□□ -0.19
AC009055.1-201ENST00000562656 TWNKQ96RR1 684 aa13.84□□□□□ -0.19
AC009055.1-201ENST00000562656 FAM49BQ9NUQ9 324 aa13.84□□□□□ -0.19
AC009055.1-201ENST00000562656 POLR3BQ9NW08 1133 aaPredicted RBP13.84□□□□□ -0.19
AC009055.1-201ENST00000562656 MYOFQ9NZM1 2061 aa13.83□□□□□ -0.2
AC009055.1-201ENST00000562656 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.83□□□□□ -0.2
AC009055.1-201ENST00000562656 RHOBTB1O94844 696 aa13.83□□□□□ -0.2
AC009055.1-201ENST00000562656 EPB41P11171 864 aaKnown RBP13.83□□□□□ -0.2
AC009055.1-201ENST00000562656 ADORA2BP29275 332 aa13.83□□□□□ -0.2
AC009055.1-201ENST00000562656 ATP5C1P36542 298 aaKnown RBP13.83□□□□□ -0.2
AC009055.1-201ENST00000562656 SLC6A11P48066 632 aa13.83□□□□□ -0.2
AC009055.1-201ENST00000562656 PSEN1P49768 467 aa13.83□□□□□ -0.2
AC009055.1-201ENST00000562656 LIMK1P53667 647 aa13.83□□□□□ -0.2
AC009055.1-201ENST00000562656 NUCB2P80303 420 aa13.83□□□□□ -0.2
AC009055.1-201ENST00000562656 GOLGA8FQ08AF8 430 aa13.83□□□□□ -0.2
AC009055.1-201ENST00000562656 GOLGA8DPQ0D2H9 430 aa13.83□□□□□ -0.2
AC009055.1-201ENST00000562656 BECN1Q14457 450 aa13.83□□□□□ -0.2
AC009055.1-201ENST00000562656 ELF2Q15723 593 aa13.83□□□□□ -0.2
AC009055.1-201ENST00000562656 CRY1Q16526 586 aa13.83□□□□□ -0.2
AC009055.1-201ENST00000562656 PLK5Q496M5 336 aa13.83□□□□□ -0.2
AC009055.1-201ENST00000562656 USP39Q53GS9 565 aaKnown RBP13.83□□□□□ -0.2
AC009055.1-201ENST00000562656 PLA2G2CQ5R387 149 aa13.83□□□□□ -0.2
AC009055.1-201ENST00000562656 LY6G5CQ5SRR4 150 aa13.83□□□□□ -0.2
AC009055.1-201ENST00000562656 ZNF658Q5TYW1 1059 aaPredicted RBP13.83□□□□□ -0.2
AC009055.1-201ENST00000562656 NUDT18Q6ZVK8 323 aa13.83□□□□□ -0.2
AC009055.1-201ENST00000562656 ETFBKMTQ8IXQ9 262 aa13.83□□□□□ -0.2
AC009055.1-201ENST00000562656 FBXL13Q8NEE6 735 aa13.83□□□□□ -0.2
AC009055.1-201ENST00000562656 WHAMMQ8TF30 809 aa13.83□□□□□ -0.2
AC009055.1-201ENST00000562656 CNOT6LQ96LI5 555 aaKnown RBP13.83□□□□□ -0.2
AC009055.1-201ENST00000562656 ARRDC1-AS1Q9H2J1 176 aa13.83□□□□□ -0.2
AC009055.1-201ENST00000562656 GDPD2Q9HCC8 539 aa13.83□□□□□ -0.2
AC009055.1-201ENST00000562656 ARHGEF4Q9NR80 690 aa13.83□□□□□ -0.2
AC009055.1-201ENST00000562656 SPHK2Q9NRA0 654 aa13.83□□□□□ -0.2
AC009055.1-201ENST00000562656 RAB20Q9NX57 234 aa13.83□□□□□ -0.2
AC009055.1-201ENST00000562656 GOLGA6L4A6NEF3 574 aa13.82□□□□□ -0.2
AC009055.1-201ENST00000562656 SLC16A3O15427 465 aaKnown RBP13.82□□□□□ -0.2
AC009055.1-201ENST00000562656 ALDH1A2O94788 518 aa13.82□□□□□ -0.2
AC009055.1-201ENST00000562656 CHRM1P11229 460 aaPredicted RBP13.82□□□□□ -0.2
AC009055.1-201ENST00000562656 ACO1P21399 889 aaKnown RBP13.82□□□□□ -0.2
AC009055.1-201ENST00000562656 KIR2DL1P43626 348 aaPredicted RBP13.82□□□□□ -0.2
AC009055.1-201ENST00000562656 MXI1P50539 228 aa13.82□□□□□ -0.2
AC009055.1-201ENST00000562656 KIF11P52732 1056 aa13.82□□□□□ -0.2
AC009055.1-201ENST00000562656 SEC13P55735 322 aa13.82□□□□□ -0.2
AC009055.1-201ENST00000562656 PNOCQ13519 176 aa13.82□□□□□ -0.2
AC009055.1-201ENST00000562656 EOGTQ5NDL2 527 aa13.82□□□□□ -0.2
AC009055.1-201ENST00000562656 CCDC186Q7Z3E2 898 aa13.82□□□□□ -0.2
AC009055.1-201ENST00000562656 TADA2BQ86TJ2 420 aa13.82□□□□□ -0.2
AC009055.1-201ENST00000562656 C12orf40Q86WS4 652 aa13.82□□□□□ -0.2
AC009055.1-201ENST00000562656 BBS7Q8IWZ6 715 aa13.82□□□□□ -0.2
AC009055.1-201ENST00000562656 ZC3H3Q8IXZ2 948 aaKnown RBP13.82□□□□□ -0.2
AC009055.1-201ENST00000562656 PHTF2Q8N3S3 785 aa13.82□□□□□ -0.2
AC009055.1-201ENST00000562656 C12orf50Q8NA57 414 aaPredicted RBP13.82□□□□□ -0.2
AC009055.1-201ENST00000562656 IL17RCQ8NAC3 791 aa13.82□□□□□ -0.2
AC009055.1-201ENST00000562656 ENGASEQ8NFI3 743 aa13.82□□□□□ -0.2
AC009055.1-201ENST00000562656 SPATA20Q8TB22 786 aa13.82□□□□□ -0.2
AC009055.1-201ENST00000562656 DDX1Q92499 740 aaKnown RBP13.82□□□□□ -0.2
AC009055.1-201ENST00000562656 TIGD1Q96MW7 591 aa13.82□□□□□ -0.2
AC009055.1-201ENST00000562656 CDK5RAP1Q96SZ6 601 aaKnown RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms