RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 MAPK6Q16659 721 aa14.54□□□□□ -0.08
RABGGTA-220ENST00000560998 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.54□□□□□ -0.08
RABGGTA-220ENST00000560998 CFAP157Q5JU67 520 aa14.54□□□□□ -0.08
RABGGTA-220ENST00000560998 SPATA31D4Q6ZUB0 917 aa14.54□□□□□ -0.08
RABGGTA-220ENST00000560998 FASTKD5Q7L8L6 764 aaKnown RBP14.54□□□□□ -0.08
RABGGTA-220ENST00000560998 TMPRSS6Q8IU80 811 aa14.54□□□□□ -0.08
RABGGTA-220ENST00000560998 ZCCHC9Q8N567 271 aaKnown RBP14.54□□□□□ -0.08
RABGGTA-220ENST00000560998 RSPH1Q8WYR4 309 aa14.54□□□□□ -0.08
RABGGTA-220ENST00000560998 C11orf70Q9BRQ4 267 aa14.54□□□□□ -0.08
RABGGTA-220ENST00000560998 RHBDL2Q9NX52 303 aa14.54□□□□□ -0.08
RABGGTA-220ENST00000560998 KANSL3Q9P2N6 904 aa14.54□□□□□ -0.08
RABGGTA-220ENST00000560998 HEY2Q9UBP5 337 aa14.54□□□□□ -0.08
RABGGTA-220ENST00000560998 PAIP2BQ9ULR5 123 aaKnown RBP14.54□□□□□ -0.08
RABGGTA-220ENST00000560998 TM9SF1O15321 606 aa14.54□□□□□ -0.08
RABGGTA-220ENST00000560998 RNASEH1O60930 286 aaKnown RBP14.54□□□□□ -0.08
RABGGTA-220ENST00000560998 PROSCO94903 275 aa14.54□□□□□ -0.08
RABGGTA-220ENST00000560998 KRT15P19012 456 aa14.54□□□□□ -0.08
RABGGTA-220ENST00000560998 SSTR3P32745 418 aaPredicted RBP14.54□□□□□ -0.08
RABGGTA-220ENST00000560998 RPA3P35244 121 aaPredicted RBP14.54□□□□□ -0.08
RABGGTA-220ENST00000560998 ADCY8P40145 1251 aa14.54□□□□□ -0.08
RABGGTA-220ENST00000560998 SERPINB8P50452 374 aa14.54□□□□□ -0.08
RABGGTA-220ENST00000560998 ADRM1Q16186 407 aa14.54□□□□□ -0.08
RABGGTA-220ENST00000560998 DNAL1Q4LDG9 190 aa14.54□□□□□ -0.08
RABGGTA-220ENST00000560998 HSP90AA5PQ58FG0 334 aa14.54□□□□□ -0.08
RABGGTA-220ENST00000560998 ANKS1BQ7Z6G8 1248 aa14.54□□□□□ -0.08
RABGGTA-220ENST00000560998 PDSS2Q86YH6 399 aa14.54□□□□□ -0.08
RABGGTA-220ENST00000560998 OR6Y1Q8NGX8 325 aa14.54□□□□□ -0.08
RABGGTA-220ENST00000560998 COPS5Q92905 334 aa14.54□□□□□ -0.08
RABGGTA-220ENST00000560998 IMPG2Q9BZV3 1241 aa14.54□□□□□ -0.08
RABGGTA-220ENST00000560998 FHDC1Q9C0D6 1143 aaPredicted RBP14.54□□□□□ -0.08
RABGGTA-220ENST00000560998 MTMR12Q9C0I1 747 aa14.54□□□□□ -0.08
RABGGTA-220ENST00000560998 VPS11Q9H270 941 aa14.54□□□□□ -0.08
RABGGTA-220ENST00000560998 MROH8Q9H579 483 aa14.54□□□□□ -0.08
RABGGTA-220ENST00000560998 PCDH18Q9HCL0 1135 aa14.54□□□□□ -0.08
RABGGTA-220ENST00000560998 CPSF3Q9UKF6 684 aaKnown RBP14.54□□□□□ -0.08
RABGGTA-220ENST00000560998 ITGB1BP2Q9UKP3 347 aa14.54□□□□□ -0.08
RABGGTA-220ENST00000560998 SH3GLB1Q9Y371 365 aa14.54□□□□□ -0.08
RABGGTA-220ENST00000560998 NDC80O14777 642 aa14.53□□□□□ -0.08
RABGGTA-220ENST00000560998 BIRC5O15392 142 aa14.53□□□□□ -0.08
RABGGTA-220ENST00000560998 PROZP22891 400 aa14.53□□□□□ -0.08
RABGGTA-220ENST00000560998 GCAP28676 217 aa14.53□□□□□ -0.08
RABGGTA-220ENST00000560998 MAGEA4P43358 317 aa14.53□□□□□ -0.08
RABGGTA-220ENST00000560998 SLC26A2P50443 739 aa14.53□□□□□ -0.08
RABGGTA-220ENST00000560998 MYL6P60660 151 aa14.53□□□□□ -0.08
RABGGTA-220ENST00000560998 ZBTB16Q05516 673 aa14.53□□□□□ -0.08
RABGGTA-220ENST00000560998 C1QBPQ07021 282 aaKnown RBP14.53□□□□□ -0.08
RABGGTA-220ENST00000560998 MAMLD1Q13495 774 aa14.53□□□□□ -0.08
RABGGTA-220ENST00000560998 SURF1Q15526 300 aa14.53□□□□□ -0.08
RABGGTA-220ENST00000560998 SLC1A5Q15758 541 aa14.53□□□□□ -0.08
RABGGTA-220ENST00000560998 PLEKHG4Q58EX7 1191 aa14.53□□□□□ -0.08
RABGGTA-220ENST00000560998 PPP1R2P3Q6NXS1 205 aa14.53□□□□□ -0.08
RABGGTA-220ENST00000560998 LVRNQ6Q4G3 990 aa14.53□□□□□ -0.08
RABGGTA-220ENST00000560998 TSHZ1Q6ZSZ6 1077 aa14.53□□□□□ -0.08
RABGGTA-220ENST00000560998 LRRC6Q86X45 466 aa14.53□□□□□ -0.08
RABGGTA-220ENST00000560998 DIS3LQ8TF46 1054 aaKnown RBP14.53□□□□□ -0.08
RABGGTA-220ENST00000560998 TRAPPC12Q8WVT3 735 aa14.53□□□□□ -0.08
RABGGTA-220ENST00000560998 SLX1AQ9BQ83 275 aa14.53□□□□□ -0.08
RABGGTA-220ENST00000560998 SMARCAD1Q9H4L7 1026 aa14.53□□□□□ -0.08
RABGGTA-220ENST00000560998 FETUBQ9UGM5 382 aa14.53□□□□□ -0.08
RABGGTA-220ENST00000560998 POLIQ9UNA4 740 aa14.53□□□□□ -0.08
RABGGTA-220ENST00000560998 CHMP2BQ9UQN3 213 aa14.53□□□□□ -0.08
RABGGTA-220ENST00000560998 ANK1P16157 1881 aa14.53□□□□□ -0.08
RABGGTA-220ENST00000560998 A6NJR5 290 aa14.53□□□□□ -0.08
RABGGTA-220ENST00000560998 CSDE1O75534 798 aaKnown RBP14.53□□□□□ -0.08
RABGGTA-220ENST00000560998 TXNP10599 105 aaKnown RBP14.53□□□□□ -0.08
RABGGTA-220ENST00000560998 UQCRBP14927 111 aa14.53□□□□□ -0.08
RABGGTA-220ENST00000560998 AMPD1P23109 780 aa14.53□□□□□ -0.08
RABGGTA-220ENST00000560998 PHEXP78562 749 aa14.53□□□□□ -0.08
RABGGTA-220ENST00000560998 CBX3Q13185 183 aa14.53□□□□□ -0.08
RABGGTA-220ENST00000560998 DUOXA2Q1HG44 320 aa14.53□□□□□ -0.08
RABGGTA-220ENST00000560998 WDR78Q5VTH9 848 aa14.53□□□□□ -0.08
RABGGTA-220ENST00000560998 PLEKHA7Q6IQ23 1121 aa14.53□□□□□ -0.08
RABGGTA-220ENST00000560998 KYAT3Q6YP21 454 aaKnown RBP14.53□□□□□ -0.08
RABGGTA-220ENST00000560998 RHPN2Q8IUC4 686 aa14.53□□□□□ -0.08
RABGGTA-220ENST00000560998 SMYD1Q8NB12 490 aa14.53□□□□□ -0.08
RABGGTA-220ENST00000560998 C1orf54Q8WWF1 131 aa14.53□□□□□ -0.08
RABGGTA-220ENST00000560998 ALKBH8Q96BT7 664 aaKnown RBP14.53□□□□□ -0.08
RABGGTA-220ENST00000560998 FAM161BQ96MY7 647 aa14.53□□□□□ -0.08
RABGGTA-220ENST00000560998 DCLK3Q9C098 648 aa14.53□□□□□ -0.08
RABGGTA-220ENST00000560998 MRPL47Q9HD33 250 aaKnown RBP14.53□□□□□ -0.08
RABGGTA-220ENST00000560998 PTPRHQ9HD43 1115 aa14.53□□□□□ -0.08
RABGGTA-220ENST00000560998 ACKR2O00590 384 aa14.52□□□□□ -0.09
RABGGTA-220ENST00000560998 BUD23O43709 281 aaKnown RBP14.52□□□□□ -0.09
RABGGTA-220ENST00000560998 HBP1O60381 514 aa14.52□□□□□ -0.09
RABGGTA-220ENST00000560998 TM7SF2O76062 418 aa14.52□□□□□ -0.09
RABGGTA-220ENST00000560998 ATP5BP06576 529 aaKnown RBP14.52□□□□□ -0.09
RABGGTA-220ENST00000560998 HOXC6P09630 235 aa14.52□□□□□ -0.09
RABGGTA-220ENST00000560998 ZFXP17010 805 aaPredicted RBP14.52□□□□□ -0.09
RABGGTA-220ENST00000560998 TFDP1Q14186 410 aa14.52□□□□□ -0.09
RABGGTA-220ENST00000560998 SEPT7Q16181 437 aaKnown RBP14.52□□□□□ -0.09
RABGGTA-220ENST00000560998 C9orf131Q5VYM1 1079 aa14.52□□□□□ -0.09
RABGGTA-220ENST00000560998 IZUMO3Q5VZ72 239 aa14.52□□□□□ -0.09
RABGGTA-220ENST00000560998 MPZL3Q6UWV2 235 aa14.52□□□□□ -0.09
RABGGTA-220ENST00000560998 USP50Q70EL3 339 aaPredicted RBP14.52□□□□□ -0.09
RABGGTA-220ENST00000560998 SCUBE1Q8IWY4 988 aa14.52□□□□□ -0.09
RABGGTA-220ENST00000560998 RFWD2Q8NHY2 731 aa14.52□□□□□ -0.09
RABGGTA-220ENST00000560998 ZNF606Q8WXB4 792 aa14.52□□□□□ -0.09
RABGGTA-220ENST00000560998 NIF3L1Q9GZT8 377 aa14.52□□□□□ -0.09
RABGGTA-220ENST00000560998 FZD8Q9H461 694 aa14.52□□□□□ -0.09
RABGGTA-220ENST00000560998 SPON1Q9HCB6 807 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms