RNA–Protein interactions for RNA: ENST00000560514.1

TSPAN3-208, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 638 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-208ENST00000560514 NDUFV2P19404 249 aa18.95■□□□□ 0.62
TSPAN3-208ENST00000560514 YWHAQP27348 245 aa18.95■□□□□ 0.62
TSPAN3-208ENST00000560514 KCNA1Q09470 495 aa18.95■□□□□ 0.62
TSPAN3-208ENST00000560514 GRIK2Q13002 908 aa18.95■□□□□ 0.62
TSPAN3-208ENST00000560514 GRAMD4Q6IC98 578 aa18.95■□□□□ 0.62
TSPAN3-208ENST00000560514 ETFBKMTQ8IXQ9 262 aa18.95■□□□□ 0.62
TSPAN3-208ENST00000560514 ZSWIM2Q8NEG5 633 aa18.95■□□□□ 0.62
TSPAN3-208ENST00000560514 SCFD1Q8WVM8 642 aa18.95■□□□□ 0.62
TSPAN3-208ENST00000560514 KBTBD7Q8WVZ9 684 aa18.95■□□□□ 0.62
TSPAN3-208ENST00000560514 ERLEC1Q96DZ1 483 aa18.95■□□□□ 0.62
TSPAN3-208ENST00000560514 FAM84AQ96KN4 292 aa18.95■□□□□ 0.62
TSPAN3-208ENST00000560514 NACA2Q9H009 215 aa18.95■□□□□ 0.62
TSPAN3-208ENST00000560514 SPHK2Q9NRA0 654 aa18.95■□□□□ 0.62
TSPAN3-208ENST00000560514 PCDHB13Q9Y5F0 798 aa18.95■□□□□ 0.62
TSPAN3-208ENST00000560514 GCN1Q92616 2671 aaKnown RBP18.95■□□□□ 0.62
TSPAN3-208ENST00000560514 PTPRBP23467 1997 aa18.94■□□□□ 0.62
TSPAN3-208ENST00000560514 A0A1W2PQF6 199 aa18.94■□□□□ 0.62
TSPAN3-208ENST00000560514 MEI4A8MW99 385 aa18.94■□□□□ 0.62
TSPAN3-208ENST00000560514 BMP15O95972 392 aa18.94■□□□□ 0.62
TSPAN3-208ENST00000560514 GNL1P36915 607 aaPredicted RBP18.94■□□□□ 0.62
TSPAN3-208ENST00000560514 C8orf34Q49A92 452 aa18.94■□□□□ 0.62
TSPAN3-208ENST00000560514 HECTD3Q5T447 861 aa18.94■□□□□ 0.62
TSPAN3-208ENST00000560514 SCARA3Q6AZY7 606 aa18.94■□□□□ 0.62
TSPAN3-208ENST00000560514 KIAA1324Q6UXG2 1013 aaKnown RBP18.94■□□□□ 0.62
TSPAN3-208ENST00000560514 GLRX5Q86SX6 157 aa18.94■□□□□ 0.62
TSPAN3-208ENST00000560514 NUP93Q8N1F7 819 aa18.94■□□□□ 0.62
TSPAN3-208ENST00000560514 OR6B3Q8NGW1 331 aa18.94■□□□□ 0.62
TSPAN3-208ENST00000560514 FBXO32Q969P5 355 aa18.94■□□□□ 0.62
TSPAN3-208ENST00000560514 XPO6Q96QU8 1125 aaKnown RBP18.94■□□□□ 0.62
TSPAN3-208ENST00000560514 ELOVL4Q9GZR5 314 aa18.94■□□□□ 0.62
TSPAN3-208ENST00000560514 PCIF1Q9H4Z3 704 aa18.94■□□□□ 0.62
TSPAN3-208ENST00000560514 INTS13Q9NVM9 706 aa18.94■□□□□ 0.62
TSPAN3-208ENST00000560514 STARD13Q9Y3M8 1113 aa18.94■□□□□ 0.62
TSPAN3-208ENST00000560514 URB1O60287 2271 aaKnown RBP18.94■□□□□ 0.62
TSPAN3-208ENST00000560514 APC2O95996 2303 aa18.94■□□□□ 0.62
TSPAN3-208ENST00000560514 PRPF6O94906 941 aaKnown RBP18.93■□□□□ 0.62
TSPAN3-208ENST00000560514 RTN3O95197 1032 aaPredicted RBP18.93■□□□□ 0.62
TSPAN3-208ENST00000560514 SURF1Q15526 300 aa18.93■□□□□ 0.62
TSPAN3-208ENST00000560514 DUOXA2Q1HG44 320 aa18.93■□□□□ 0.62
TSPAN3-208ENST00000560514 EGFLAMQ63HQ2 1017 aa18.93■□□□□ 0.62
TSPAN3-208ENST00000560514 BBS7Q8IWZ6 715 aa18.93■□□□□ 0.62
TSPAN3-208ENST00000560514 GPD1LQ8N335 351 aa18.93■□□□□ 0.62
TSPAN3-208ENST00000560514 GLIS3Q8NEA6 775 aa18.93■□□□□ 0.62
TSPAN3-208ENST00000560514 OVCA2Q8WZ82 227 aa18.93■□□□□ 0.62
TSPAN3-208ENST00000560514 DNAJC17Q9NVM6 304 aaKnown RBP18.93■□□□□ 0.62
TSPAN3-208ENST00000560514 KIAA1522Q9P206 1035 aaPredicted RBP18.93■□□□□ 0.62
TSPAN3-208ENST00000560514 PCOLCE2Q9UKZ9 415 aa18.93■□□□□ 0.62
TSPAN3-208ENST00000560514 IGSF10Q6WRI0 2623 aa18.93■□□□□ 0.62
TSPAN3-208ENST00000560514 SMG1Q96Q15 3661 aaKnown RBP18.93■□□□□ 0.62
TSPAN3-208ENST00000560514 A0A1B0GTW7 788 aa18.92■□□□□ 0.62
TSPAN3-208ENST00000560514 COCHO43405 550 aa18.92■□□□□ 0.62
TSPAN3-208ENST00000560514 ZIC2O95409 532 aaPredicted RBP18.92■□□□□ 0.62
TSPAN3-208ENST00000560514 CER1O95813 267 aa18.92■□□□□ 0.62
TSPAN3-208ENST00000560514 IRF1P10914 325 aa18.92■□□□□ 0.62
TSPAN3-208ENST00000560514 MAOBP27338 520 aa18.92■□□□□ 0.62
TSPAN3-208ENST00000560514 ALCAMQ13740 583 aa18.92■□□□□ 0.62
TSPAN3-208ENST00000560514 SLCO6A1Q86UG4 719 aa18.92■□□□□ 0.62
TSPAN3-208ENST00000560514 TMEM25Q86YD3 366 aa18.92■□□□□ 0.62
TSPAN3-208ENST00000560514 MIB1Q86YT6 1006 aa18.92■□□□□ 0.62
TSPAN3-208ENST00000560514 CBWD1Q9BRT8 395 aa18.92■□□□□ 0.62
TSPAN3-208ENST00000560514 STRA6Q9BX79 667 aa18.92■□□□□ 0.62
TSPAN3-208ENST00000560514 MIR1-1HGQ9H1L0 117 aa18.92■□□□□ 0.62
TSPAN3-208ENST00000560514 CCDC39Q9UFE4 941 aa18.92■□□□□ 0.62
TSPAN3-208ENST00000560514 KIAA0391O15091 583 aaKnown RBP18.91■□□□□ 0.62
TSPAN3-208ENST00000560514 CD6P30203 668 aa18.91■□□□□ 0.62
TSPAN3-208ENST00000560514 RABEP1Q15276 862 aa18.91■□□□□ 0.62
TSPAN3-208ENST00000560514 IL27RAQ6UWB1 636 aa18.91■□□□□ 0.62
TSPAN3-208ENST00000560514 TMPRSS7Q7RTY8 843 aa18.91■□□□□ 0.62
TSPAN3-208ENST00000560514 LIMS2Q7Z4I7 341 aa18.91■□□□□ 0.62
TSPAN3-208ENST00000560514 BBC3Q96PG8 261 aaPredicted RBP18.91■□□□□ 0.62
TSPAN3-208ENST00000560514 ACOX2Q99424 681 aa18.91■□□□□ 0.62
TSPAN3-208ENST00000560514 CDC6Q99741 560 aa18.91■□□□□ 0.62
TSPAN3-208ENST00000560514 GAREM1Q9H706 876 aa18.91■□□□□ 0.62
TSPAN3-208ENST00000560514 STK17AQ9UEE5 414 aa18.91■□□□□ 0.62
TSPAN3-208ENST00000560514 CHORDC1Q9UHD1 332 aaPredicted RBP18.91■□□□□ 0.62
TSPAN3-208ENST00000560514 RAD54BQ9Y620 910 aa18.91■□□□□ 0.62
TSPAN3-208ENST00000560514 ATP8B3O60423 1300 aa18.91■□□□□ 0.62
TSPAN3-208ENST00000560514 CELSR3Q9NYQ7 3312 aa18.91■□□□□ 0.62
TSPAN3-208ENST00000560514 ZNF233A6NK53 670 aa18.9■□□□□ 0.62
TSPAN3-208ENST00000560514 NEDD8-MDP1E9PL57 170 aa18.9■□□□□ 0.62
TSPAN3-208ENST00000560514 TRIM24O15164 1050 aa18.9■□□□□ 0.62
TSPAN3-208ENST00000560514 IDEP14735 1019 aa18.9■□□□□ 0.62
TSPAN3-208ENST00000560514 PTPN1P18031 435 aaKnown RBP18.9■□□□□ 0.62
TSPAN3-208ENST00000560514 MATKP42679 507 aa18.9■□□□□ 0.62
TSPAN3-208ENST00000560514 TNNC1P63316 161 aa18.9■□□□□ 0.62
TSPAN3-208ENST00000560514 STARD3Q14849 445 aa18.9■□□□□ 0.62
TSPAN3-208ENST00000560514 SV2BQ7L1I2 683 aa18.9■□□□□ 0.62
TSPAN3-208ENST00000560514 GALNT15Q8N3T1 639 aa18.9■□□□□ 0.62
TSPAN3-208ENST00000560514 ZCCHC9Q8N567 271 aaKnown RBP18.9■□□□□ 0.62
TSPAN3-208ENST00000560514 OR5B17Q8NGF7 314 aa18.9■□□□□ 0.62
TSPAN3-208ENST00000560514 ZFRQ96KR1 1074 aaKnown RBP18.9■□□□□ 0.62
TSPAN3-208ENST00000560514 MRGPRX1Q96LB2 322 aa18.9■□□□□ 0.62
TSPAN3-208ENST00000560514 GABRG3Q99928 467 aa18.9■□□□□ 0.62
TSPAN3-208ENST00000560514 MRPL45Q9BRJ2 306 aaKnown RBP18.9■□□□□ 0.62
TSPAN3-208ENST00000560514 BBS2Q9BXC9 721 aa18.9■□□□□ 0.62
TSPAN3-208ENST00000560514 ZNF518BQ9C0D4 1074 aa18.9■□□□□ 0.62
TSPAN3-208ENST00000560514 TM7SF3Q9NS93 570 aa18.9■□□□□ 0.62
TSPAN3-208ENST00000560514 DKK4Q9UBT3 224 aa18.9■□□□□ 0.62
TSPAN3-208ENST00000560514 GOLGA4Q13439 2230 aaKnown RBP18.9■□□□□ 0.62
TSPAN3-208ENST00000560514 GOLGA8CPA6NN73 597 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms