RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 PHF21AQ96BD5 680 aa13.91□□□□□ -0.18
TRAF3-208ENST00000560371 ADAM2Q99965 735 aa13.91□□□□□ -0.18
TRAF3-208ENST00000560371 COPS7BQ9H9Q2 264 aaPredicted RBP13.91□□□□□ -0.18
TRAF3-208ENST00000560371 SMPD4Q9NXE4 827 aa13.91□□□□□ -0.18
TRAF3-208ENST00000560371 MYH2Q9UKX2 1941 aa13.91□□□□□ -0.18
TRAF3-208ENST00000560371 TCRBV5S4A2TA0A5A2 114 aa13.91□□□□□ -0.18
TRAF3-208ENST00000560371 CFAP73A6NFT4 308 aa13.91□□□□□ -0.18
TRAF3-208ENST00000560371 JCHAINP01591 159 aa13.91□□□□□ -0.18
TRAF3-208ENST00000560371 ATXN3P54252 364 aaPredicted RBP13.91□□□□□ -0.18
TRAF3-208ENST00000560371 DDR1Q08345 913 aa13.91□□□□□ -0.18
TRAF3-208ENST00000560371 PPM1LQ5SGD2 360 aa13.91□□□□□ -0.18
TRAF3-208ENST00000560371 CES5AQ6NT32 575 aa13.91□□□□□ -0.18
TRAF3-208ENST00000560371 JADE3Q92613 823 aa13.91□□□□□ -0.18
TRAF3-208ENST00000560371 C17orf80Q9BSJ5 609 aa13.91□□□□□ -0.18
TRAF3-208ENST00000560371 ASB7Q9H672 318 aa13.91□□□□□ -0.18
TRAF3-208ENST00000560371 SMARCAL1Q9NZC9 954 aa13.91□□□□□ -0.18
TRAF3-208ENST00000560371 H2AFY2Q9P0M6 372 aaPredicted RBP13.91□□□□□ -0.18
TRAF3-208ENST00000560371 KLHL2O95198 593 aa13.9□□□□□ -0.18
TRAF3-208ENST00000560371 RRM1P23921 792 aa13.9□□□□□ -0.18
TRAF3-208ENST00000560371 ZNF438Q7Z4V0 828 aa13.9□□□□□ -0.18
TRAF3-208ENST00000560371 CATSPER1Q8NEC5 780 aa13.9□□□□□ -0.18
TRAF3-208ENST00000560371 ROPN1BQ9BZX4 212 aaPredicted RBP13.9□□□□□ -0.18
TRAF3-208ENST00000560371 PDGFDQ9GZP0 370 aaPredicted RBP13.9□□□□□ -0.18
TRAF3-208ENST00000560371 ROPN1Q9HAT0 212 aaPredicted RBP13.9□□□□□ -0.18
TRAF3-208ENST00000560371 DMAP1Q9NPF5 467 aaPredicted RBP13.9□□□□□ -0.18
TRAF3-208ENST00000560371 UXTQ9UBK9 157 aaPredicted RBP13.9□□□□□ -0.18
TRAF3-208ENST00000560371 TRPV2Q9Y5S1 764 aa13.9□□□□□ -0.18
TRAF3-208ENST00000560371 CARNS1A5YM72 827 aa13.9□□□□□ -0.18
TRAF3-208ENST00000560371 ANKRD65E5RJM6 399 aa13.9□□□□□ -0.18
TRAF3-208ENST00000560371 AIM2O14862 343 aa13.9□□□□□ -0.18
TRAF3-208ENST00000560371 TBX4P57082 545 aa13.9□□□□□ -0.18
TRAF3-208ENST00000560371 CENPPQ6IPU0 288 aa13.9□□□□□ -0.18
TRAF3-208ENST00000560371 LVRNQ6Q4G3 990 aa13.9□□□□□ -0.18
TRAF3-208ENST00000560371 WNK4Q96J92 1243 aa13.9□□□□□ -0.18
TRAF3-208ENST00000560371 TINF2Q9BSI4 451 aa13.9□□□□□ -0.18
TRAF3-208ENST00000560371 TSPAN16Q9UKR8 245 aa13.9□□□□□ -0.18
TRAF3-208ENST00000560371 CHN1P15882 459 aa13.9□□□□□ -0.18
TRAF3-208ENST00000560371 HOXA10P31260 410 aaPredicted RBP13.9□□□□□ -0.18
TRAF3-208ENST00000560371 FNTAP49354 379 aa13.9□□□□□ -0.18
TRAF3-208ENST00000560371 PSMC6P62333 389 aa13.9□□□□□ -0.18
TRAF3-208ENST00000560371 SLC29A2Q14542 456 aa13.9□□□□□ -0.18
TRAF3-208ENST00000560371 ZNF555Q8NEP9 628 aa13.9□□□□□ -0.18
TRAF3-208ENST00000560371 CSGALNACT1Q8TDX6 532 aa13.9□□□□□ -0.18
TRAF3-208ENST00000560371 NRCAMQ92823 1304 aa13.9□□□□□ -0.18
TRAF3-208ENST00000560371 UBE2OQ9C0C9 1292 aaKnown RBP13.9□□□□□ -0.18
TRAF3-208ENST00000560371 RRN3Q9NYV6 651 aa13.9□□□□□ -0.18
TRAF3-208ENST00000560371 IFRD1O00458 451 aaPredicted RBP13.9□□□□□ -0.18
TRAF3-208ENST00000560371 FAM107AO95990 144 aa13.9□□□□□ -0.18
TRAF3-208ENST00000560371 PTPRAP18433 802 aa13.9□□□□□ -0.18
TRAF3-208ENST00000560371 YWHAQP27348 245 aa13.9□□□□□ -0.18
TRAF3-208ENST00000560371 CAPZA2P47755 286 aa13.9□□□□□ -0.18
TRAF3-208ENST00000560371 BTKQ06187 659 aa13.9□□□□□ -0.18
TRAF3-208ENST00000560371 SGCGQ13326 291 aa13.9□□□□□ -0.18
TRAF3-208ENST00000560371 IFNLR1Q8IU57 520 aaPredicted RBP13.9□□□□□ -0.18
TRAF3-208ENST00000560371 CCDC126Q96EE4 140 aa13.9□□□□□ -0.18
TRAF3-208ENST00000560371 A1CFQ9NQ94 594 aaKnown RBP13.9□□□□□ -0.18
TRAF3-208ENST00000560371 MYO1GB0I1T2 1018 aa13.9□□□□□ -0.18
TRAF3-208ENST00000560371 ACKR2O00590 384 aa13.9□□□□□ -0.18
TRAF3-208ENST00000560371 TIMM44O43615 452 aa13.9□□□□□ -0.18
TRAF3-208ENST00000560371 SUPT7LO94864 414 aa13.9□□□□□ -0.18
TRAF3-208ENST00000560371 MLNP12872 115 aa13.9□□□□□ -0.18
TRAF3-208ENST00000560371 ITGALP20701 1170 aa13.9□□□□□ -0.18
TRAF3-208ENST00000560371 KCNK10P57789 538 aa13.9□□□□□ -0.18
TRAF3-208ENST00000560371 MAN1C1Q9NR34 630 aa13.9□□□□□ -0.18
TRAF3-208ENST00000560371 F8VZ95 297 aa13.9□□□□□ -0.19
TRAF3-208ENST00000560371 ERVK-10P10266 1014 aa13.9□□□□□ -0.19
TRAF3-208ENST00000560371 CCNJLQ8IV13 435 aa13.9□□□□□ -0.19
TRAF3-208ENST00000560371 ECSITQ9BQ95 431 aa13.9□□□□□ -0.19
TRAF3-208ENST00000560371 ELOVL4Q9GZR5 314 aa13.9□□□□□ -0.19
TRAF3-208ENST00000560371 RAMP2O60895 175 aa13.89□□□□□ -0.19
TRAF3-208ENST00000560371 SERPINF2P08697 491 aa13.89□□□□□ -0.19
TRAF3-208ENST00000560371 DARSP14868 501 aaKnown RBP13.89□□□□□ -0.19
TRAF3-208ENST00000560371 MYBPC2Q14324 1141 aa13.89□□□□□ -0.19
TRAF3-208ENST00000560371 MARC1Q5VT66 337 aa13.89□□□□□ -0.19
TRAF3-208ENST00000560371 ZPBP2Q6X784 338 aa13.89□□□□□ -0.19
TRAF3-208ENST00000560371 TFAP2DQ7Z6R9 452 aa13.89□□□□□ -0.19
TRAF3-208ENST00000560371 FAM136AQ96C01 138 aa13.89□□□□□ -0.19
TRAF3-208ENST00000560371 XPO6Q96QU8 1125 aaKnown RBP13.89□□□□□ -0.19
TRAF3-208ENST00000560371 LRRC40Q9H9A6 602 aa13.89□□□□□ -0.19
TRAF3-208ENST00000560371 UTP6Q9NYH9 597 aaKnown RBP13.89□□□□□ -0.19
TRAF3-208ENST00000560371 IRF6O14896 467 aa13.89□□□□□ -0.19
TRAF3-208ENST00000560371 SKOR1P84550 965 aa13.89□□□□□ -0.19
TRAF3-208ENST00000560371 TTI2Q6NXR4 508 aa13.89□□□□□ -0.19
TRAF3-208ENST00000560371 LRRC8BQ6P9F7 803 aa13.89□□□□□ -0.19
TRAF3-208ENST00000560371 TNIP2Q8NFZ5 429 aa13.89□□□□□ -0.19
TRAF3-208ENST00000560371 ZFP42Q96MM3 310 aa13.89□□□□□ -0.19
TRAF3-208ENST00000560371 KLF6Q99612 283 aaPredicted RBP13.89□□□□□ -0.19
TRAF3-208ENST00000560371 ZCCHC17Q9NP64 241 aaKnown RBP13.89□□□□□ -0.19
TRAF3-208ENST00000560371 RBM22Q9NW64 420 aaKnown RBP eCLIP13.89□□□□□ -0.19
TRAF3-208ENST00000560371 SPTLC1O15269 473 aa13.89□□□□□ -0.19
TRAF3-208ENST00000560371 CABYRO75952 493 aa13.89□□□□□ -0.19
TRAF3-208ENST00000560371 ACAT1P24752 427 aaKnown RBP13.89□□□□□ -0.19
TRAF3-208ENST00000560371 FAM162AQ96A26 154 aa13.89□□□□□ -0.19
TRAF3-208ENST00000560371 ZSWIM1Q9BR11 485 aa13.89□□□□□ -0.19
TRAF3-208ENST00000560371 MSRAQ9UJ68 235 aa13.89□□□□□ -0.19
TRAF3-208ENST00000560371 FAM86B1E9PN63 330 aa13.89□□□□□ -0.19
TRAF3-208ENST00000560371 AKAP10O43572 662 aa13.89□□□□□ -0.19
TRAF3-208ENST00000560371 TRIM16O95361 564 aa13.89□□□□□ -0.19
TRAF3-208ENST00000560371 PDHA1P08559 390 aa13.89□□□□□ -0.19
TRAF3-208ENST00000560371 FAM86B2P0C5J1 330 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms