RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 GAL3ST3Q96A11 431 aa14.27□□□□□ -0.13
CSPG4P12-202ENST00000559989 AP1S3Q96PC3 154 aa14.27□□□□□ -0.13
CSPG4P12-202ENST00000559989 AKAP7Q9P0M2 348 aaPredicted RBP14.27□□□□□ -0.13
CSPG4P12-202ENST00000559989 IRAK3Q9Y616 596 aa14.27□□□□□ -0.13
CSPG4P12-202ENST00000559989 KATNA1O75449 491 aa14.26□□□□□ -0.13
CSPG4P12-202ENST00000559989 HIRAP54198 1017 aaPredicted RBP14.26□□□□□ -0.13
CSPG4P12-202ENST00000559989 KCNV1Q6PIU1 500 aa14.26□□□□□ -0.13
CSPG4P12-202ENST00000559989 HAUS6Q7Z4H7 955 aa14.26□□□□□ -0.13
CSPG4P12-202ENST00000559989 C9orf16Q9BUW7 83 aa14.26□□□□□ -0.13
CSPG4P12-202ENST00000559989 EMILIN2Q9BXX0 1053 aa14.26□□□□□ -0.13
CSPG4P12-202ENST00000559989 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.26□□□□□ -0.13
CSPG4P12-202ENST00000559989 AAR2Q9Y312 384 aaKnown RBP14.26□□□□□ -0.13
CSPG4P12-202ENST00000559989 CLUP10909 449 aa14.26□□□□□ -0.13
CSPG4P12-202ENST00000559989 OMPP47874 163 aa14.26□□□□□ -0.13
CSPG4P12-202ENST00000559989 GALNT3Q14435 633 aa14.26□□□□□ -0.13
CSPG4P12-202ENST00000559989 TRMT5Q32P41 509 aaKnown RBP14.26□□□□□ -0.13
CSPG4P12-202ENST00000559989 PDPK2PQ6A1A2 396 aa14.26□□□□□ -0.13
CSPG4P12-202ENST00000559989 TRAPPC11Q7Z392 1133 aa14.26□□□□□ -0.13
CSPG4P12-202ENST00000559989 FAM20CQ8IXL6 584 aa14.26□□□□□ -0.13
CSPG4P12-202ENST00000559989 TMEM132CQ8N3T6 1108 aa14.26□□□□□ -0.13
CSPG4P12-202ENST00000559989 CHORDC1Q9UHD1 332 aaPredicted RBP14.26□□□□□ -0.13
CSPG4P12-202ENST00000559989 CHL1O00533 1208 aa14.26□□□□□ -0.13
CSPG4P12-202ENST00000559989 ZNF185O15231 689 aa14.26□□□□□ -0.13
CSPG4P12-202ENST00000559989 TNNI3P19429 210 aa14.26□□□□□ -0.13
CSPG4P12-202ENST00000559989 TKTP29401 623 aaKnown RBP14.26□□□□□ -0.13
CSPG4P12-202ENST00000559989 SCAIQ8N9R8 606 aa14.26□□□□□ -0.13
CSPG4P12-202ENST00000559989 DNAJC1Q96KC8 554 aaKnown RBP14.26□□□□□ -0.13
CSPG4P12-202ENST00000559989 VCPKMTQ9H867 229 aa14.26□□□□□ -0.13
CSPG4P12-202ENST00000559989 GPR108Q9NPR9 543 aa14.26□□□□□ -0.13
CSPG4P12-202ENST00000559989 ADGRG1Q9Y653 693 aa14.26□□□□□ -0.13
CSPG4P12-202ENST00000559989 A0A1W2PP64 1363 aa14.26□□□□□ -0.13
CSPG4P12-202ENST00000559989 CYP26A1O43174 497 aa14.26□□□□□ -0.13
CSPG4P12-202ENST00000559989 ADCY6O43306 1168 aa14.26□□□□□ -0.13
CSPG4P12-202ENST00000559989 MYL4P12829 197 aa14.26□□□□□ -0.13
CSPG4P12-202ENST00000559989 DYNLL1P63167 89 aaKnown RBP14.26□□□□□ -0.13
CSPG4P12-202ENST00000559989 RBP5P82980 135 aa14.26□□□□□ -0.13
CSPG4P12-202ENST00000559989 ITGADQ13349 1161 aa14.26□□□□□ -0.13
CSPG4P12-202ENST00000559989 TMEM132DQ14C87 1099 aa14.26□□□□□ -0.13
CSPG4P12-202ENST00000559989 ADPRHL2Q9NX46 363 aa14.26□□□□□ -0.13
CSPG4P12-202ENST00000559989 ARHGAP28Q9P2N2 729 aa14.26□□□□□ -0.13
CSPG4P12-202ENST00000559989 SKAP2O75563 359 aaPredicted RBP14.26□□□□□ -0.13
CSPG4P12-202ENST00000559989 UMPSP11172 480 aa14.26□□□□□ -0.13
CSPG4P12-202ENST00000559989 PLCL1Q15111 1095 aa14.26□□□□□ -0.13
CSPG4P12-202ENST00000559989 EFHC1Q5JVL4 640 aa14.26□□□□□ -0.13
CSPG4P12-202ENST00000559989 GPRC5DQ9NZD1 345 aa14.26□□□□□ -0.13
CSPG4P12-202ENST00000559989 LIN7AO14910 233 aaPredicted RBP14.26□□□□□ -0.13
CSPG4P12-202ENST00000559989 ZBTB5O15062 677 aa14.26□□□□□ -0.13
CSPG4P12-202ENST00000559989 HS6ST1O60243 411 aa14.26□□□□□ -0.13
CSPG4P12-202ENST00000559989 NUDT14O95848 222 aa14.26□□□□□ -0.13
CSPG4P12-202ENST00000559989 PDGFRAP16234 1089 aa14.26□□□□□ -0.13
CSPG4P12-202ENST00000559989 FAUP35544 74 aaKnown RBP14.26□□□□□ -0.13
CSPG4P12-202ENST00000559989 CDK8P49336 464 aa14.26□□□□□ -0.13
CSPG4P12-202ENST00000559989 FAM98CQ17RN3 349 aaKnown RBP14.26□□□□□ -0.13
CSPG4P12-202ENST00000559989 S100ZQ8WXG8 99 aa14.26□□□□□ -0.13
CSPG4P12-202ENST00000559989 CPA5Q8WXQ8 436 aa14.26□□□□□ -0.13
CSPG4P12-202ENST00000559989 TMEM237Q96Q45 408 aa14.26□□□□□ -0.13
CSPG4P12-202ENST00000559989 ASNSP08243 561 aa14.25□□□□□ -0.13
CSPG4P12-202ENST00000559989 ALDH3A2P51648 485 aa14.25□□□□□ -0.13
CSPG4P12-202ENST00000559989 SV2CQ496J9 727 aa14.25□□□□□ -0.13
CSPG4P12-202ENST00000559989 ERO1BQ86YB8 467 aa14.25□□□□□ -0.13
CSPG4P12-202ENST00000559989 ARID3BQ8IVW6 561 aaPredicted RBP14.25□□□□□ -0.13
CSPG4P12-202ENST00000559989 ZNF512Q96ME7 567 aaPredicted RBP14.25□□□□□ -0.13
CSPG4P12-202ENST00000559989 MCUBQ9NWR8 336 aa14.25□□□□□ -0.13
CSPG4P12-202ENST00000559989 STK36Q9NRP7 1315 aa14.25□□□□□ -0.13
CSPG4P12-202ENST00000559989 USP17L3A6NCW0 530 aa14.25□□□□□ -0.13
CSPG4P12-202ENST00000559989 USP17L4A6NCW7 530 aa14.25□□□□□ -0.13
CSPG4P12-202ENST00000559989 LRPAP1P30533 357 aa14.25□□□□□ -0.13
CSPG4P12-202ENST00000559989 HPCAL1P37235 193 aa14.25□□□□□ -0.13
CSPG4P12-202ENST00000559989 PFKFB3Q16875 520 aaPredicted RBP14.25□□□□□ -0.13
CSPG4P12-202ENST00000559989 HLA-DQA1Q5Y7H0 255 aa14.25□□□□□ -0.13
CSPG4P12-202ENST00000559989 B3GNT6Q6ZMB0 384 aa14.25□□□□□ -0.13
CSPG4P12-202ENST00000559989 USP17L1Q7RTZ2 530 aa14.25□□□□□ -0.13
CSPG4P12-202ENST00000559989 LRRC6Q86X45 466 aa14.25□□□□□ -0.13
CSPG4P12-202ENST00000559989 CLVS1Q8IUQ0 354 aaPredicted RBP14.25□□□□□ -0.13
CSPG4P12-202ENST00000559989 DNAJC10Q8IXB1 793 aa14.25□□□□□ -0.13
CSPG4P12-202ENST00000559989 MYLPFQ96A32 169 aa14.25□□□□□ -0.13
CSPG4P12-202ENST00000559989 MAGEB10Q96LZ2 347 aaPredicted RBP14.25□□□□□ -0.13
CSPG4P12-202ENST00000559989 CNOT7Q9UIV1 285 aaKnown RBP14.25□□□□□ -0.13
CSPG4P12-202ENST00000559989 PRKAR2AP13861 404 aaKnown RBP14.25□□□□□ -0.13
CSPG4P12-202ENST00000559989 SWSAP1Q6NVH7 229 aa14.25□□□□□ -0.13
CSPG4P12-202ENST00000559989 ZSWIM5Q9P217 1185 aa14.25□□□□□ -0.13
CSPG4P12-202ENST00000559989 N6AMT1Q9Y5N5 214 aa14.25□□□□□ -0.13
CSPG4P12-202ENST00000559989 CCDC154A6NI56 674 aa14.25□□□□□ -0.13
CSPG4P12-202ENST00000559989 POTECB2RU33 542 aa14.25□□□□□ -0.13
CSPG4P12-202ENST00000559989 RARBP10826 455 aa14.25□□□□□ -0.13
CSPG4P12-202ENST00000559989 ETFBP38117 255 aa14.25□□□□□ -0.13
CSPG4P12-202ENST00000559989 SPPL2AQ8TCT8 520 aa14.25□□□□□ -0.13
CSPG4P12-202ENST00000559989 FIG4Q92562 907 aa14.25□□□□□ -0.13
CSPG4P12-202ENST00000559989 SERAC1Q96JX3 654 aa14.25□□□□□ -0.13
CSPG4P12-202ENST00000559989 GABBR1Q9UBS5 961 aa14.25□□□□□ -0.13
CSPG4P12-202ENST00000559989 RBMXL2O75526 392 aaKnown RBP14.25□□□□□ -0.13
CSPG4P12-202ENST00000559989 RPS6KA5O75582 802 aa14.25□□□□□ -0.13
CSPG4P12-202ENST00000559989 TCEA3O75764 348 aa14.25□□□□□ -0.13
CSPG4P12-202ENST00000559989 PRG2P13727 222 aa14.25□□□□□ -0.13
CSPG4P12-202ENST00000559989 ITGA8P53708 1063 aa14.25□□□□□ -0.13
CSPG4P12-202ENST00000559989 TCAIMQ8N3R3 496 aa14.25□□□□□ -0.13
CSPG4P12-202ENST00000559989 NSUN6Q8TEA1 469 aaKnown RBP14.25□□□□□ -0.13
CSPG4P12-202ENST00000559989 KBTBD7Q8WVZ9 684 aa14.25□□□□□ -0.13
CSPG4P12-202ENST00000559989 BHLHE41Q9C0J9 482 aaPredicted RBP14.25□□□□□ -0.13
CSPG4P12-202ENST00000559989 SLC38A7Q9NVC3 462 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms