RNA–Protein interactions for RNA: ENST00000559866.1

AC243562.3-201, humanhuman

TSL 1 (best) BASIC

Gene AC243562.3, Length 1,212 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC243562.3-201ENST00000559866 L1TD1Q5T7N2 865 aaKnown RBP16.61■□□□□ 0.25
AC243562.3-201ENST00000559866 TOGARAM2Q6ZUX3 1019 aa16.61■□□□□ 0.25
AC243562.3-201ENST00000559866 TMEM25Q86YD3 366 aa16.61■□□□□ 0.25
AC243562.3-201ENST00000559866 MYCBPAPQ8TBZ2 947 aa16.61■□□□□ 0.25
AC243562.3-201ENST00000559866 NOC3LQ8WTT2 800 aaKnown RBP16.61■□□□□ 0.25
AC243562.3-201ENST00000559866 CACTINQ8WUQ7 758 aaKnown RBP16.61■□□□□ 0.25
AC243562.3-201ENST00000559866 C8orf48Q96LL4 319 aa16.61■□□□□ 0.25
AC243562.3-201ENST00000559866 ZNF518BQ9C0D4 1074 aa16.61■□□□□ 0.25
AC243562.3-201ENST00000559866 MRPL44Q9H9J2 332 aaKnown RBP16.61■□□□□ 0.25
AC243562.3-201ENST00000559866 PCOLCE2Q9UKZ9 415 aa16.61■□□□□ 0.25
AC243562.3-201ENST00000559866 R3HCC1Q9Y3T6 440 aaKnown RBP16.61■□□□□ 0.25
AC243562.3-201ENST00000559866 E2F8A0AVK6 867 aa16.6■□□□□ 0.25
AC243562.3-201ENST00000559866 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.6■□□□□ 0.25
AC243562.3-201ENST00000559866 TRIM66O15016 1216 aa16.6■□□□□ 0.25
AC243562.3-201ENST00000559866 LDHAP00338 332 aaKnown RBP16.6■□□□□ 0.25
AC243562.3-201ENST00000559866 TMEM191BP0C7N4 346 aa16.6■□□□□ 0.25
AC243562.3-201ENST00000559866 GAP43P17677 238 aa16.6■□□□□ 0.25
AC243562.3-201ENST00000559866 NTSR1P30989 418 aa16.6■□□□□ 0.25
AC243562.3-201ENST00000559866 PGFP49763 221 aa16.6■□□□□ 0.25
AC243562.3-201ENST00000559866 BNC1Q01954 994 aa16.6■□□□□ 0.25
AC243562.3-201ENST00000559866 GAD2Q05329 585 aa16.6■□□□□ 0.25
AC243562.3-201ENST00000559866 SLC14A1Q13336 389 aa16.6■□□□□ 0.25
AC243562.3-201ENST00000559866 HNRNPDQ14103 355 aaKnown RBP16.6■□□□□ 0.25
AC243562.3-201ENST00000559866 ADAM32Q8TC27 787 aa16.6■□□□□ 0.25
AC243562.3-201ENST00000559866 IPO4Q8TEX9 1081 aaKnown RBP16.6■□□□□ 0.25
AC243562.3-201ENST00000559866 DNAJC19Q96DA6 116 aa16.6■□□□□ 0.25
AC243562.3-201ENST00000559866 P2RY11Q96G91 374 aa16.6■□□□□ 0.25
AC243562.3-201ENST00000559866 ZNF419Q96HQ0 510 aaPredicted RBP16.6■□□□□ 0.25
AC243562.3-201ENST00000559866 HPDLQ96IR7 371 aa16.6■□□□□ 0.25
AC243562.3-201ENST00000559866 ACCSQ96QU6 501 aa16.6■□□□□ 0.25
AC243562.3-201ENST00000559866 CCSER2Q9H7U1 834 aa16.6■□□□□ 0.25
AC243562.3-201ENST00000559866 INTS13Q9NVM9 706 aa16.6■□□□□ 0.25
AC243562.3-201ENST00000559866 PRRT4C9JH25 899 aa16.59■□□□□ 0.25
AC243562.3-201ENST00000559866 GCNT3O95395 438 aa16.59■□□□□ 0.25
AC243562.3-201ENST00000559866 PRB1P04280 392 aa16.59■□□□□ 0.25
AC243562.3-201ENST00000559866 SYPP08247 313 aa16.59■□□□□ 0.25
AC243562.3-201ENST00000559866 IRF1P10914 325 aa16.59■□□□□ 0.25
AC243562.3-201ENST00000559866 DPH6Q7L8W6 267 aa16.59■□□□□ 0.25
AC243562.3-201ENST00000559866 HS2ST1Q7LGA3 356 aa16.59■□□□□ 0.25
AC243562.3-201ENST00000559866 RABEPKQ7Z6M1 372 aa16.59■□□□□ 0.25
AC243562.3-201ENST00000559866 GLRX5Q86SX6 157 aa16.59■□□□□ 0.25
AC243562.3-201ENST00000559866 RGL4Q8IZJ4 473 aa16.59■□□□□ 0.25
AC243562.3-201ENST00000559866 SYCP3Q8IZU3 236 aa16.59■□□□□ 0.25
AC243562.3-201ENST00000559866 EPSTI1Q96J88 318 aa16.59■□□□□ 0.25
AC243562.3-201ENST00000559866 CEP295NLQ96MC4 621 aa16.59■□□□□ 0.25
AC243562.3-201ENST00000559866 SPHK2Q9NRA0 654 aa16.59■□□□□ 0.25
AC243562.3-201ENST00000559866 DEC1Q9P2X7 70 aa16.59■□□□□ 0.25
AC243562.3-201ENST00000559866 PCDHB9Q9Y5E1 797 aa16.59■□□□□ 0.25
AC243562.3-201ENST00000559866 PCDHB13Q9Y5F0 798 aa16.59■□□□□ 0.25
AC243562.3-201ENST00000559866 ASH1LQ9NR48 2969 aaKnown RBP16.58■□□□□ 0.24
AC243562.3-201ENST00000559866 VPS37CA5D8V6 355 aaPredicted RBP16.58■□□□□ 0.24
AC243562.3-201ENST00000559866 WASH3PC4AMC7 463 aa16.58■□□□□ 0.24
AC243562.3-201ENST00000559866 GARTP22102 1010 aa16.58■□□□□ 0.24
AC243562.3-201ENST00000559866 PPP3CCP48454 512 aa16.58■□□□□ 0.24
AC243562.3-201ENST00000559866 ALCAMQ13740 583 aa16.58■□□□□ 0.24
AC243562.3-201ENST00000559866 ANO4Q32M45 955 aa16.58■□□□□ 0.24
AC243562.3-201ENST00000559866 RRAGBQ5VZM2 374 aa16.58■□□□□ 0.24
AC243562.3-201ENST00000559866 SV2BQ7L1I2 683 aa16.58■□□□□ 0.24
AC243562.3-201ENST00000559866 SPRYD3Q8NCJ5 442 aa16.58■□□□□ 0.24
AC243562.3-201ENST00000559866 SCAMP5Q8TAC9 235 aa16.58■□□□□ 0.24
AC243562.3-201ENST00000559866 BAHD1Q8TBE0 780 aaPredicted RBP16.58■□□□□ 0.24
AC243562.3-201ENST00000559866 MRGPRX1Q96LB2 322 aa16.58■□□□□ 0.24
AC243562.3-201ENST00000559866 B3GNT5Q9BYG0 378 aa16.58■□□□□ 0.24
AC243562.3-201ENST00000559866 SCUBE2Q9NQ36 999 aa16.58■□□□□ 0.24
AC243562.3-201ENST00000559866 TBC1D14Q9P2M4 693 aa16.58■□□□□ 0.24
AC243562.3-201ENST00000559866 STARD13Q9Y3M8 1113 aa16.58■□□□□ 0.24
AC243562.3-201ENST00000559866 MYH10P35580 1976 aa16.58■□□□□ 0.24
AC243562.3-201ENST00000559866 GREM1O60565 184 aa16.57■□□□□ 0.24
AC243562.3-201ENST00000559866 ATXN1LP0C7T5 689 aaKnown RBP16.57■□□□□ 0.24
AC243562.3-201ENST00000559866 MAPRE1Q15691 268 aaKnown RBP16.57■□□□□ 0.24
AC243562.3-201ENST00000559866 TDRD10Q5VZ19 366 aaKnown RBP16.57■□□□□ 0.24
AC243562.3-201ENST00000559866 BTBD8Q5XKL5 378 aa16.57■□□□□ 0.24
AC243562.3-201ENST00000559866 TRMT11Q7Z4G4 463 aaKnown RBP16.57■□□□□ 0.24
AC243562.3-201ENST00000559866 DDX42Q86XP3 938 aaKnown RBP eCLIP16.57■□□□□ 0.24
AC243562.3-201ENST00000559866 CBWD2Q8IUF1 395 aa16.57■□□□□ 0.24
AC243562.3-201ENST00000559866 CHPFQ8IZ52 775 aa16.57■□□□□ 0.24
AC243562.3-201ENST00000559866 ZCCHC9Q8N567 271 aaKnown RBP16.57■□□□□ 0.24
AC243562.3-201ENST00000559866 GLIS3Q8NEA6 775 aa16.57■□□□□ 0.24
AC243562.3-201ENST00000559866 KCNV2Q8TDN2 545 aa16.57■□□□□ 0.24
AC243562.3-201ENST00000559866 SLITRK1Q96PX8 696 aa16.57■□□□□ 0.24
AC243562.3-201ENST00000559866 KCNK16Q96T55 309 aa16.57■□□□□ 0.24
AC243562.3-201ENST00000559866 MMS19Q96T76 1030 aa16.57■□□□□ 0.24
AC243562.3-201ENST00000559866 GABRG3Q99928 467 aa16.57■□□□□ 0.24
AC243562.3-201ENST00000559866 DNAJC17Q9NVM6 304 aaKnown RBP16.57■□□□□ 0.24
AC243562.3-201ENST00000559866 CACNA2D2Q9NY47 1150 aa16.57■□□□□ 0.24
AC243562.3-201ENST00000559866 CHORDC1Q9UHD1 332 aaPredicted RBP16.57■□□□□ 0.24
AC243562.3-201ENST00000559866 FNDC3AQ9Y2H6 1198 aaKnown RBP16.57■□□□□ 0.24
AC243562.3-201ENST00000559866 SLCO1B1Q9Y6L6 691 aa16.57■□□□□ 0.24
AC243562.3-201ENST00000559866 APC2O95996 2303 aa16.56■□□□□ 0.24
AC243562.3-201ENST00000559866 KCNJ18B7U540 433 aa16.56■□□□□ 0.24
AC243562.3-201ENST00000559866 ZNF217O75362 1048 aa16.56■□□□□ 0.24
AC243562.3-201ENST00000559866 C1QL1O75973 258 aa16.56■□□□□ 0.24
AC243562.3-201ENST00000559866 CD2BP2O95400 341 aaKnown RBP16.56■□□□□ 0.24
AC243562.3-201ENST00000559866 CST3P01034 146 aaPredicted RBP16.56■□□□□ 0.24
AC243562.3-201ENST00000559866 IDEP14735 1019 aa16.56■□□□□ 0.24
AC243562.3-201ENST00000559866 PDCP20941 246 aa16.56■□□□□ 0.24
AC243562.3-201ENST00000559866 YWHAQP27348 245 aa16.56■□□□□ 0.24
AC243562.3-201ENST00000559866 MYO1EQ12965 1108 aa16.56■□□□□ 0.24
AC243562.3-201ENST00000559866 KIAA1324Q6UXG2 1013 aaKnown RBP16.56■□□□□ 0.24
AC243562.3-201ENST00000559866 TMPRSS7Q7RTY8 843 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms