RNA–Protein interactions for RNA: ENST00000559822.1

SPG11-219, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-219ENST00000559822 GAB4Q2WGN9 574 aa12.97□□□□□ -0.33
SPG11-219ENST00000559822 EDRF1Q3B7T1 1238 aa12.97□□□□□ -0.33
SPG11-219ENST00000559822 PLK5Q496M5 336 aa12.97□□□□□ -0.33
SPG11-219ENST00000559822 C2orf27AQ580R0 203 aa12.97□□□□□ -0.33
SPG11-219ENST00000559822 IL31Q6EBC2 164 aa12.97□□□□□ -0.33
SPG11-219ENST00000559822 SPOPLQ6IQ16 392 aa12.97□□□□□ -0.33
SPG11-219ENST00000559822 RHBDF2Q6PJF5 856 aa12.97□□□□□ -0.33
SPG11-219ENST00000559822 FAXDC2Q96IV6 333 aa12.97□□□□□ -0.33
SPG11-219ENST00000559822 HNRNPABQ99729 332 aaKnown RBP12.97□□□□□ -0.33
SPG11-219ENST00000559822 SMOQ99835 787 aa12.97□□□□□ -0.33
SPG11-219ENST00000559822 NIF3L1Q9GZT8 377 aa12.97□□□□□ -0.33
SPG11-219ENST00000559822 CCSER2Q9H7U1 834 aa12.97□□□□□ -0.33
SPG11-219ENST00000559822 TMEM8AQ9HCN3 771 aa12.97□□□□□ -0.33
SPG11-219ENST00000559822 ARHGEF4Q9NR80 690 aa12.97□□□□□ -0.33
SPG11-219ENST00000559822 FAM49BQ9NUQ9 324 aa12.97□□□□□ -0.33
SPG11-219ENST00000559822 RMND1Q9NWS8 449 aa12.97□□□□□ -0.33
SPG11-219ENST00000559822 MAPK8IP1Q9UQF2 711 aa12.97□□□□□ -0.33
SPG11-219ENST00000559822 PCDHA5Q9Y5H7 936 aa12.97□□□□□ -0.33
SPG11-219ENST00000559822 DNAH14Q0VDD8 3507 aa12.96□□□□□ -0.33
SPG11-219ENST00000559822 DCDC2BA2VCK2 349 aa12.96□□□□□ -0.33
SPG11-219ENST00000559822 ZNF202O95125 648 aa12.96□□□□□ -0.33
SPG11-219ENST00000559822 TRIM49P0CI25 452 aa12.96□□□□□ -0.33
SPG11-219ENST00000559822 TRIM49CP0CI26 452 aa12.96□□□□□ -0.33
SPG11-219ENST00000559822 ADORA2BP29275 332 aa12.96□□□□□ -0.33
SPG11-219ENST00000559822 GBP1P32455 592 aa12.96□□□□□ -0.33
SPG11-219ENST00000559822 ATP5C1P36542 298 aaKnown RBP12.96□□□□□ -0.33
SPG11-219ENST00000559822 MPLP40238 635 aa12.96□□□□□ -0.33
SPG11-219ENST00000559822 TNFRSF4P43489 277 aa12.96□□□□□ -0.33
SPG11-219ENST00000559822 ORC1Q13415 861 aa12.96□□□□□ -0.33
SPG11-219ENST00000559822 CRY1Q16526 586 aa12.96□□□□□ -0.33
SPG11-219ENST00000559822 EOGTQ5NDL2 527 aa12.96□□□□□ -0.33
SPG11-219ENST00000559822 LY6G5CQ5SRR4 150 aa12.96□□□□□ -0.33
SPG11-219ENST00000559822 C1orf220Q5T0J3 134 aa12.96□□□□□ -0.33
SPG11-219ENST00000559822 KRT39Q6A163 491 aa12.96□□□□□ -0.33
SPG11-219ENST00000559822 TRMT11Q7Z4G4 463 aaKnown RBP12.96□□□□□ -0.33
SPG11-219ENST00000559822 TADA2BQ86TJ2 420 aa12.96□□□□□ -0.33
SPG11-219ENST00000559822 C12orf29Q8N999 325 aa12.96□□□□□ -0.33
SPG11-219ENST00000559822 ZMIZ2Q8NF64 920 aa12.96□□□□□ -0.33
SPG11-219ENST00000559822 TAS1R2Q8TE23 839 aa12.96□□□□□ -0.33
SPG11-219ENST00000559822 ELMO3Q96BJ8 720 aa12.96□□□□□ -0.33
SPG11-219ENST00000559822 CYFIP2Q96F07 1278 aa12.96□□□□□ -0.33
SPG11-219ENST00000559822 ZFRQ96KR1 1074 aaKnown RBP12.96□□□□□ -0.33
SPG11-219ENST00000559822 CNOT6LQ96LI5 555 aaKnown RBP12.96□□□□□ -0.33
SPG11-219ENST00000559822 VPS45Q9NRW7 570 aa12.96□□□□□ -0.33
SPG11-219ENST00000559822 POLR3BQ9NW08 1133 aaPredicted RBP12.96□□□□□ -0.33
SPG11-219ENST00000559822 HMGXB4Q9UGU5 601 aa12.96□□□□□ -0.33
SPG11-219ENST00000559822 LSM7Q9UK45 103 aaKnown RBP12.96□□□□□ -0.33
SPG11-219ENST00000559822 SCML2Q9UQR0 700 aa12.96□□□□□ -0.33
SPG11-219ENST00000559822 MYH10P35580 1976 aa12.96□□□□□ -0.34
SPG11-219ENST00000559822 NCOR2Q9Y618 2525 aa12.95□□□□□ -0.34
SPG11-219ENST00000559822 A0A0A0MRY4 1105 aa12.95□□□□□ -0.34
SPG11-219ENST00000559822 GOLGA6L4A6NEF3 574 aa12.95□□□□□ -0.34
SPG11-219ENST00000559822 SCAMP3O14828 347 aaKnown RBP12.95□□□□□ -0.34
SPG11-219ENST00000559822 CETN3O15182 167 aa12.95□□□□□ -0.34
SPG11-219ENST00000559822 HOXC11O43248 304 aaPredicted RBP12.95□□□□□ -0.34
SPG11-219ENST00000559822 CILPO75339 1184 aa12.95□□□□□ -0.34
SPG11-219ENST00000559822 EPB41P11171 864 aaKnown RBP12.95□□□□□ -0.34
SPG11-219ENST00000559822 PSEN1P49768 467 aa12.95□□□□□ -0.34
SPG11-219ENST00000559822 ANO7Q6IWH7 933 aa12.95□□□□□ -0.34
SPG11-219ENST00000559822 KLHDC10Q6PID8 442 aa12.95□□□□□ -0.34
SPG11-219ENST00000559822 CLEC20AQ6ZU45 233 aa12.95□□□□□ -0.34
SPG11-219ENST00000559822 RASSF3Q86WH2 238 aa12.95□□□□□ -0.34
SPG11-219ENST00000559822 CCDC33Q8N5R6 958 aa12.95□□□□□ -0.34
SPG11-219ENST00000559822 KCNV2Q8TDN2 545 aa12.95□□□□□ -0.34
SPG11-219ENST00000559822 CDK5RAP1Q96SZ6 601 aaKnown RBP12.95□□□□□ -0.34
SPG11-219ENST00000559822 GTPBP4Q9BZE4 634 aaKnown RBP12.95□□□□□ -0.34
SPG11-219ENST00000559822 DUSP15Q9H1R2 295 aaPredicted RBP12.95□□□□□ -0.34
SPG11-219ENST00000559822 FAM124BQ9H5Z6 455 aaPredicted RBP12.95□□□□□ -0.34
SPG11-219ENST00000559822 MMRN2Q9H8L6 949 aa12.95□□□□□ -0.34
SPG11-219ENST00000559822 POLMQ9NP87 494 aaPredicted RBP12.95□□□□□ -0.34
SPG11-219ENST00000559822 CYLDQ9NQC7 956 aa12.95□□□□□ -0.34
SPG11-219ENST00000559822 SPHK2Q9NRA0 654 aa12.95□□□□□ -0.34
SPG11-219ENST00000559822 DEC1Q9P2X7 70 aa12.95□□□□□ -0.34
SPG11-219ENST00000559822 EML5Q05BV3 1969 aa12.94□□□□□ -0.34
SPG11-219ENST00000559822 GDF9O60383 454 aa12.94□□□□□ -0.34
SPG11-219ENST00000559822 BEST1O76090 585 aa12.94□□□□□ -0.34
SPG11-219ENST00000559822 KLF8O95600 359 aaPredicted RBP12.94□□□□□ -0.34
SPG11-219ENST00000559822 IRF1P10914 325 aa12.94□□□□□ -0.34
SPG11-219ENST00000559822 CD58P19256 250 aa12.94□□□□□ -0.34
SPG11-219ENST00000559822 ACO1P21399 889 aaKnown RBP12.94□□□□□ -0.34
SPG11-219ENST00000559822 SLC6A11P48066 632 aa12.94□□□□□ -0.34
SPG11-219ENST00000559822 MXI1P50539 228 aa12.94□□□□□ -0.34
SPG11-219ENST00000559822 SLC8A3P57103 927 aa12.94□□□□□ -0.34
SPG11-219ENST00000559822 CREB5Q02930 508 aa12.94□□□□□ -0.34
SPG11-219ENST00000559822 KDSRQ06136 332 aa12.94□□□□□ -0.34
SPG11-219ENST00000559822 PPP3CAQ08209 521 aa12.94□□□□□ -0.34
SPG11-219ENST00000559822 BYSLQ13895 437 aaKnown RBP12.94□□□□□ -0.34
SPG11-219ENST00000559822 SF3A2Q15428 464 aaKnown RBP12.94□□□□□ -0.34
SPG11-219ENST00000559822 ANO4Q32M45 955 aa12.94□□□□□ -0.34
SPG11-219ENST00000559822 ZCWPW2Q504Y3 356 aa12.94□□□□□ -0.34
SPG11-219ENST00000559822 PPM1JQ5JR12 505 aa12.94□□□□□ -0.34
SPG11-219ENST00000559822 PLA2G2CQ5R387 149 aa12.94□□□□□ -0.34
SPG11-219ENST00000559822 HTR3DQ70Z44 454 aa12.94□□□□□ -0.34
SPG11-219ENST00000559822 BBS7Q8IWZ6 715 aa12.94□□□□□ -0.34
SPG11-219ENST00000559822 ALLCQ8N6M5 410 aa12.94□□□□□ -0.34
SPG11-219ENST00000559822 IL17RCQ8NAC3 791 aa12.94□□□□□ -0.34
SPG11-219ENST00000559822 TXNDC5Q8NBS9 432 aaKnown RBP12.94□□□□□ -0.34
SPG11-219ENST00000559822 FBXL13Q8NEE6 735 aa12.94□□□□□ -0.34
SPG11-219ENST00000559822 WHAMMQ8TF30 809 aa12.94□□□□□ -0.34
SPG11-219ENST00000559822 CHAMP1Q96JM3 812 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms