RNA–Protein interactions for RNA: ENST00000558739.1

SMAD3-206, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-206ENST00000558739 IGSF5Q9NSI5 407 aa12.7□□□□□ -0.38
SMAD3-206ENST00000558739 DDX43Q9NXZ2 648 aaKnown RBP12.7□□□□□ -0.38
SMAD3-206ENST00000558739 CPSF3Q9UKF6 684 aaKnown RBP12.7□□□□□ -0.38
SMAD3-206ENST00000558739 NFE2L3Q9Y4A8 694 aa12.7□□□□□ -0.38
SMAD3-206ENST00000558739 CKAP5Q14008 2032 aa12.7□□□□□ -0.38
SMAD3-206ENST00000558739 MYH10P35580 1976 aa12.7□□□□□ -0.38
SMAD3-206ENST00000558739 ICE1Q9Y2F5 2266 aa12.69□□□□□ -0.38
SMAD3-206ENST00000558739 NPHP3-ACAD11A0A0J9YXS1 232 aa12.69□□□□□ -0.38
SMAD3-206ENST00000558739 KPNA7A9QM74 516 aa12.69□□□□□ -0.38
SMAD3-206ENST00000558739 SLC9A3R1O14745 358 aaPredicted RBP12.69□□□□□ -0.38
SMAD3-206ENST00000558739 HNRNPDLO14979 420 aaKnown RBP12.69□□□□□ -0.38
SMAD3-206ENST00000558739 OGTO15294 1046 aa12.69□□□□□ -0.38
SMAD3-206ENST00000558739 HOXC11O43248 304 aaPredicted RBP12.69□□□□□ -0.38
SMAD3-206ENST00000558739 TRAK2O60296 914 aa12.69□□□□□ -0.38
SMAD3-206ENST00000558739 ABL1P00519 1130 aa12.69□□□□□ -0.38
SMAD3-206ENST00000558739 TPMTP51580 245 aa12.69□□□□□ -0.38
SMAD3-206ENST00000558739 WNT7BP56706 349 aa12.69□□□□□ -0.38
SMAD3-206ENST00000558739 PSMC1P62191 440 aaKnown RBP12.69□□□□□ -0.38
SMAD3-206ENST00000558739 RHDQ02161 417 aa12.69□□□□□ -0.38
SMAD3-206ENST00000558739 ZNF174Q15697 407 aa12.69□□□□□ -0.38
SMAD3-206ENST00000558739 ANO4Q32M45 955 aa12.69□□□□□ -0.38
SMAD3-206ENST00000558739 TBC1D25Q3MII6 688 aa12.69□□□□□ -0.38
SMAD3-206ENST00000558739 CFAP221Q4G0U5 840 aa12.69□□□□□ -0.38
SMAD3-206ENST00000558739 BMP2KLQ5H9B9 411 aa12.69□□□□□ -0.38
SMAD3-206ENST00000558739 HAUS3Q68CZ6 603 aa12.69□□□□□ -0.38
SMAD3-206ENST00000558739 KCNV2Q8TDN2 545 aa12.69□□□□□ -0.38
SMAD3-206ENST00000558739 SPIRE2Q8WWL2 714 aa12.69□□□□□ -0.38
SMAD3-206ENST00000558739 P2RY11Q96G91 374 aa12.69□□□□□ -0.38
SMAD3-206ENST00000558739 NTPCRQ9BSD7 190 aaKnown RBP12.69□□□□□ -0.38
SMAD3-206ENST00000558739 NRSN2Q9GZP1 204 aa12.69□□□□□ -0.38
SMAD3-206ENST00000558739 ZSWIM6Q9HCJ5 1215 aa12.69□□□□□ -0.38
SMAD3-206ENST00000558739 DPP3Q9NY33 737 aa12.69□□□□□ -0.38
SMAD3-206ENST00000558739 NXF1Q9UBU9 619 aaKnown RBP12.69□□□□□ -0.38
SMAD3-206ENST00000558739 IL17BQ9UHF5 180 aa12.69□□□□□ -0.38
SMAD3-206ENST00000558739 ANKRD6Q9Y2G4 727 aa12.69□□□□□ -0.38
SMAD3-206ENST00000558739 STARD13Q9Y3M8 1113 aa12.69□□□□□ -0.38
SMAD3-206ENST00000558739 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.69□□□□□ -0.38
SMAD3-206ENST00000558739 PLXNA2O75051 1894 aa12.69□□□□□ -0.38
SMAD3-206ENST00000558739 METTL12A8MUP2 240 aa12.68□□□□□ -0.38
SMAD3-206ENST00000558739 ZBTB24O43167 697 aaPredicted RBP12.68□□□□□ -0.38
SMAD3-206ENST00000558739 PCDHGA12O60330 932 aa12.68□□□□□ -0.38
SMAD3-206ENST00000558739 CDKL5O76039 1030 aa12.68□□□□□ -0.38
SMAD3-206ENST00000558739 MBL2P11226 248 aaPredicted RBP12.68□□□□□ -0.38
SMAD3-206ENST00000558739 PLS3P13797 630 aa12.68□□□□□ -0.38
SMAD3-206ENST00000558739 PSMA5P28066 241 aa12.68□□□□□ -0.38
SMAD3-206ENST00000558739 CDC25AP30304 524 aa12.68□□□□□ -0.38
SMAD3-206ENST00000558739 ADSSP30520 456 aa12.68□□□□□ -0.38
SMAD3-206ENST00000558739 ACADVLP49748 655 aa12.68□□□□□ -0.38
SMAD3-206ENST00000558739 ACOT2P49753 483 aa12.68□□□□□ -0.38
SMAD3-206ENST00000558739 LIG4P49917 911 aa12.68□□□□□ -0.38
SMAD3-206ENST00000558739 CCT8P50990 548 aa12.68□□□□□ -0.38
SMAD3-206ENST00000558739 AFF3P51826 1226 aaKnown RBP12.68□□□□□ -0.38
SMAD3-206ENST00000558739 NFKB2Q00653 900 aa12.68□□□□□ -0.38
SMAD3-206ENST00000558739 GAD2Q05329 585 aa12.68□□□□□ -0.38
SMAD3-206ENST00000558739 SUZ12Q15022 739 aaKnown RBP12.68□□□□□ -0.38
SMAD3-206ENST00000558739 PKDCCQ504Y2 493 aa12.68□□□□□ -0.38
SMAD3-206ENST00000558739 PRAMEF14Q5SWL7 426 aa12.68□□□□□ -0.38
SMAD3-206ENST00000558739 KIAA1614Q5VZ46 1190 aa12.68□□□□□ -0.38
SMAD3-206ENST00000558739 GRAMD4Q6IC98 578 aa12.68□□□□□ -0.38
SMAD3-206ENST00000558739 FBXL19Q6PCT2 694 aa12.68□□□□□ -0.38
SMAD3-206ENST00000558739 FAM124AQ86V42 546 aa12.68□□□□□ -0.38
SMAD3-206ENST00000558739 SPATA2LQ8IUW3 424 aaPredicted RBP12.68□□□□□ -0.38
SMAD3-206ENST00000558739 CADM4Q8NFZ8 388 aa12.68□□□□□ -0.38
SMAD3-206ENST00000558739 SNX29Q8TEQ0 813 aa12.68□□□□□ -0.38
SMAD3-206ENST00000558739 MYLPFQ96A32 169 aa12.68□□□□□ -0.38
SMAD3-206ENST00000558739 WBP1Q96G27 269 aa12.68□□□□□ -0.38
SMAD3-206ENST00000558739 MSTO1Q9BUK6 570 aa12.68□□□□□ -0.38
SMAD3-206ENST00000558739 IKZF4Q9H2S9 585 aa12.68□□□□□ -0.38
SMAD3-206ENST00000558739 C6orf106Q9H6K1 298 aaPredicted RBP12.68□□□□□ -0.38
SMAD3-206ENST00000558739 BRMS1Q9HCU9 246 aa12.68□□□□□ -0.38
SMAD3-206ENST00000558739 TMEM30AQ9NV96 361 aa12.68□□□□□ -0.38
SMAD3-206ENST00000558739 DNAJC17Q9NVM6 304 aaKnown RBP12.68□□□□□ -0.38
SMAD3-206ENST00000558739 TRPM5Q9NZQ8 1165 aa12.68□□□□□ -0.38
SMAD3-206ENST00000558739 CRYBG3Q68DQ2 2970 aa12.68□□□□□ -0.38
SMAD3-206ENST00000558739 SETD2Q9BYW2 2564 aaPredicted RBP12.67□□□□□ -0.38
SMAD3-206ENST00000558739 A0A0B4J269 797 aa12.67□□□□□ -0.38
SMAD3-206ENST00000558739 ENC1O14682 589 aa12.67□□□□□ -0.38
SMAD3-206ENST00000558739 CDC45O75419 566 aa12.67□□□□□ -0.38
SMAD3-206ENST00000558739 RFPL3O75679 317 aa12.67□□□□□ -0.38
SMAD3-206ENST00000558739 BDNFP23560 247 aa12.67□□□□□ -0.38
SMAD3-206ENST00000558739 PDE6CP51160 858 aa12.67□□□□□ -0.38
SMAD3-206ENST00000558739 CACNA2D1P54289 1103 aa12.67□□□□□ -0.38
SMAD3-206ENST00000558739 TMPRSS3P57727 454 aa12.67□□□□□ -0.38
SMAD3-206ENST00000558739 SV2CQ496J9 727 aa12.67□□□□□ -0.38
SMAD3-206ENST00000558739 BTBD8Q5XKL5 378 aa12.67□□□□□ -0.38
SMAD3-206ENST00000558739 MED8Q96G25 268 aa12.67□□□□□ -0.38
SMAD3-206ENST00000558739 ACBD6Q9BR61 282 aa12.67□□□□□ -0.38
SMAD3-206ENST00000558739 TTLL2Q9BWV7 592 aa12.67□□□□□ -0.38
SMAD3-206ENST00000558739 TM9SF3Q9HD45 589 aa12.67□□□□□ -0.38
SMAD3-206ENST00000558739 SPHK2Q9NRA0 654 aa12.67□□□□□ -0.38
SMAD3-206ENST00000558739 LRWD1Q9UFC0 647 aa12.67□□□□□ -0.38
SMAD3-206ENST00000558739 E2F8A0AVK6 867 aa12.66□□□□□ -0.38
SMAD3-206ENST00000558739 NEDD8-MDP1E9PL57 170 aa12.66□□□□□ -0.38
SMAD3-206ENST00000558739 NTRK1P04629 796 aa12.66□□□□□ -0.38
SMAD3-206ENST00000558739 IRF1P10914 325 aa12.66□□□□□ -0.38
SMAD3-206ENST00000558739 MUTP22033 750 aa12.66□□□□□ -0.38
SMAD3-206ENST00000558739 PAX3P23760 479 aa12.66□□□□□ -0.38
SMAD3-206ENST00000558739 POLR2BP30876 1174 aaKnown RBP12.66□□□□□ -0.38
SMAD3-206ENST00000558739 IFRD2Q12894 506 aaPredicted RBP12.66□□□□□ -0.38
SMAD3-206ENST00000558739 TAF10Q12962 218 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms