RNA–Protein interactions for RNA: ENST00000558218.5

USP3-207, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-207ENST00000558218 IRX2Q9BZI1 471 aaPredicted RBP10.71□□□□□ -0.69
USP3-207ENST00000558218 UBXN6Q9BZV1 441 aa10.71□□□□□ -0.69
USP3-207ENST00000558218 NIF3L1Q9GZT8 377 aa10.71□□□□□ -0.69
USP3-207ENST00000558218 RNF38Q9H0F5 515 aa10.71□□□□□ -0.69
USP3-207ENST00000558218 EPC1Q9H2F5 836 aa10.71□□□□□ -0.69
USP3-207ENST00000558218 METTL14Q9HCE5 456 aaKnown RBP10.71□□□□□ -0.69
USP3-207ENST00000558218 RAB20Q9NX57 234 aa10.71□□□□□ -0.69
USP3-207ENST00000558218 COQ4Q9Y3A0 265 aa10.71□□□□□ -0.69
USP3-207ENST00000558218 COL4A3Q01955 1670 aa10.7□□□□□ -0.7
USP3-207ENST00000558218 E2F8A0AVK6 867 aa10.7□□□□□ -0.7
USP3-207ENST00000558218 OTOL1A6NHN0 477 aaPredicted RBP10.7□□□□□ -0.7
USP3-207ENST00000558218 LEFTY2O00292 366 aa10.7□□□□□ -0.7
USP3-207ENST00000558218 PSMA7O14818 248 aa10.7□□□□□ -0.7
USP3-207ENST00000558218 PMM2O15305 246 aa10.7□□□□□ -0.7
USP3-207ENST00000558218 CILPO75339 1184 aa10.7□□□□□ -0.7
USP3-207ENST00000558218 AP1G2O75843 785 aa10.7□□□□□ -0.7
USP3-207ENST00000558218 CLSTN1O94985 981 aa10.7□□□□□ -0.7
USP3-207ENST00000558218 RAP1GAPP47736 663 aa10.7□□□□□ -0.7
USP3-207ENST00000558218 CACNA2D1P54289 1103 aa10.7□□□□□ -0.7
USP3-207ENST00000558218 GAS6Q14393 721 aa10.7□□□□□ -0.7
USP3-207ENST00000558218 HECTD3Q5T447 861 aa10.7□□□□□ -0.7
USP3-207ENST00000558218 ANKRD40Q6AI12 368 aa10.7□□□□□ -0.7
USP3-207ENST00000558218 TRIM68Q6AZZ1 485 aa10.7□□□□□ -0.7
USP3-207ENST00000558218 FILIP1Q7Z7B0 1213 aa10.7□□□□□ -0.7
USP3-207ENST00000558218 CAMKK1Q8N5S9 505 aa10.7□□□□□ -0.7
USP3-207ENST00000558218 FAM160A2Q8N612 972 aaPredicted RBP10.7□□□□□ -0.7
USP3-207ENST00000558218 SLC2A14Q8TDB8 520 aa10.7□□□□□ -0.7
USP3-207ENST00000558218 FBXO32Q969P5 355 aa10.7□□□□□ -0.7
USP3-207ENST00000558218 THAP11Q96EK4 314 aa10.7□□□□□ -0.7
USP3-207ENST00000558218 CYFIP2Q96F07 1278 aa10.7□□□□□ -0.7
USP3-207ENST00000558218 CEP63Q96MT8 703 aa10.7□□□□□ -0.7
USP3-207ENST00000558218 TMEM30AQ9NV96 361 aa10.7□□□□□ -0.7
USP3-207ENST00000558218 A0A0A0MRY4 1105 aa10.69□□□□□ -0.7
USP3-207ENST00000558218 ABL1P00519 1130 aa10.69□□□□□ -0.7
USP3-207ENST00000558218 FAM200BP0CF97 657 aa10.69□□□□□ -0.7
USP3-207ENST00000558218 TRIM49P0CI25 452 aa10.69□□□□□ -0.7
USP3-207ENST00000558218 TRIM49CP0CI26 452 aa10.69□□□□□ -0.7
USP3-207ENST00000558218 ARSAP15289 507 aa10.69□□□□□ -0.7
USP3-207ENST00000558218 EIF2DP41214 584 aaKnown RBP10.69□□□□□ -0.7
USP3-207ENST00000558218 MXI1P50539 228 aa10.69□□□□□ -0.7
USP3-207ENST00000558218 SLC5A3P53794 718 aa10.69□□□□□ -0.7
USP3-207ENST00000558218 PREPLQ4J6C6 727 aaPredicted RBP10.69□□□□□ -0.7
USP3-207ENST00000558218 PLA2G2CQ5R387 149 aa10.69□□□□□ -0.7
USP3-207ENST00000558218 SPOPLQ6IQ16 392 aa10.69□□□□□ -0.7
USP3-207ENST00000558218 FSTL4Q6MZW2 842 aa10.69□□□□□ -0.7
USP3-207ENST00000558218 KLHDC10Q6PID8 442 aa10.69□□□□□ -0.7
USP3-207ENST00000558218 TSSK4Q6SA08 328 aa10.69□□□□□ -0.7
USP3-207ENST00000558218 SCARA5Q6ZMJ2 495 aa10.69□□□□□ -0.7
USP3-207ENST00000558218 LONP2Q86WA8 852 aa10.69□□□□□ -0.7
USP3-207ENST00000558218 SMYD4Q8IYR2 804 aaPredicted RBP10.69□□□□□ -0.7
USP3-207ENST00000558218 ZMIZ2Q8NF64 920 aa10.69□□□□□ -0.7
USP3-207ENST00000558218 SCAMP5Q8TAC9 235 aa10.69□□□□□ -0.7
USP3-207ENST00000558218 TTC8Q8TAM2 541 aa10.69□□□□□ -0.7
USP3-207ENST00000558218 RIN3Q8TB24 985 aa10.69□□□□□ -0.7
USP3-207ENST00000558218 WHAMMQ8TF30 809 aa10.69□□□□□ -0.7
USP3-207ENST00000558218 CD101Q93033 1021 aa10.69□□□□□ -0.7
USP3-207ENST00000558218 CHFRQ96EP1 664 aa10.69□□□□□ -0.7
USP3-207ENST00000558218 SMOQ99835 787 aa10.69□□□□□ -0.7
USP3-207ENST00000558218 DUSP16Q9BY84 665 aa10.69□□□□□ -0.7
USP3-207ENST00000558218 LINC00597Q9H2U6 94 aa10.69□□□□□ -0.7
USP3-207ENST00000558218 APOBEC3GQ9HC16 384 aaKnown RBP10.69□□□□□ -0.7
USP3-207ENST00000558218 TLR8Q9NR97 1041 aaKnown RBP10.69□□□□□ -0.7
USP3-207ENST00000558218 KRT82Q9NSB4 513 aa10.69□□□□□ -0.7
USP3-207ENST00000558218 ARMCX3Q9UH62 379 aaPredicted RBP10.69□□□□□ -0.7
USP3-207ENST00000558218 CHORDC1Q9UHD1 332 aaPredicted RBP10.69□□□□□ -0.7
USP3-207ENST00000558218 KIAA1257Q9ULG3 409 aa10.69□□□□□ -0.7
USP3-207ENST00000558218 SCML2Q9UQR0 700 aa10.69□□□□□ -0.7
USP3-207ENST00000558218 WNT6Q9Y6F9 365 aa10.69□□□□□ -0.7
USP3-207ENST00000558218 EP300Q09472 2414 aaPredicted RBP10.69□□□□□ -0.7
USP3-207ENST00000558218 MYH10P35580 1976 aa10.68□□□□□ -0.7
USP3-207ENST00000558218 OTOGLQ3ZCN5 2332 aa10.68□□□□□ -0.7
USP3-207ENST00000558218 BICDL2A1A5D9 508 aa10.68□□□□□ -0.7
USP3-207ENST00000558218 K7ESF4 209 aa10.68□□□□□ -0.7
USP3-207ENST00000558218 COCHO43405 550 aa10.68□□□□□ -0.7
USP3-207ENST00000558218 MBL2P11226 248 aaPredicted RBP10.68□□□□□ -0.7
USP3-207ENST00000558218 MAP3K7CLP57077 242 aa10.68□□□□□ -0.7
USP3-207ENST00000558218 YWHAEP62258 255 aaKnown RBP10.68□□□□□ -0.7
USP3-207ENST00000558218 ZXDBP98169 803 aa10.68□□□□□ -0.7
USP3-207ENST00000558218 FOXK2Q01167 660 aa10.68□□□□□ -0.7
USP3-207ENST00000558218 SATB1Q01826 763 aa10.68□□□□□ -0.7
USP3-207ENST00000558218 CETN1Q12798 172 aa10.68□□□□□ -0.7
USP3-207ENST00000558218 BRICD5Q6PL45 260 aa10.68□□□□□ -0.7
USP3-207ENST00000558218 CLEC20AQ6ZU45 233 aa10.68□□□□□ -0.7
USP3-207ENST00000558218 TADA2BQ86TJ2 420 aa10.68□□□□□ -0.7
USP3-207ENST00000558218 C12orf29Q8N999 325 aa10.68□□□□□ -0.7
USP3-207ENST00000558218 SEMA4DQ92854 862 aa10.68□□□□□ -0.7
USP3-207ENST00000558218 TMEM176AQ96HP8 235 aa10.68□□□□□ -0.7
USP3-207ENST00000558218 CYLDQ9NQC7 956 aa10.68□□□□□ -0.7
USP3-207ENST00000558218 RBM12Q9NTZ6 932 aaKnown RBP10.68□□□□□ -0.7
USP3-207ENST00000558218 RAB23Q9ULC3 237 aa10.68□□□□□ -0.7
USP3-207ENST00000558218 CPQQ9Y646 472 aa10.68□□□□□ -0.7
USP3-207ENST00000558218 HELZP42694 1942 aaKnown RBP10.68□□□□□ -0.7
USP3-207ENST00000558218 HHLA1C9JL84 531 aa10.67□□□□□ -0.7
USP3-207ENST00000558218 P4HA2O15460 535 aa10.67□□□□□ -0.7
USP3-207ENST00000558218 FOXD2O60548 495 aaPredicted RBP10.67□□□□□ -0.7
USP3-207ENST00000558218 LRP3O75074 770 aa10.67□□□□□ -0.7
USP3-207ENST00000558218 BEST1O76090 585 aa10.67□□□□□ -0.7
USP3-207ENST00000558218 GNA14O95837 355 aa10.67□□□□□ -0.7
USP3-207ENST00000558218 ADH1CP00326 375 aa10.67□□□□□ -0.7
USP3-207ENST00000558218 CCDC130P13994 396 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms