RNA–Protein interactions for RNA: ENST00000557572.1

FOXN3-217, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-217ENST00000557572 C9orf50Q5SZB4 431 aa3.85□□□□□ -1.79
FOXN3-217ENST00000557572 INTS11Q5TA45 600 aaKnown RBP3.85□□□□□ -1.79
FOXN3-217ENST00000557572 VPS53Q5VIR6 699 aa3.85□□□□□ -1.79
FOXN3-217ENST00000557572 LMBRD2Q68DH5 695 aaPredicted RBP3.85□□□□□ -1.79
FOXN3-217ENST00000557572 ANKRD16Q6P6B7 361 aa3.85□□□□□ -1.79
FOXN3-217ENST00000557572 NPNTQ6UXI9 565 aa3.85□□□□□ -1.79
FOXN3-217ENST00000557572 ZNF804AQ7Z570 1209 aa3.85□□□□□ -1.79
FOXN3-217ENST00000557572 GALNT5Q7Z7M9 940 aa3.85□□□□□ -1.79
FOXN3-217ENST00000557572 ZGPATQ8N5A5 531 aaKnown RBP3.85□□□□□ -1.79
FOXN3-217ENST00000557572 MYCT1Q8N699 235 aa3.85□□□□□ -1.79
FOXN3-217ENST00000557572 SPATA5Q8NB90 893 aa3.85□□□□□ -1.79
FOXN3-217ENST00000557572 NAXEQ8NCW5 288 aa3.85□□□□□ -1.79
FOXN3-217ENST00000557572 IPO4Q8TEX9 1081 aaKnown RBP3.85□□□□□ -1.79
FOXN3-217ENST00000557572 CCT6BQ92526 530 aa3.85□□□□□ -1.79
FOXN3-217ENST00000557572 GCC1Q96CN9 775 aa3.85□□□□□ -1.79
FOXN3-217ENST00000557572 HVCN1Q96D96 273 aa3.85□□□□□ -1.79
FOXN3-217ENST00000557572 LMLNQ96KR4 655 aa3.85□□□□□ -1.79
FOXN3-217ENST00000557572 CCDC138Q96M89 665 aa3.85□□□□□ -1.79
FOXN3-217ENST00000557572 ASB2Q96Q27 587 aa3.85□□□□□ -1.79
FOXN3-217ENST00000557572 TLR10Q9BXR5 811 aa3.85□□□□□ -1.79
FOXN3-217ENST00000557572 PRKRIP1Q9H875 184 aaPredicted RBP3.85□□□□□ -1.79
FOXN3-217ENST00000557572 DMRT3Q9NQL9 472 aa3.85□□□□□ -1.79
FOXN3-217ENST00000557572 ACAD8Q9UKU7 415 aa3.85□□□□□ -1.79
FOXN3-217ENST00000557572 PCDHGB6Q9Y5F9 930 aa3.85□□□□□ -1.79
FOXN3-217ENST00000557572 MYBBP1AQ9BQG0 1328 aaKnown RBP3.85□□□□□ -1.79
FOXN3-217ENST00000557572 K7ENM7 598 aa3.84□□□□□ -1.79
FOXN3-217ENST00000557572 TOR1BO14657 336 aa3.84□□□□□ -1.79
FOXN3-217ENST00000557572 ZNF213O14771 459 aa3.84□□□□□ -1.79
FOXN3-217ENST00000557572 KIAA0391O15091 583 aaKnown RBP3.84□□□□□ -1.79
FOXN3-217ENST00000557572 NCAM2O15394 837 aa3.84□□□□□ -1.79
FOXN3-217ENST00000557572 PQBP1O60828 265 aaKnown RBP3.84□□□□□ -1.79
FOXN3-217ENST00000557572 SOAT2O75908 522 aa3.84□□□□□ -1.79
FOXN3-217ENST00000557572 AGFG2O95081 481 aa3.84□□□□□ -1.79
FOXN3-217ENST00000557572 IL33O95760 270 aa3.84□□□□□ -1.79
FOXN3-217ENST00000557572 HSD3B1P14060 373 aa3.84□□□□□ -1.79
FOXN3-217ENST00000557572 PCSK6P29122 969 aa3.84□□□□□ -1.79
FOXN3-217ENST00000557572 RAD52P43351 418 aa3.84□□□□□ -1.79
FOXN3-217ENST00000557572 ROR1Q01973 937 aa3.84□□□□□ -1.79
FOXN3-217ENST00000557572 WASHC5Q12768 1159 aa3.84□□□□□ -1.79
FOXN3-217ENST00000557572 KLF1Q13351 362 aaPredicted RBP3.84□□□□□ -1.79
FOXN3-217ENST00000557572 RETSATQ6NUM9 610 aa3.84□□□□□ -1.79
FOXN3-217ENST00000557572 TLDC1Q6P9B6 456 aa3.84□□□□□ -1.79
FOXN3-217ENST00000557572 CASC1Q6TDU7 716 aa3.84□□□□□ -1.79
FOXN3-217ENST00000557572 ZNF551Q7Z340 670 aaPredicted RBP3.84□□□□□ -1.79
FOXN3-217ENST00000557572 CATIPQ7Z7H3 387 aa3.84□□□□□ -1.79
FOXN3-217ENST00000557572 SNX32Q86XE0 403 aa3.84□□□□□ -1.79
FOXN3-217ENST00000557572 MYLK4Q86YV6 388 aaPredicted RBP3.84□□□□□ -1.79
FOXN3-217ENST00000557572 CFAP52Q8N1V2 620 aa3.84□□□□□ -1.79
FOXN3-217ENST00000557572 DCBLD1Q8N8Z6 715 aa3.84□□□□□ -1.79
FOXN3-217ENST00000557572 FAM156AQ8NDB6 213 aa3.84□□□□□ -1.79
FOXN3-217ENST00000557572 POC1BQ8TC44 478 aa3.84□□□□□ -1.79
FOXN3-217ENST00000557572 ZC3H10Q96K80 434 aaKnown RBP3.84□□□□□ -1.79
FOXN3-217ENST00000557572 MYCBPQ99417 103 aaPredicted RBP3.84□□□□□ -1.79
FOXN3-217ENST00000557572 ISCA1Q9BUE6 129 aa3.84□□□□□ -1.79
FOXN3-217ENST00000557572 APOL5Q9BWW9 433 aa3.84□□□□□ -1.79
FOXN3-217ENST00000557572 RASSF1Q9NS23 344 aa3.84□□□□□ -1.79
FOXN3-217ENST00000557572 ANKEF1Q9NU02 776 aa3.84□□□□□ -1.79
FOXN3-217ENST00000557572 PDP2Q9P2J9 529 aa3.84□□□□□ -1.79
FOXN3-217ENST00000557572 GJD2Q9UKL4 321 aa3.84□□□□□ -1.79
FOXN3-217ENST00000557572 POLHQ9Y253 713 aa3.84□□□□□ -1.79
FOXN3-217ENST00000557572 TTC3P53804 2025 aa3.83□□□□□ -1.8
FOXN3-217ENST00000557572 GOLIM4O00461 696 aa3.83□□□□□ -1.8
FOXN3-217ENST00000557572 SLC43A1O75387 559 aa3.83□□□□□ -1.8
FOXN3-217ENST00000557572 BAIAP3O94812 1187 aa3.83□□□□□ -1.8
FOXN3-217ENST00000557572 NXPH3O95157 252 aa3.83□□□□□ -1.8
FOXN3-217ENST00000557572 ZBED1O96006 694 aa3.83□□□□□ -1.8
FOXN3-217ENST00000557572 HSPA6P17066 643 aa3.83□□□□□ -1.8
FOXN3-217ENST00000557572 IL1R2P27930 398 aa3.83□□□□□ -1.8
FOXN3-217ENST00000557572 ATICP31939 592 aa3.83□□□□□ -1.8
FOXN3-217ENST00000557572 NPTX2P47972 431 aa3.83□□□□□ -1.8
FOXN3-217ENST00000557572 FXR1P51114 621 aaKnown RBP eCLIP3.83□□□□□ -1.8
FOXN3-217ENST00000557572 CCT2P78371 535 aaKnown RBP3.83□□□□□ -1.8
FOXN3-217ENST00000557572 NEXNQ0ZGT2 675 aa3.83□□□□□ -1.8
FOXN3-217ENST00000557572 PDCD2Q16342 344 aaPredicted RBP3.83□□□□□ -1.8
FOXN3-217ENST00000557572 AARS2Q5JTZ9 985 aaKnown RBP3.83□□□□□ -1.8
FOXN3-217ENST00000557572 IFIT1BQ5T764 474 aaKnown RBP3.83□□□□□ -1.8
FOXN3-217ENST00000557572 TEDDM1Q5T9Z0 273 aa3.83□□□□□ -1.8
FOXN3-217ENST00000557572 UTP14CQ5TAP6 766 aaKnown RBP3.83□□□□□ -1.8
FOXN3-217ENST00000557572 TTLL5Q6EMB2 1281 aa3.83□□□□□ -1.8
FOXN3-217ENST00000557572 PGM2L1Q6PCE3 622 aa3.83□□□□□ -1.8
FOXN3-217ENST00000557572 CYP26C1Q6V0L0 522 aa3.83□□□□□ -1.8
FOXN3-217ENST00000557572 ZNF365Q70YC5 407 aa3.83□□□□□ -1.8
FOXN3-217ENST00000557572 OVCH2Q7RTZ1 564 aa3.83□□□□□ -1.8
FOXN3-217ENST00000557572 CMIPQ8IY22 773 aa3.83□□□□□ -1.8
FOXN3-217ENST00000557572 NDUFAF2Q8N183 169 aa3.83□□□□□ -1.8
FOXN3-217ENST00000557572 ZNF713Q8N859 430 aaPredicted RBP3.83□□□□□ -1.8
FOXN3-217ENST00000557572 LSMEM1Q8N8F7 131 aa3.83□□□□□ -1.8
FOXN3-217ENST00000557572 ZBTB34Q8NCN2 500 aa3.83□□□□□ -1.8
FOXN3-217ENST00000557572 PPP1R35Q8TAP8 253 aa3.83□□□□□ -1.8
FOXN3-217ENST00000557572 DEPTORQ8TB45 409 aa3.83□□□□□ -1.8
FOXN3-217ENST00000557572 CCHCR1Q8TD31 782 aa3.83□□□□□ -1.8
FOXN3-217ENST00000557572 ZBTB10Q96DT7 871 aa3.83□□□□□ -1.8
FOXN3-217ENST00000557572 AHCYL2Q96HN2 611 aaKnown RBP3.83□□□□□ -1.8
FOXN3-217ENST00000557572 CDHR1Q96JP9 859 aa3.83□□□□□ -1.8
FOXN3-217ENST00000557572 KLHL32Q96NJ5 620 aa3.83□□□□□ -1.8
FOXN3-217ENST00000557572 NUP88Q99567 741 aaPredicted RBP3.83□□□□□ -1.8
FOXN3-217ENST00000557572 BARD1Q99728 777 aaKnown RBP3.83□□□□□ -1.8
FOXN3-217ENST00000557572 ACO2Q99798 780 aaKnown RBP3.83□□□□□ -1.8
FOXN3-217ENST00000557572 ZPBPQ9BS86 351 aa3.83□□□□□ -1.8
FOXN3-217ENST00000557572 AP1M1Q9BXS5 423 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms