RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 MESP2Q0VG99 397 aa16.81■□□□□ 0.28
TUBB3-213ENST00000557262 ORC1Q13415 861 aa16.81■□□□□ 0.28
TUBB3-213ENST00000557262 NFIL3Q16649 462 aa16.81■□□□□ 0.28
TUBB3-213ENST00000557262 EMC10Q5UCC4 262 aa16.81■□□□□ 0.28
TUBB3-213ENST00000557262 BTBD8Q5XKL5 378 aa16.81■□□□□ 0.28
TUBB3-213ENST00000557262 SPOPLQ6IQ16 392 aa16.81■□□□□ 0.28
TUBB3-213ENST00000557262 ANO7Q6IWH7 933 aa16.81■□□□□ 0.28
TUBB3-213ENST00000557262 C12orf40Q86WS4 652 aa16.81■□□□□ 0.28
TUBB3-213ENST00000557262 ALLCQ8N6M5 410 aa16.81■□□□□ 0.28
TUBB3-213ENST00000557262 C12orf29Q8N999 325 aa16.81■□□□□ 0.28
TUBB3-213ENST00000557262 IL17RCQ8NAC3 791 aa16.81■□□□□ 0.28
TUBB3-213ENST00000557262 CHAMP1Q96JM3 812 aa16.81■□□□□ 0.28
TUBB3-213ENST00000557262 CNOT6LQ96LI5 555 aaKnown RBP16.81■□□□□ 0.28
TUBB3-213ENST00000557262 HNRNPABQ99729 332 aaKnown RBP16.81■□□□□ 0.28
TUBB3-213ENST00000557262 TPSD1Q9BZJ3 242 aa16.81■□□□□ 0.28
TUBB3-213ENST00000557262 NACA2Q9H009 215 aa16.81■□□□□ 0.28
TUBB3-213ENST00000557262 SMOC1Q9H4F8 434 aa16.81■□□□□ 0.28
TUBB3-213ENST00000557262 ARHGEF4Q9NR80 690 aa16.81■□□□□ 0.28
TUBB3-213ENST00000557262 TLR8Q9NR97 1041 aaKnown RBP16.81■□□□□ 0.28
TUBB3-213ENST00000557262 RXFP3Q9NSD7 469 aa16.81■□□□□ 0.28
TUBB3-213ENST00000557262 HMGXB4Q9UGU5 601 aa16.81■□□□□ 0.28
TUBB3-213ENST00000557262 BCLAF3A2AJT9 711 aaKnown RBP16.8■□□□□ 0.28
TUBB3-213ENST00000557262 ALDH1A2O94788 518 aa16.8■□□□□ 0.28
TUBB3-213ENST00000557262 KLF8O95600 359 aaPredicted RBP16.8■□□□□ 0.28
TUBB3-213ENST00000557262 CAVIN2O95810 425 aa16.8■□□□□ 0.28
TUBB3-213ENST00000557262 PRR29P0C7W0 189 aa16.8■□□□□ 0.28
TUBB3-213ENST00000557262 NR2F2P24468 414 aa16.8■□□□□ 0.28
TUBB3-213ENST00000557262 RPL13P26373 211 aaKnown RBP16.8■□□□□ 0.28
TUBB3-213ENST00000557262 KIR2DL1P43626 348 aaPredicted RBP16.8■□□□□ 0.28
TUBB3-213ENST00000557262 CREB5Q02930 508 aa16.8■□□□□ 0.28
TUBB3-213ENST00000557262 ENPEPQ07075 957 aa16.8■□□□□ 0.28
TUBB3-213ENST00000557262 DPYDQ12882 1025 aa16.8■□□□□ 0.28
TUBB3-213ENST00000557262 PREPLQ4J6C6 727 aaPredicted RBP16.8■□□□□ 0.28
TUBB3-213ENST00000557262 EOGTQ5NDL2 527 aa16.8■□□□□ 0.28
TUBB3-213ENST00000557262 STPG1Q5TH74 334 aa16.8■□□□□ 0.28
TUBB3-213ENST00000557262 TMEM92Q6UXU6 159 aa16.8■□□□□ 0.28
TUBB3-213ENST00000557262 INTS8Q75QN2 995 aaKnown RBP16.8■□□□□ 0.28
TUBB3-213ENST00000557262 SFTPA1Q8IWL2 248 aa16.8■□□□□ 0.28
TUBB3-213ENST00000557262 BBS7Q8IWZ6 715 aa16.8■□□□□ 0.28
TUBB3-213ENST00000557262 TXNDC5Q8NBS9 432 aaKnown RBP16.8■□□□□ 0.28
TUBB3-213ENST00000557262 CYFIP2Q96F07 1278 aa16.8■□□□□ 0.28
TUBB3-213ENST00000557262 CNTNAP3BQ96NU0 1288 aa16.8■□□□□ 0.28
TUBB3-213ENST00000557262 CNTNAP3Q9BZ76 1288 aa16.8■□□□□ 0.28
TUBB3-213ENST00000557262 IMPG2Q9BZV3 1241 aa16.8■□□□□ 0.28
TUBB3-213ENST00000557262 CYP3A43Q9HB55 503 aa16.8■□□□□ 0.28
TUBB3-213ENST00000557262 SPHK2Q9NRA0 654 aa16.8■□□□□ 0.28
TUBB3-213ENST00000557262 FAM49BQ9NUQ9 324 aa16.8■□□□□ 0.28
TUBB3-213ENST00000557262 MAPK8IP1Q9UQF2 711 aa16.8■□□□□ 0.28
TUBB3-213ENST00000557262 MYO16Q9Y6X6 1858 aa16.8■□□□□ 0.28
TUBB3-213ENST00000557262 TPRP12270 2363 aaKnown RBP16.79■□□□□ 0.28
TUBB3-213ENST00000557262 A0A1W2PQ27 194 aa16.79■□□□□ 0.28
TUBB3-213ENST00000557262 A0A1W2PQ64 194 aa16.79■□□□□ 0.28
TUBB3-213ENST00000557262 A0A1W2PQD8 194 aa16.79■□□□□ 0.28
TUBB3-213ENST00000557262 TBC1D3BA6NDS4 549 aa16.79■□□□□ 0.28
TUBB3-213ENST00000557262 TLR5O60602 858 aa16.79■□□□□ 0.28
TUBB3-213ENST00000557262 FAM200BP0CF97 657 aa16.79■□□□□ 0.28
TUBB3-213ENST00000557262 KRT13P13646 458 aa16.79■□□□□ 0.28
TUBB3-213ENST00000557262 ADORA2BP29275 332 aa16.79■□□□□ 0.28
TUBB3-213ENST00000557262 PSMC2P35998 433 aaKnown RBP16.79■□□□□ 0.28
TUBB3-213ENST00000557262 ATP5C1P36542 298 aaKnown RBP16.79■□□□□ 0.28
TUBB3-213ENST00000557262 GCLMP48507 274 aa16.79■□□□□ 0.28
TUBB3-213ENST00000557262 PGFP49763 221 aa16.79■□□□□ 0.28
TUBB3-213ENST00000557262 INCA1Q0VD86 236 aa16.79■□□□□ 0.28
TUBB3-213ENST00000557262 ADAM9Q13443 819 aa16.79■□□□□ 0.28
TUBB3-213ENST00000557262 PMS2CLQ68D20 193 aa16.79■□□□□ 0.28
TUBB3-213ENST00000557262 KRBA2Q6ZNG9 492 aa16.79■□□□□ 0.28
TUBB3-213ENST00000557262 NUDT18Q6ZVK8 323 aa16.79■□□□□ 0.28
TUBB3-213ENST00000557262 HTR3DQ70Z44 454 aa16.79■□□□□ 0.28
TUBB3-213ENST00000557262 TTC30AQ86WT1 665 aa16.79■□□□□ 0.28
TUBB3-213ENST00000557262 PHTF2Q8N3S3 785 aa16.79■□□□□ 0.28
TUBB3-213ENST00000557262 GUF1Q8N442 669 aaKnown RBP16.79■□□□□ 0.28
TUBB3-213ENST00000557262 NAT16Q8N8M0 369 aa16.79■□□□□ 0.28
TUBB3-213ENST00000557262 MDGA1Q8NFP4 955 aa16.79■□□□□ 0.28
TUBB3-213ENST00000557262 KCNV2Q8TDN2 545 aa16.79■□□□□ 0.28
TUBB3-213ENST00000557262 WBP2Q969T9 261 aa16.79■□□□□ 0.28
TUBB3-213ENST00000557262 NT5C1AQ9BXI3 368 aa16.79■□□□□ 0.28
TUBB3-213ENST00000557262 SCAND2PQ9GZW5 306 aaPredicted RBP16.79■□□□□ 0.28
TUBB3-213ENST00000557262 POLMQ9NP87 494 aaPredicted RBP16.79■□□□□ 0.28
TUBB3-213ENST00000557262 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.79■□□□□ 0.28
TUBB3-213ENST00000557262 DEC1Q9P2X7 70 aa16.79■□□□□ 0.28
TUBB3-213ENST00000557262 ATP6V1DQ9Y5K8 247 aa16.79■□□□□ 0.28
TUBB3-213ENST00000557262 LAMA1P25391 3075 aa16.78■□□□□ 0.28
TUBB3-213ENST00000557262 KIAA1549LQ6ZVL6 1849 aa16.78■□□□□ 0.28
TUBB3-213ENST00000557262 HHLA1C9JL84 531 aa16.78■□□□□ 0.28
TUBB3-213ENST00000557262 SGK1O00141 431 aa16.78■□□□□ 0.28
TUBB3-213ENST00000557262 HOXC11O43248 304 aaPredicted RBP16.78■□□□□ 0.28
TUBB3-213ENST00000557262 IRF1P10914 325 aa16.78■□□□□ 0.28
TUBB3-213ENST00000557262 CHRM1P11229 460 aaPredicted RBP16.78■□□□□ 0.28
TUBB3-213ENST00000557262 HNRNPLP14866 589 aaKnown RBP eCLIP16.78■□□□□ 0.28
TUBB3-213ENST00000557262 MCCD1P59942 119 aaPredicted RBP16.78■□□□□ 0.28
TUBB3-213ENST00000557262 KDSRQ06136 332 aa16.78■□□□□ 0.28
TUBB3-213ENST00000557262 PPP3CAQ08209 521 aa16.78■□□□□ 0.28
TUBB3-213ENST00000557262 ANO4Q32M45 955 aa16.78■□□□□ 0.28
TUBB3-213ENST00000557262 CLEC20AQ6ZU45 233 aa16.78■□□□□ 0.28
TUBB3-213ENST00000557262 TMEM25Q86YD3 366 aa16.78■□□□□ 0.28
TUBB3-213ENST00000557262 ETFBKMTQ8IXQ9 262 aa16.78■□□□□ 0.28
TUBB3-213ENST00000557262 FAM186BQ8IYM0 893 aa16.78■□□□□ 0.28
TUBB3-213ENST00000557262 CCDC150Q8NCX0 1101 aa16.78■□□□□ 0.28
TUBB3-213ENST00000557262 OLIG1Q8TAK6 271 aa16.78■□□□□ 0.28
TUBB3-213ENST00000557262 TAS1R2Q8TE23 839 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms