RNA–Protein interactions for RNA: ENST00000556412.4

VIPAS39-208, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-208ENST00000556412 YJEFN3A6XGL0 299 aa14.74□□□□□ -0.05
VIPAS39-208ENST00000556412 E7ENQ6 273 aa14.74□□□□□ -0.05
VIPAS39-208ENST00000556412 FTLP02792 175 aaPredicted RBP14.74□□□□□ -0.05
VIPAS39-208ENST00000556412 RPL34P49207 117 aaKnown RBP14.74□□□□□ -0.05
VIPAS39-208ENST00000556412 CDK17Q00537 523 aa14.74□□□□□ -0.05
VIPAS39-208ENST00000556412 MAPK8IP2Q13387 824 aaPredicted RBP14.74□□□□□ -0.05
VIPAS39-208ENST00000556412 PM20D1Q6GTS8 502 aa14.74□□□□□ -0.05
VIPAS39-208ENST00000556412 MON1AQ86VX9 555 aa14.74□□□□□ -0.05
VIPAS39-208ENST00000556412 ARHGAP18Q8N392 663 aa14.74□□□□□ -0.05
VIPAS39-208ENST00000556412 MAB21L3Q8N8X9 362 aa14.74□□□□□ -0.05
VIPAS39-208ENST00000556412 TTC16Q8NEE8 873 aa14.74□□□□□ -0.05
VIPAS39-208ENST00000556412 OVCA2Q8WZ82 227 aa14.74□□□□□ -0.05
VIPAS39-208ENST00000556412 EDEM1Q92611 657 aa14.74□□□□□ -0.05
VIPAS39-208ENST00000556412 MCRS1Q96EZ8 462 aa14.74□□□□□ -0.05
VIPAS39-208ENST00000556412 PIWIL1Q96J94 861 aaKnown RBP14.74□□□□□ -0.05
VIPAS39-208ENST00000556412 C2orf78A6NCI8 922 aa14.73□□□□□ -0.05
VIPAS39-208ENST00000556412 SART1O43290 800 aaKnown RBP14.73□□□□□ -0.05
VIPAS39-208ENST00000556412 MOSPD3O75425 235 aa14.73□□□□□ -0.05
VIPAS39-208ENST00000556412 GRAP2O75791 330 aa14.73□□□□□ -0.05
VIPAS39-208ENST00000556412 CALB1P05937 261 aa14.73□□□□□ -0.05
VIPAS39-208ENST00000556412 ABCB4P21439 1286 aa14.73□□□□□ -0.05
VIPAS39-208ENST00000556412 PPP3CCP48454 512 aa14.73□□□□□ -0.05
VIPAS39-208ENST00000556412 KCNQ1P51787 676 aa14.73□□□□□ -0.05
VIPAS39-208ENST00000556412 TAF5Q15542 800 aa14.73□□□□□ -0.05
VIPAS39-208ENST00000556412 SLC18A3Q16572 532 aa14.73□□□□□ -0.05
VIPAS39-208ENST00000556412 FAM102AQ5T9C2 384 aaPredicted RBP14.73□□□□□ -0.05
VIPAS39-208ENST00000556412 BTBD8Q5XKL5 378 aa14.73□□□□□ -0.05
VIPAS39-208ENST00000556412 ALKBH5Q6P6C2 394 aaKnown RBP14.73□□□□□ -0.05
VIPAS39-208ENST00000556412 TOGARAM2Q6ZUX3 1019 aa14.73□□□□□ -0.05
VIPAS39-208ENST00000556412 HFE2Q6ZVN8 426 aa14.73□□□□□ -0.05
VIPAS39-208ENST00000556412 RSRC2Q7L4I2 434 aaKnown RBP14.73□□□□□ -0.05
VIPAS39-208ENST00000556412 SCD5Q86SK9 330 aa14.73□□□□□ -0.05
VIPAS39-208ENST00000556412 XYLT1Q86Y38 959 aa14.73□□□□□ -0.05
VIPAS39-208ENST00000556412 PHF13Q86YI8 300 aaPredicted RBP14.73□□□□□ -0.05
VIPAS39-208ENST00000556412 TMTC1Q8IUR5 882 aa14.73□□□□□ -0.05
VIPAS39-208ENST00000556412 FGF13Q92913 245 aa14.73□□□□□ -0.05
VIPAS39-208ENST00000556412 CCSER2Q9H7U1 834 aa14.73□□□□□ -0.05
VIPAS39-208ENST00000556412 AVENQ9NQS1 362 aaPredicted RBP14.73□□□□□ -0.05
VIPAS39-208ENST00000556412 OSER1Q9NX31 292 aa14.73□□□□□ -0.05
VIPAS39-208ENST00000556412 NUDT5Q9UKK9 219 aa14.73□□□□□ -0.05
VIPAS39-208ENST00000556412 FAM50BQ9Y247 325 aa14.73□□□□□ -0.05
VIPAS39-208ENST00000556412 ATMINO43313 823 aaPredicted RBP14.73□□□□□ -0.05
VIPAS39-208ENST00000556412 RTN2O75298 545 aa14.73□□□□□ -0.05
VIPAS39-208ENST00000556412 GZMAP12544 262 aa14.73□□□□□ -0.05
VIPAS39-208ENST00000556412 IL9P15248 144 aa14.73□□□□□ -0.05
VIPAS39-208ENST00000556412 RNASE9P60153 205 aaKnown RBP14.73□□□□□ -0.05
VIPAS39-208ENST00000556412 C1QBPQ07021 282 aaKnown RBP14.73□□□□□ -0.05
VIPAS39-208ENST00000556412 AAK1Q2M2I8 961 aa14.73□□□□□ -0.05
VIPAS39-208ENST00000556412 PUS10Q3MIT2 529 aaKnown RBP14.73□□□□□ -0.05
VIPAS39-208ENST00000556412 HECTD3Q5T447 861 aa14.73□□□□□ -0.05
VIPAS39-208ENST00000556412 BSPRYQ5W0U4 402 aa14.73□□□□□ -0.05
VIPAS39-208ENST00000556412 PPP1R2P3Q6NXS1 205 aa14.73□□□□□ -0.05
VIPAS39-208ENST00000556412 MON1BQ7L1V2 547 aa14.73□□□□□ -0.05
VIPAS39-208ENST00000556412 BHLHA9Q7RTU4 235 aa14.73□□□□□ -0.05
VIPAS39-208ENST00000556412 NPAS3Q8IXF0 933 aa14.73□□□□□ -0.05
VIPAS39-208ENST00000556412 MCOLN2Q8IZK6 566 aa14.73□□□□□ -0.05
VIPAS39-208ENST00000556412 ST13P5Q8NFI4 369 aaPredicted RBP14.73□□□□□ -0.05
VIPAS39-208ENST00000556412 IRGQQ8WZA9 623 aa14.73□□□□□ -0.05
VIPAS39-208ENST00000556412 RPGRIP1Q96KN7 1286 aa14.73□□□□□ -0.05
VIPAS39-208ENST00000556412 STRIP2Q9ULQ0 834 aa14.73□□□□□ -0.05
VIPAS39-208ENST00000556412 CAPN9O14815 690 aa14.72□□□□□ -0.05
VIPAS39-208ENST00000556412 TLR5O60602 858 aa14.72□□□□□ -0.05
VIPAS39-208ENST00000556412 LTFP02788 710 aa14.72□□□□□ -0.05
VIPAS39-208ENST00000556412 CKMP06732 381 aa14.72□□□□□ -0.05
VIPAS39-208ENST00000556412 RALAP11233 206 aa14.72□□□□□ -0.05
VIPAS39-208ENST00000556412 RARGP13631 454 aa14.72□□□□□ -0.05
VIPAS39-208ENST00000556412 CYLC1P35663 651 aaPredicted RBP14.72□□□□□ -0.05
VIPAS39-208ENST00000556412 GABRB2P47870 512 aa14.72□□□□□ -0.05
VIPAS39-208ENST00000556412 SLC6A3Q01959 620 aa14.72□□□□□ -0.05
VIPAS39-208ENST00000556412 MTF1Q14872 753 aa14.72□□□□□ -0.05
VIPAS39-208ENST00000556412 ASTE1Q2TB18 679 aaPredicted RBP14.72□□□□□ -0.05
VIPAS39-208ENST00000556412 OLFML1Q6UWY5 402 aa14.72□□□□□ -0.05
VIPAS39-208ENST00000556412 ZDHHC17Q8IUH5 632 aa14.72□□□□□ -0.05
VIPAS39-208ENST00000556412 RNF139Q8WU17 664 aa14.72□□□□□ -0.05
VIPAS39-208ENST00000556412 ZNF653Q96CK0 615 aa14.72□□□□□ -0.05
VIPAS39-208ENST00000556412 ZSWIM3Q96MP5 696 aa14.72□□□□□ -0.05
VIPAS39-208ENST00000556412 MYADMQ96S97 322 aa14.72□□□□□ -0.05
VIPAS39-208ENST00000556412 CYP2S1Q96SQ9 504 aa14.72□□□□□ -0.05
VIPAS39-208ENST00000556412 SMG9Q9H0W8 520 aaKnown RBP14.72□□□□□ -0.05
VIPAS39-208ENST00000556412 TASP1Q9H6P5 420 aa14.72□□□□□ -0.05
VIPAS39-208ENST00000556412 MYO1AQ9UBC5 1043 aa14.72□□□□□ -0.05
VIPAS39-208ENST00000556412 CDH7Q9ULB5 785 aa14.72□□□□□ -0.05
VIPAS39-208ENST00000556412 XIRP2A4UGR9 3374 aa14.72□□□□□ -0.05
VIPAS39-208ENST00000556412 NCANO14594 1321 aa14.72□□□□□ -0.05
VIPAS39-208ENST00000556412 TRAV19A0A0A6YYK7 116 aa14.71□□□□□ -0.05
VIPAS39-208ENST00000556412 GJB6O95452 261 aa14.71□□□□□ -0.05
VIPAS39-208ENST00000556412 TBX18O95935 607 aa14.71□□□□□ -0.05
VIPAS39-208ENST00000556412 ZDHHC11BP0C7U3 371 aa14.71□□□□□ -0.05
VIPAS39-208ENST00000556412 NCAM1P13591 858 aa14.71□□□□□ -0.05
VIPAS39-208ENST00000556412 HDCP19113 662 aa14.71□□□□□ -0.05
VIPAS39-208ENST00000556412 RRM1P23921 792 aa14.71□□□□□ -0.05
VIPAS39-208ENST00000556412 AVPR1AP37288 418 aa14.71□□□□□ -0.05
VIPAS39-208ENST00000556412 PSEN1P49768 467 aa14.71□□□□□ -0.05
VIPAS39-208ENST00000556412 PTP4A2Q12974 167 aa14.71□□□□□ -0.05
VIPAS39-208ENST00000556412 SMAD2Q15796 467 aaKnown RBP14.71□□□□□ -0.05
VIPAS39-208ENST00000556412 EFHC1Q5JVL4 640 aa14.71□□□□□ -0.05
VIPAS39-208ENST00000556412 C10orf120Q5SQS8 335 aa14.71□□□□□ -0.05
VIPAS39-208ENST00000556412 DNAJC24Q6P3W2 148 aa14.71□□□□□ -0.05
VIPAS39-208ENST00000556412 OTOP3Q7RTS5 596 aa14.71□□□□□ -0.05
VIPAS39-208ENST00000556412 SCML4Q8N228 414 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms