RNA–Protein interactions for RNA: ENST00000555628.5

PRKCH-218, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-218ENST00000555628 LMBRD2Q68DH5 695 aaPredicted RBP9.76□□□□□ -0.85
PRKCH-218ENST00000555628 RHBDF2Q6PJF5 856 aa9.76□□□□□ -0.85
PRKCH-218ENST00000555628 TOGARAM2Q6ZUX3 1019 aa9.76□□□□□ -0.85
PRKCH-218ENST00000555628 TMPRSS7Q7RTY8 843 aa9.76□□□□□ -0.85
PRKCH-218ENST00000555628 NAXDQ8IW45 347 aa9.76□□□□□ -0.85
PRKCH-218ENST00000555628 CD302Q8IX05 232 aa9.76□□□□□ -0.85
PRKCH-218ENST00000555628 ADGRG2Q8IZP9 1017 aa9.76□□□□□ -0.85
PRKCH-218ENST00000555628 PDCL2Q8N4E4 241 aa9.76□□□□□ -0.85
PRKCH-218ENST00000555628 HMGB4Q8WW32 186 aa9.76□□□□□ -0.85
PRKCH-218ENST00000555628 YTHDC1Q96MU7 727 aaKnown RBP9.76□□□□□ -0.85
PRKCH-218ENST00000555628 PNMA5Q96PV4 448 aa9.76□□□□□ -0.85
PRKCH-218ENST00000555628 PYM1Q9BRP8 204 aaKnown RBP9.76□□□□□ -0.85
PRKCH-218ENST00000555628 FOXP1Q9H334 677 aaPredicted RBP9.76□□□□□ -0.85
PRKCH-218ENST00000555628 RPF1Q9H9Y2 349 aaKnown RBP9.76□□□□□ -0.85
PRKCH-218ENST00000555628 TRPC7Q9HCX4 862 aa9.76□□□□□ -0.85
PRKCH-218ENST00000555628 KIAA1522Q9P206 1035 aaPredicted RBP9.76□□□□□ -0.85
PRKCH-218ENST00000555628 UXTQ9UBK9 157 aaPredicted RBP9.76□□□□□ -0.85
PRKCH-218ENST00000555628 PCOLCE2Q9UKZ9 415 aa9.76□□□□□ -0.85
PRKCH-218ENST00000555628 L1RE1Q9UN81 338 aa9.76□□□□□ -0.85
PRKCH-218ENST00000555628 MAGED2Q9UNF1 606 aaPredicted RBP9.76□□□□□ -0.85
PRKCH-218ENST00000555628 DNM3Q9UQ16 869 aa9.76□□□□□ -0.85
PRKCH-218ENST00000555628 COL12A1Q99715 3063 aa9.76□□□□□ -0.85
PRKCH-218ENST00000555628 SHROOM3Q8TF72 1996 aa9.75□□□□□ -0.85
PRKCH-218ENST00000555628 COL6A6A6NMZ7 2263 aa9.75□□□□□ -0.85
PRKCH-218ENST00000555628 A0A1W2PQD8 194 aa9.75□□□□□ -0.85
PRKCH-218ENST00000555628 TCRBV21S2A2A0A5A6 115 aa9.75□□□□□ -0.85
PRKCH-218ENST00000555628 H3BM21 787 aa9.75□□□□□ -0.85
PRKCH-218ENST00000555628 LEFTY2O00292 366 aa9.75□□□□□ -0.85
PRKCH-218ENST00000555628 AP5Z1O43299 807 aa9.75□□□□□ -0.85
PRKCH-218ENST00000555628 HCRTO43612 131 aa9.75□□□□□ -0.85
PRKCH-218ENST00000555628 PRPF40AO75400 957 aaKnown RBP9.75□□□□□ -0.85
PRKCH-218ENST00000555628 PFKLP17858 780 aa9.75□□□□□ -0.85
PRKCH-218ENST00000555628 TRAPPC10P48553 1259 aa9.75□□□□□ -0.85
PRKCH-218ENST00000555628 TAF6P49848 677 aa9.75□□□□□ -0.85
PRKCH-218ENST00000555628 ZNF131P52739 623 aa9.75□□□□□ -0.85
PRKCH-218ENST00000555628 SLC7A9P82251 487 aa9.75□□□□□ -0.85
PRKCH-218ENST00000555628 ZNF33AQ06730 810 aa9.75□□□□□ -0.85
PRKCH-218ENST00000555628 RAD51AP2Q09MP3 1159 aa9.75□□□□□ -0.85
PRKCH-218ENST00000555628 DHCR24Q15392 516 aa9.75□□□□□ -0.85
PRKCH-218ENST00000555628 TAF12Q16514 161 aa9.75□□□□□ -0.85
PRKCH-218ENST00000555628 NFE2Q16621 373 aaPredicted RBP9.75□□□□□ -0.85
PRKCH-218ENST00000555628 EOGTQ5NDL2 527 aa9.75□□□□□ -0.85
PRKCH-218ENST00000555628 CRELD2Q6UXH1 353 aaPredicted RBP9.75□□□□□ -0.85
PRKCH-218ENST00000555628 DBX2Q6ZNG2 339 aa9.75□□□□□ -0.85
PRKCH-218ENST00000555628 LIMS2Q7Z4I7 341 aa9.75□□□□□ -0.85
PRKCH-218ENST00000555628 RABEPKQ7Z6M1 372 aa9.75□□□□□ -0.85
PRKCH-218ENST00000555628 FILIP1Q7Z7B0 1213 aa9.75□□□□□ -0.85
PRKCH-218ENST00000555628 MIB1Q86YT6 1006 aa9.75□□□□□ -0.85
PRKCH-218ENST00000555628 DCP1BQ8IZD4 617 aaKnown RBP9.75□□□□□ -0.85
PRKCH-218ENST00000555628 SYT2Q8N9I0 419 aaPredicted RBP9.75□□□□□ -0.85
PRKCH-218ENST00000555628 TTLL2Q9BWV7 592 aa9.75□□□□□ -0.85
PRKCH-218ENST00000555628 ASB7Q9H672 318 aa9.75□□□□□ -0.85
PRKCH-218ENST00000555628 POLMQ9NP87 494 aaPredicted RBP9.75□□□□□ -0.85
PRKCH-218ENST00000555628 CD93Q9NPY3 652 aa9.75□□□□□ -0.85
PRKCH-218ENST00000555628 CALCOCO1Q9P1Z2 691 aa9.75□□□□□ -0.85
PRKCH-218ENST00000555628 STYXL1Q9Y6J8 313 aa9.75□□□□□ -0.85
PRKCH-218ENST00000555628 KNTC1P50748 2209 aa9.74□□□□□ -0.85
PRKCH-218ENST00000555628 NPHP3-ACAD11A0A0J9YXS1 232 aa9.74□□□□□ -0.85
PRKCH-218ENST00000555628 KPNA7A9QM74 516 aa9.74□□□□□ -0.85
PRKCH-218ENST00000555628 TISP43B9A030 160 aa9.74□□□□□ -0.85
PRKCH-218ENST00000555628 GABRDO14764 452 aa9.74□□□□□ -0.85
PRKCH-218ENST00000555628 HNRNPDLO14979 420 aaKnown RBP9.74□□□□□ -0.85
PRKCH-218ENST00000555628 OAS1P00973 400 aaKnown RBP9.74□□□□□ -0.85
PRKCH-218ENST00000555628 PLA2G2AP14555 144 aa9.74□□□□□ -0.85
PRKCH-218ENST00000555628 RDXP35241 583 aaKnown RBP9.74□□□□□ -0.85
PRKCH-218ENST00000555628 GRIA2P42262 883 aa9.74□□□□□ -0.85
PRKCH-218ENST00000555628 MAGEA11P43364 429 aa9.74□□□□□ -0.85
PRKCH-218ENST00000555628 TNFRSF4P43489 277 aa9.74□□□□□ -0.85
PRKCH-218ENST00000555628 SMTNP53814 917 aa9.74□□□□□ -0.85
PRKCH-218ENST00000555628 BNC1Q01954 994 aa9.74□□□□□ -0.85
PRKCH-218ENST00000555628 GUCY1B3Q02153 619 aa9.74□□□□□ -0.85
PRKCH-218ENST00000555628 RPL6Q02878 288 aaKnown RBP9.74□□□□□ -0.85
PRKCH-218ENST00000555628 GRIK2Q13002 908 aa9.74□□□□□ -0.85
PRKCH-218ENST00000555628 BYSLQ13895 437 aaKnown RBP9.74□□□□□ -0.85
PRKCH-218ENST00000555628 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.74□□□□□ -0.85
PRKCH-218ENST00000555628 TMEM119Q4V9L6 283 aa9.74□□□□□ -0.85
PRKCH-218ENST00000555628 FOXD4L5Q5VV16 416 aaPredicted RBP9.74□□□□□ -0.85
PRKCH-218ENST00000555628 SLC36A4Q6YBV0 504 aa9.74□□□□□ -0.85
PRKCH-218ENST00000555628 OSTM1Q86WC4 334 aa9.74□□□□□ -0.85
PRKCH-218ENST00000555628 METTL23Q86XA0 190 aa9.74□□□□□ -0.85
PRKCH-218ENST00000555628 MARCH9Q86YJ5 346 aa9.74□□□□□ -0.85
PRKCH-218ENST00000555628 THEM5Q8N1Q8 247 aa9.74□□□□□ -0.85
PRKCH-218ENST00000555628 DEFB119Q8N690 84 aa9.74□□□□□ -0.85
PRKCH-218ENST00000555628 SPATA18Q8TC71 538 aa9.74□□□□□ -0.85
PRKCH-218ENST00000555628 ZNF419Q96HQ0 510 aaPredicted RBP9.74□□□□□ -0.85
PRKCH-218ENST00000555628 FUBP3Q96I24 572 aaKnown RBP eCLIP9.74□□□□□ -0.85
PRKCH-218ENST00000555628 HSPA12BQ96MM6 686 aa9.74□□□□□ -0.85
PRKCH-218ENST00000555628 UBL7Q96S82 380 aaPredicted RBP9.74□□□□□ -0.85
PRKCH-218ENST00000555628 PNKPQ96T60 521 aa9.74□□□□□ -0.85
PRKCH-218ENST00000555628 DUSP9Q99956 384 aaKnown RBP9.74□□□□□ -0.85
PRKCH-218ENST00000555628 ACBD6Q9BR61 282 aa9.74□□□□□ -0.85
PRKCH-218ENST00000555628 RNF38Q9H0F5 515 aa9.74□□□□□ -0.85
PRKCH-218ENST00000555628 KCND2Q9NZV8 630 aa9.74□□□□□ -0.85
PRKCH-218ENST00000555628 ANKRD63C9JTQ0 380 aa9.73□□□□□ -0.85
PRKCH-218ENST00000555628 ATXN7O15265 892 aaPredicted RBP9.73□□□□□ -0.85
PRKCH-218ENST00000555628 TRAK2O60296 914 aa9.73□□□□□ -0.85
PRKCH-218ENST00000555628 ZNF883P0CG24 379 aa9.73□□□□□ -0.85
PRKCH-218ENST00000555628 HDCP19113 662 aa9.73□□□□□ -0.85
PRKCH-218ENST00000555628 ACAT1P24752 427 aaKnown RBP9.73□□□□□ -0.85
PRKCH-218ENST00000555628 PRPHP41219 470 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms