RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 IGSF9Q9P2J2 1179 aa6.27□□□□□ -1.41
VRK1-205ENST00000555402 RGS17Q9UGC6 210 aaPredicted RBP6.27□□□□□ -1.41
VRK1-205ENST00000555402 ZMYND8Q9ULU4 1186 aaPredicted RBP6.27□□□□□ -1.41
VRK1-205ENST00000555402 MRPS17Q9Y2R5 130 aaKnown RBP6.27□□□□□ -1.41
VRK1-205ENST00000555402 CDY1Q9Y6F8 540 aa6.27□□□□□ -1.41
VRK1-205ENST00000555402 F5H697 171 aa6.26□□□□□ -1.41
VRK1-205ENST00000555402 ACKR2O00590 384 aa6.26□□□□□ -1.41
VRK1-205ENST00000555402 TRIM38O00635 465 aa6.26□□□□□ -1.41
VRK1-205ENST00000555402 RRP9O43818 475 aaKnown RBP6.26□□□□□ -1.41
VRK1-205ENST00000555402 HOXB6P17509 224 aaKnown RBP6.26□□□□□ -1.41
VRK1-205ENST00000555402 ANXA11P50995 505 aaKnown RBP6.26□□□□□ -1.41
VRK1-205ENST00000555402 PTK2BQ14289 1009 aa6.26□□□□□ -1.41
VRK1-205ENST00000555402 ZIK1Q3SY52 487 aaPredicted RBP6.26□□□□□ -1.41
VRK1-205ENST00000555402 CD300EQ496F6 205 aaPredicted RBP6.26□□□□□ -1.41
VRK1-205ENST00000555402 FAXCQ5TGI0 409 aa6.26□□□□□ -1.41
VRK1-205ENST00000555402 ARL6IP4Q66PJ3 421 aaKnown RBP6.26□□□□□ -1.41
VRK1-205ENST00000555402 FAM71BQ8TC56 605 aa6.26□□□□□ -1.41
VRK1-205ENST00000555402 PRPF18Q99633 342 aaKnown RBP6.26□□□□□ -1.41
VRK1-205ENST00000555402 AIFM2Q9BRQ8 373 aa6.26□□□□□ -1.41
VRK1-205ENST00000555402 FAM83DQ9H4H8 585 aa6.26□□□□□ -1.41
VRK1-205ENST00000555402 DKK4Q9UBT3 224 aa6.26□□□□□ -1.41
VRK1-205ENST00000555402 GTF2A1LQ9UNN4 478 aa6.26□□□□□ -1.41
VRK1-205ENST00000555402 ARHGEF17Q96PE2 2063 aaPredicted RBP6.26□□□□□ -1.41
VRK1-205ENST00000555402 E7ENX8 843 aa6.25□□□□□ -1.41
VRK1-205ENST00000555402 SYT5O00445 386 aa6.25□□□□□ -1.41
VRK1-205ENST00000555402 SRGAP2O75044 1071 aa6.25□□□□□ -1.41
VRK1-205ENST00000555402 TNFRSF6BO95407 300 aa6.25□□□□□ -1.41
VRK1-205ENST00000555402 HSD3B1P14060 373 aa6.25□□□□□ -1.41
VRK1-205ENST00000555402 EGR1P18146 543 aa6.25□□□□□ -1.41
VRK1-205ENST00000555402 SERPINF1P36955 418 aa6.25□□□□□ -1.41
VRK1-205ENST00000555402 NDUFV1P49821 464 aa6.25□□□□□ -1.41
VRK1-205ENST00000555402 DGKEP52429 567 aa6.25□□□□□ -1.41
VRK1-205ENST00000555402 TAP2Q03519 686 aa6.25□□□□□ -1.41
VRK1-205ENST00000555402 MYO1EQ12965 1108 aa6.25□□□□□ -1.41
VRK1-205ENST00000555402 DYRK1AQ13627 763 aa6.25□□□□□ -1.41
VRK1-205ENST00000555402 E2F2Q14209 437 aa6.25□□□□□ -1.41
VRK1-205ENST00000555402 MAPKAPK3Q16644 382 aa6.25□□□□□ -1.41
VRK1-205ENST00000555402 ZNF750Q32MQ0 723 aa6.25□□□□□ -1.41
VRK1-205ENST00000555402 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.25□□□□□ -1.41
VRK1-205ENST00000555402 AKNAD1Q5T1N1 836 aa6.25□□□□□ -1.41
VRK1-205ENST00000555402 ARHGAP40Q5TG30 622 aa6.25□□□□□ -1.41
VRK1-205ENST00000555402 RAP1GAP2Q684P5 730 aa6.25□□□□□ -1.41
VRK1-205ENST00000555402 KIAA0408Q6ZU52 694 aa6.25□□□□□ -1.41
VRK1-205ENST00000555402 GATAD2AQ86YP4 633 aa6.25□□□□□ -1.41
VRK1-205ENST00000555402 CCDC28AQ8IWP9 274 aa6.25□□□□□ -1.41
VRK1-205ENST00000555402 STYXQ8WUJ0 223 aa6.25□□□□□ -1.41
VRK1-205ENST00000555402 SNX19Q92543 992 aa6.25□□□□□ -1.41
VRK1-205ENST00000555402 TMEM125Q96AQ2 219 aa6.25□□□□□ -1.41
VRK1-205ENST00000555402 RNF31Q96EP0 1072 aa6.25□□□□□ -1.41
VRK1-205ENST00000555402 BOD1Q96IK1 185 aa6.25□□□□□ -1.41
VRK1-205ENST00000555402 PTDSS2Q9BVG9 487 aa6.25□□□□□ -1.41
VRK1-205ENST00000555402 IL17RBQ9NRM6 502 aa6.25□□□□□ -1.41
VRK1-205ENST00000555402 DNMT3BQ9UBC3 853 aaKnown RBP6.25□□□□□ -1.41
VRK1-205ENST00000555402 KCNE5Q9UJ90 142 aa6.25□□□□□ -1.41
VRK1-205ENST00000555402 CAPN11Q9UMQ6 739 aa6.25□□□□□ -1.41
VRK1-205ENST00000555402 HPSEQ9Y251 543 aa6.25□□□□□ -1.41
VRK1-205ENST00000555402 PRAMEF33A0A0G2JMD5 474 aa6.24□□□□□ -1.41
VRK1-205ENST00000555402 WIPF3A6NGB9 483 aa6.24□□□□□ -1.41
VRK1-205ENST00000555402 KCNQ3O43525 872 aa6.24□□□□□ -1.41
VRK1-205ENST00000555402 TRIAP1O43715 76 aa6.24□□□□□ -1.41
VRK1-205ENST00000555402 PRAMEF10O60809 474 aa6.24□□□□□ -1.41
VRK1-205ENST00000555402 WDHD1O75717 1129 aaPredicted RBP6.24□□□□□ -1.41
VRK1-205ENST00000555402 DHRS4L1P0CG22 281 aa6.24□□□□□ -1.41
VRK1-205ENST00000555402 KCNA3P22001 575 aa6.24□□□□□ -1.41
VRK1-205ENST00000555402 CD6P30203 668 aa6.24□□□□□ -1.41
VRK1-205ENST00000555402 MAPK9P45984 424 aa6.24□□□□□ -1.41
VRK1-205ENST00000555402 NPTX2P47972 431 aa6.24□□□□□ -1.41
VRK1-205ENST00000555402 RPS7P62081 194 aaKnown RBP6.24□□□□□ -1.41
VRK1-205ENST00000555402 POU5F1BQ06416 359 aa6.24□□□□□ -1.41
VRK1-205ENST00000555402 PPFIA1Q13136 1202 aa6.24□□□□□ -1.41
VRK1-205ENST00000555402 POSTNQ15063 836 aa6.24□□□□□ -1.41
VRK1-205ENST00000555402 TIGD6Q17RP2 521 aa6.24□□□□□ -1.41
VRK1-205ENST00000555402 MRNIPQ6NTE8 343 aa6.24□□□□□ -1.41
VRK1-205ENST00000555402 KRT73Q86Y46 540 aa6.24□□□□□ -1.41
VRK1-205ENST00000555402 ANKRD18AQ8IVF6 992 aa6.24□□□□□ -1.41
VRK1-205ENST00000555402 SLC15A3Q8IY34 581 aa6.24□□□□□ -1.41
VRK1-205ENST00000555402 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.24□□□□□ -1.41
VRK1-205ENST00000555402 DNAJB14Q8TBM8 379 aa6.24□□□□□ -1.41
VRK1-205ENST00000555402 RUBCNQ92622 972 aa6.24□□□□□ -1.41
VRK1-205ENST00000555402 TMEM120AQ9BXJ8 343 aa6.24□□□□□ -1.41
VRK1-205ENST00000555402 ZBTB26Q9HCK0 441 aa6.24□□□□□ -1.41
VRK1-205ENST00000555402 GALNT9Q9HCQ5 603 aa6.24□□□□□ -1.41
VRK1-205ENST00000555402 TMOD4Q9NZQ9 345 aa6.24□□□□□ -1.41
VRK1-205ENST00000555402 NDRG4Q9ULP0 352 aaKnown RBP6.24□□□□□ -1.41
VRK1-205ENST00000555402 GPR52Q9Y2T5 361 aa6.24□□□□□ -1.41
VRK1-205ENST00000555402 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.24□□□□□ -1.41
VRK1-205ENST00000555402 ASNA1O43681 348 aa6.23□□□□□ -1.41
VRK1-205ENST00000555402 CCNT2O60583 730 aaKnown RBP6.23□□□□□ -1.41
VRK1-205ENST00000555402 USP1O94782 785 aa6.23□□□□□ -1.41
VRK1-205ENST00000555402 CELA2AP08217 269 aa6.23□□□□□ -1.41
VRK1-205ENST00000555402 SRGAP2BP0DMP2 458 aa6.23□□□□□ -1.41
VRK1-205ENST00000555402 PECAM1P16284 738 aaPredicted RBP6.23□□□□□ -1.41
VRK1-205ENST00000555402 PRKAR1BP31321 381 aa6.23□□□□□ -1.41
VRK1-205ENST00000555402 CXADRP78310 365 aa6.23□□□□□ -1.41
VRK1-205ENST00000555402 TAF5Q15542 800 aa6.23□□□□□ -1.41
VRK1-205ENST00000555402 GPR162Q16538 588 aa6.23□□□□□ -1.41
VRK1-205ENST00000555402 PTCHD3Q3KNS1 767 aa6.23□□□□□ -1.41
VRK1-205ENST00000555402 ALFQ53S48 1182 aa6.23□□□□□ -1.41
VRK1-205ENST00000555402 RBM20Q5T481 1227 aaKnown RBP6.23□□□□□ -1.41
VRK1-205ENST00000555402 TMTC4Q5T4D3 741 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms