RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 UVRAGQ9P2Y5 699 aa11.31□□□□□ -0.6
TDP1-211ENST00000555178 MAGED2Q9UNF1 606 aaPredicted RBP11.31□□□□□ -0.6
TDP1-211ENST00000555178 CARNS1A5YM72 827 aa11.3□□□□□ -0.6
TDP1-211ENST00000555178 SLC38A8A6NNN8 435 aa11.3□□□□□ -0.6
TDP1-211ENST00000555178 CCL16O15467 120 aa11.3□□□□□ -0.6
TDP1-211ENST00000555178 MTA2O94776 668 aa11.3□□□□□ -0.6
TDP1-211ENST00000555178 GLUD1P00367 558 aa11.3□□□□□ -0.6
TDP1-211ENST00000555178 ADH1AP07327 375 aa11.3□□□□□ -0.6
TDP1-211ENST00000555178 C8AP07357 584 aa11.3□□□□□ -0.6
TDP1-211ENST00000555178 TCF4P15884 667 aa11.3□□□□□ -0.6
TDP1-211ENST00000555178 FLT3P36888 993 aa11.3□□□□□ -0.6
TDP1-211ENST00000555178 SH3PXD2AQ5TCZ1 1133 aa11.3□□□□□ -0.6
TDP1-211ENST00000555178 VSTM1Q6UX27 236 aa11.3□□□□□ -0.6
TDP1-211ENST00000555178 GPR65Q8IYL9 337 aa11.3□□□□□ -0.6
TDP1-211ENST00000555178 TRIM58Q8NG06 486 aa11.3□□□□□ -0.6
TDP1-211ENST00000555178 STK32AQ8WU08 396 aa11.3□□□□□ -0.6
TDP1-211ENST00000555178 KCTD13Q8WZ19 329 aa11.3□□□□□ -0.6
TDP1-211ENST00000555178 ALS2CR12Q96Q35 445 aa11.3□□□□□ -0.6
TDP1-211ENST00000555178 SELENOOQ9BVL4 669 aa11.3□□□□□ -0.6
TDP1-211ENST00000555178 EMILIN2Q9BXX0 1053 aa11.3□□□□□ -0.6
TDP1-211ENST00000555178 TLE6Q9H808 572 aa11.3□□□□□ -0.6
TDP1-211ENST00000555178 STRIP2Q9ULQ0 834 aa11.3□□□□□ -0.6
TDP1-211ENST00000555178 A0A1W2PPC1 479 aa11.29□□□□□ -0.6
TDP1-211ENST00000555178 TMEM191CA6NGB0 347 aa11.29□□□□□ -0.6
TDP1-211ENST00000555178 KRT3P12035 628 aa11.29□□□□□ -0.6
TDP1-211ENST00000555178 CASQ1P31415 396 aa11.29□□□□□ -0.6
TDP1-211ENST00000555178 MARCKSL1P49006 195 aa11.29□□□□□ -0.6
TDP1-211ENST00000555178 GSCP56915 257 aaPredicted RBP11.29□□□□□ -0.6
TDP1-211ENST00000555178 SLC8A3P57103 927 aa11.29□□□□□ -0.6
TDP1-211ENST00000555178 DAOAP59103 153 aa11.29□□□□□ -0.6
TDP1-211ENST00000555178 NTHL1P78549 312 aa11.29□□□□□ -0.6
TDP1-211ENST00000555178 DLX2Q07687 328 aaPredicted RBP11.29□□□□□ -0.6
TDP1-211ENST00000555178 TCEAL1Q15170 157 aa11.29□□□□□ -0.6
TDP1-211ENST00000555178 DUSP6Q16828 381 aa11.29□□□□□ -0.6
TDP1-211ENST00000555178 DCUN1D2Q6PH85 259 aa11.29□□□□□ -0.6
TDP1-211ENST00000555178 TMEM150AQ86TG1 271 aa11.29□□□□□ -0.6
TDP1-211ENST00000555178 EDEM1Q92611 657 aa11.29□□□□□ -0.6
TDP1-211ENST00000555178 HSFY1Q96LI6 401 aa11.29□□□□□ -0.6
TDP1-211ENST00000555178 USP3Q9Y6I4 520 aa11.29□□□□□ -0.6
TDP1-211ENST00000555178 SCINQ9Y6U3 715 aa11.29□□□□□ -0.6
TDP1-211ENST00000555178 SRGAP2O75044 1071 aa11.29□□□□□ -0.6
TDP1-211ENST00000555178 TADA3O75528 432 aa11.29□□□□□ -0.6
TDP1-211ENST00000555178 GJA1P17302 382 aa11.29□□□□□ -0.6
TDP1-211ENST00000555178 COMTP21964 271 aa11.29□□□□□ -0.6
TDP1-211ENST00000555178 CXCR5P32302 372 aa11.29□□□□□ -0.6
TDP1-211ENST00000555178 HADHBP55084 474 aaKnown RBP11.29□□□□□ -0.6
TDP1-211ENST00000555178 SLC6A3Q01959 620 aa11.29□□□□□ -0.6
TDP1-211ENST00000555178 ZNF268Q14587 947 aaPredicted RBP11.29□□□□□ -0.6
TDP1-211ENST00000555178 SYPL2Q5VXT5 272 aa11.29□□□□□ -0.6
TDP1-211ENST00000555178 PPP1R2P3Q6NXS1 205 aa11.29□□□□□ -0.6
TDP1-211ENST00000555178 SLFN11Q7Z7L1 901 aa11.29□□□□□ -0.6
TDP1-211ENST00000555178 NT5DC3Q86UY8 548 aa11.29□□□□□ -0.6
TDP1-211ENST00000555178 NUP93Q8N1F7 819 aa11.29□□□□□ -0.6
TDP1-211ENST00000555178 SIX6OS1Q8N1H7 587 aa11.29□□□□□ -0.6
TDP1-211ENST00000555178 MSANTD4Q8NCY6 345 aa11.29□□□□□ -0.6
TDP1-211ENST00000555178 TLR10Q9BXR5 811 aa11.29□□□□□ -0.6
TDP1-211ENST00000555178 OXCT2Q9BYC2 517 aaPredicted RBP11.29□□□□□ -0.6
TDP1-211ENST00000555178 LRRC4Q9HBW1 653 aa11.29□□□□□ -0.6
TDP1-211ENST00000555178 MRPL47Q9HD33 250 aaKnown RBP11.29□□□□□ -0.6
TDP1-211ENST00000555178 GMIPQ9P107 970 aa11.29□□□□□ -0.6
TDP1-211ENST00000555178 TMEM59LQ9UK28 342 aa11.29□□□□□ -0.6
TDP1-211ENST00000555178 SSX2IPQ9Y2D8 614 aa11.29□□□□□ -0.6
TDP1-211ENST00000555178 ALG6Q9Y672 507 aa11.29□□□□□ -0.6
TDP1-211ENST00000555178 MTCH2Q9Y6C9 303 aa11.29□□□□□ -0.6
TDP1-211ENST00000555178 SIGLEC16A6NMB1 481 aa11.28□□□□□ -0.6
TDP1-211ENST00000555178 CCR2P41597 374 aa11.28□□□□□ -0.6
TDP1-211ENST00000555178 ATXN1P54253 815 aaKnown RBP11.28□□□□□ -0.6
TDP1-211ENST00000555178 MRPS5P82675 430 aaKnown RBP11.28□□□□□ -0.6
TDP1-211ENST00000555178 TAF10Q12962 218 aa11.28□□□□□ -0.6
TDP1-211ENST00000555178 PLD1Q13393 1074 aa11.28□□□□□ -0.6
TDP1-211ENST00000555178 C15orf59Q2T9L4 293 aaPredicted RBP11.28□□□□□ -0.6
TDP1-211ENST00000555178 PM20D1Q6GTS8 502 aa11.28□□□□□ -0.6
TDP1-211ENST00000555178 DNAJB7Q7Z6W7 309 aaPredicted RBP11.28□□□□□ -0.6
TDP1-211ENST00000555178 C2orf15Q8WU43 125 aaKnown RBP11.28□□□□□ -0.6
TDP1-211ENST00000555178 KRT35Q92764 455 aa11.28□□□□□ -0.6
TDP1-211ENST00000555178 CFAP57Q96MR6 1250 aa11.28□□□□□ -0.6
TDP1-211ENST00000555178 NAPGQ99747 312 aaPredicted RBP11.28□□□□□ -0.6
TDP1-211ENST00000555178 LRRC3Q9BY71 257 aa11.28□□□□□ -0.6
TDP1-211ENST00000555178 IL37Q9NZH6 218 aa11.28□□□□□ -0.6
TDP1-211ENST00000555178 NAALADL1Q9UQQ1 740 aa11.28□□□□□ -0.6
TDP1-211ENST00000555178 USTQ9Y2C2 406 aa11.28□□□□□ -0.6
TDP1-211ENST00000555178 A0A1W2PQH9 124 aa11.28□□□□□ -0.6
TDP1-211ENST00000555178 CTAGE9A4FU28 777 aa11.28□□□□□ -0.6
TDP1-211ENST00000555178 MYO1FO00160 1098 aa11.28□□□□□ -0.6
TDP1-211ENST00000555178 MDM4O15151 490 aa11.28□□□□□ -0.6
TDP1-211ENST00000555178 ZNF185O15231 689 aa11.28□□□□□ -0.6
TDP1-211ENST00000555178 TBX18O95935 607 aa11.28□□□□□ -0.6
TDP1-211ENST00000555178 ZBED1O96006 694 aa11.28□□□□□ -0.6
TDP1-211ENST00000555178 ELF1P32519 619 aa11.28□□□□□ -0.6
TDP1-211ENST00000555178 CDO1Q16878 200 aa11.28□□□□□ -0.6
TDP1-211ENST00000555178 MEI1Q5TIA1 1274 aa11.28□□□□□ -0.6
TDP1-211ENST00000555178 OTUD1Q5VV17 481 aaPredicted RBP11.28□□□□□ -0.6
TDP1-211ENST00000555178 C11orf63Q6NUN7 778 aa11.28□□□□□ -0.6
TDP1-211ENST00000555178 DENND5BQ6ZUT9 1274 aa11.28□□□□□ -0.6
TDP1-211ENST00000555178 PEX26Q7Z412 305 aa11.28□□□□□ -0.6
TDP1-211ENST00000555178 ARFGAP1Q8N6T3 406 aa11.28□□□□□ -0.6
TDP1-211ENST00000555178 ADAM32Q8TC27 787 aa11.28□□□□□ -0.6
TDP1-211ENST00000555178 FAM149B1Q96BN6 582 aa11.28□□□□□ -0.6
TDP1-211ENST00000555178 ZNF707Q96C28 371 aaPredicted RBP11.28□□□□□ -0.6
TDP1-211ENST00000555178 TCEAL4Q96EI5 215 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms