RNA–Protein interactions for RNA: ENST00000554975.5

SHMT2-216, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-216ENST00000554975 SLC27A1Q6PCB7 646 aa11.77□□□□□ -0.53
SHMT2-216ENST00000554975 CEP68Q76N32 757 aa11.77□□□□□ -0.53
SHMT2-216ENST00000554975 SPEM1Q8N4L4 309 aa11.77□□□□□ -0.53
SHMT2-216ENST00000554975 ACTRT1Q8TDG2 376 aa11.77□□□□□ -0.53
SHMT2-216ENST00000554975 WHAMMQ8TF30 809 aa11.77□□□□□ -0.53
SHMT2-216ENST00000554975 AENQ8WTP8 325 aaKnown RBP11.77□□□□□ -0.53
SHMT2-216ENST00000554975 ASB16Q96NS5 453 aa11.77□□□□□ -0.53
SHMT2-216ENST00000554975 TRMT61BQ9BVS5 477 aaKnown RBP11.77□□□□□ -0.53
SHMT2-216ENST00000554975 SLITRK6Q9H5Y7 841 aa11.77□□□□□ -0.53
SHMT2-216ENST00000554975 ZFP14Q9HCL3 533 aa11.77□□□□□ -0.53
SHMT2-216ENST00000554975 PDE11AQ9HCR9 933 aa11.77□□□□□ -0.53
SHMT2-216ENST00000554975 HSPBP1Q9NZL4 362 aa11.77□□□□□ -0.53
SHMT2-216ENST00000554975 MTRRQ9UBK8 725 aa11.77□□□□□ -0.53
SHMT2-216ENST00000554975 PARP2Q9UGN5 583 aa11.77□□□□□ -0.53
SHMT2-216ENST00000554975 AMFRQ9UKV5 643 aa11.77□□□□□ -0.53
SHMT2-216ENST00000554975 HPCAL4Q9UM19 191 aa11.77□□□□□ -0.53
SHMT2-216ENST00000554975 CDY1Q9Y6F8 540 aa11.77□□□□□ -0.53
SHMT2-216ENST00000554975 ADAMTS20P59510 1910 aa11.77□□□□□ -0.53
SHMT2-216ENST00000554975 ANKRD62A6NC57 917 aa11.76□□□□□ -0.53
SHMT2-216ENST00000554975 SRRM3A6NNA2 597 aaPredicted RBP11.76□□□□□ -0.53
SHMT2-216ENST00000554975 TTLL13PA6NNM8 815 aa11.76□□□□□ -0.53
SHMT2-216ENST00000554975 SFI1A8K8P3 1242 aa11.76□□□□□ -0.53
SHMT2-216ENST00000554975 K7ERI5 159 aa11.76□□□□□ -0.53
SHMT2-216ENST00000554975 ZNF185O15231 689 aa11.76□□□□□ -0.53
SHMT2-216ENST00000554975 MOSPD3O75425 235 aa11.76□□□□□ -0.53
SHMT2-216ENST00000554975 EPN2O95208 641 aa11.76□□□□□ -0.53
SHMT2-216ENST00000554975 PAPSS2O95340 614 aaPredicted RBP11.76□□□□□ -0.53
SHMT2-216ENST00000554975 TNFAIP3P21580 790 aa11.76□□□□□ -0.53
SHMT2-216ENST00000554975 GARTP22102 1010 aa11.76□□□□□ -0.53
SHMT2-216ENST00000554975 FGFR3P22607 806 aa11.76□□□□□ -0.53
SHMT2-216ENST00000554975 CNR2P34972 360 aa11.76□□□□□ -0.53
SHMT2-216ENST00000554975 VIPR2P41587 438 aa11.76□□□□□ -0.53
SHMT2-216ENST00000554975 EFNA5P52803 228 aa11.76□□□□□ -0.53
SHMT2-216ENST00000554975 KCNA1Q09470 495 aa11.76□□□□□ -0.53
SHMT2-216ENST00000554975 CUL1Q13616 776 aa11.76□□□□□ -0.53
SHMT2-216ENST00000554975 ENOX2Q16206 610 aaKnown RBP11.76□□□□□ -0.53
SHMT2-216ENST00000554975 ALS2CLQ60I27 953 aa11.76□□□□□ -0.53
SHMT2-216ENST00000554975 TCEAL6Q6IPX3 200 aa11.76□□□□□ -0.53
SHMT2-216ENST00000554975 C11orf63Q6NUN7 778 aa11.76□□□□□ -0.53
SHMT2-216ENST00000554975 TXNDC11Q6PKC3 985 aa11.76□□□□□ -0.53
SHMT2-216ENST00000554975 CD300LGQ6UXG3 332 aa11.76□□□□□ -0.53
SHMT2-216ENST00000554975 CCNI2Q6ZMN8 369 aaPredicted RBP11.76□□□□□ -0.53
SHMT2-216ENST00000554975 SLFN11Q7Z7L1 901 aa11.76□□□□□ -0.53
SHMT2-216ENST00000554975 LRRC57Q8N9N7 239 aa11.76□□□□□ -0.53
SHMT2-216ENST00000554975 C12orf50Q8NA57 414 aaPredicted RBP11.76□□□□□ -0.53
SHMT2-216ENST00000554975 TPCN2Q8NHX9 752 aa11.76□□□□□ -0.53
SHMT2-216ENST00000554975 IRF7Q92985 503 aa11.76□□□□□ -0.53
SHMT2-216ENST00000554975 TCEAL3Q969E4 200 aa11.76□□□□□ -0.53
SHMT2-216ENST00000554975 RSPRY1Q96DX4 576 aa11.76□□□□□ -0.53
SHMT2-216ENST00000554975 CORO1BQ9BR76 489 aa11.76□□□□□ -0.53
SHMT2-216ENST00000554975 ADPGKQ9BRR6 497 aa11.76□□□□□ -0.53
SHMT2-216ENST00000554975 FZD8Q9H461 694 aa11.76□□□□□ -0.53
SHMT2-216ENST00000554975 TRPV5Q9NQA5 729 aa11.76□□□□□ -0.53
SHMT2-216ENST00000554975 KMT5AQ9NQR1 393 aa11.76□□□□□ -0.53
SHMT2-216ENST00000554975 AVENQ9NQS1 362 aaPredicted RBP11.76□□□□□ -0.53
SHMT2-216ENST00000554975 CWC15Q9P013 229 aaKnown RBP11.76□□□□□ -0.53
SHMT2-216ENST00000554975 CALCOCO1Q9P1Z2 691 aa11.76□□□□□ -0.53
SHMT2-216ENST00000554975 THADAQ6YHU6 1953 aa11.76□□□□□ -0.53
SHMT2-216ENST00000554975 KIAA1549LQ6ZVL6 1849 aa11.75□□□□□ -0.53
SHMT2-216ENST00000554975 A0A1B0GUA9 196 aa11.75□□□□□ -0.53
SHMT2-216ENST00000554975 WDR27A2RRH5 827 aa11.75□□□□□ -0.53
SHMT2-216ENST00000554975 GOLGA6BA6NDN3 693 aa11.75□□□□□ -0.53
SHMT2-216ENST00000554975 TMCO5BA8MYB1 307 aa11.75□□□□□ -0.53
SHMT2-216ENST00000554975 GOLGA8KD6RF30 607 aa11.75□□□□□ -0.53
SHMT2-216ENST00000554975 I3L4J1 428 aa11.75□□□□□ -0.53
SHMT2-216ENST00000554975 DDX3XO00571 662 aaKnown RBP eCLIP11.75□□□□□ -0.531e-14■■□□□ 13.5
SHMT2-216ENST00000554975 ACKR2O00590 384 aa11.75□□□□□ -0.53
SHMT2-216ENST00000554975 POLR3GO15318 223 aaPredicted RBP11.75□□□□□ -0.53
SHMT2-216ENST00000554975 FOXD2O60548 495 aaPredicted RBP11.75□□□□□ -0.53
SHMT2-216ENST00000554975 HSF2BPO75031 334 aa11.75□□□□□ -0.53
SHMT2-216ENST00000554975 FTCDO95954 541 aa11.75□□□□□ -0.53
SHMT2-216ENST00000554975 TRIM49P0CI25 452 aa11.75□□□□□ -0.53
SHMT2-216ENST00000554975 TRIM49CP0CI26 452 aa11.75□□□□□ -0.53
SHMT2-216ENST00000554975 GJA1P17302 382 aa11.75□□□□□ -0.53
SHMT2-216ENST00000554975 PSMC3P17980 439 aa11.75□□□□□ -0.53
SHMT2-216ENST00000554975 TKTP29401 623 aaKnown RBP11.75□□□□□ -0.53
SHMT2-216ENST00000554975 GBP1P32455 592 aa11.75□□□□□ -0.53
SHMT2-216ENST00000554975 MFAP3P55082 362 aa11.75□□□□□ -0.53
SHMT2-216ENST00000554975 RING1Q06587 406 aa11.75□□□□□ -0.53
SHMT2-216ENST00000554975 FOXC1Q12948 553 aa11.75□□□□□ -0.53
SHMT2-216ENST00000554975 FAM187BQ17R55 369 aa11.75□□□□□ -0.53
SHMT2-216ENST00000554975 CBWD6Q4V339 395 aa11.75□□□□□ -0.53
SHMT2-216ENST00000554975 CBWD3Q5JTY5 395 aa11.75□□□□□ -0.53
SHMT2-216ENST00000554975 PLA2G2CQ5R387 149 aa11.75□□□□□ -0.53
SHMT2-216ENST00000554975 CBWD5Q5RIA9 395 aa11.75□□□□□ -0.53
SHMT2-216ENST00000554975 KRT39Q6A163 491 aa11.75□□□□□ -0.53
SHMT2-216ENST00000554975 PKN3Q6P5Z2 889 aa11.75□□□□□ -0.53
SHMT2-216ENST00000554975 LEKR1Q6ZMV7 388 aa11.75□□□□□ -0.53
SHMT2-216ENST00000554975 KBTBD6Q86V97 674 aa11.75□□□□□ -0.53
SHMT2-216ENST00000554975 WDR5BQ86VZ2 330 aa11.75□□□□□ -0.53
SHMT2-216ENST00000554975 HS6ST3Q8IZP7 471 aa11.75□□□□□ -0.53
SHMT2-216ENST00000554975 MREGQ8N565 214 aa11.75□□□□□ -0.53
SHMT2-216ENST00000554975 COL26A1Q96A83 441 aa11.75□□□□□ -0.53
SHMT2-216ENST00000554975 DDX27Q96GQ7 796 aaKnown RBP11.75□□□□□ -0.53
SHMT2-216ENST00000554975 RUNDC3BQ96NL0 473 aa11.75□□□□□ -0.53
SHMT2-216ENST00000554975 NT5C1BQ96P26 610 aa11.75□□□□□ -0.53
SHMT2-216ENST00000554975 SYT11Q9BT88 431 aa11.75□□□□□ -0.53
SHMT2-216ENST00000554975 CARD9Q9H257 536 aa11.75□□□□□ -0.53
SHMT2-216ENST00000554975 PDZD7Q9H5P4 517 aa11.75□□□□□ -0.53
SHMT2-216ENST00000554975 TMEM8AQ9HCN3 771 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms