RNA–Protein interactions for RNA: ENST00000554508.5

ACTN1-213, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-213ENST00000554508 TTI2Q6NXR4 508 aa9.21□□□□□ -0.94
ACTN1-213ENST00000554508 LONP2Q86WA8 852 aa9.21□□□□□ -0.94
ACTN1-213ENST00000554508 ZNF276Q8N554 614 aa9.21□□□□□ -0.94
ACTN1-213ENST00000554508 TRIML1Q8N9V2 468 aa9.21□□□□□ -0.94
ACTN1-213ENST00000554508 NELFBQ8WX92 580 aa9.21□□□□□ -0.94
ACTN1-213ENST00000554508 SECISBP2LQ93073 1101 aaKnown RBP9.21□□□□□ -0.94
ACTN1-213ENST00000554508 SLC35C1Q96A29 364 aa9.21□□□□□ -0.94
ACTN1-213ENST00000554508 NACA2Q9H009 215 aa9.21□□□□□ -0.94
ACTN1-213ENST00000554508 CCSER2Q9H7U1 834 aa9.21□□□□□ -0.94
ACTN1-213ENST00000554508 FBRSL1Q9HCM7 1045 aaKnown RBP9.21□□□□□ -0.94
ACTN1-213ENST00000554508 SMPD4Q9NXE4 827 aa9.21□□□□□ -0.94
ACTN1-213ENST00000554508 GMIPQ9P107 970 aa9.21□□□□□ -0.94
ACTN1-213ENST00000554508 CFAP97Q9P2B7 532 aa9.21□□□□□ -0.94
ACTN1-213ENST00000554508 SH3BP1Q9Y3L3 701 aa9.21□□□□□ -0.94
ACTN1-213ENST00000554508 BIN1O00499 593 aa9.2□□□□□ -0.94
ACTN1-213ENST00000554508 RNF40O75150 1001 aa9.2□□□□□ -0.94
ACTN1-213ENST00000554508 FGFR1OPO95684 399 aaKnown RBP9.2□□□□□ -0.94
ACTN1-213ENST00000554508 MBD3O95983 291 aa9.2□□□□□ -0.94
ACTN1-213ENST00000554508 ADH1CP00326 375 aa9.2□□□□□ -0.94
ACTN1-213ENST00000554508 BMP6P22004 513 aa9.2□□□□□ -0.94
ACTN1-213ENST00000554508 EIF2DP41214 584 aaKnown RBP9.2□□□□□ -0.94
ACTN1-213ENST00000554508 KIF11P52732 1056 aa9.2□□□□□ -0.94
ACTN1-213ENST00000554508 RAD23BP54727 409 aa9.2□□□□□ -0.94
ACTN1-213ENST00000554508 MARSP56192 900 aaKnown RBP9.2□□□□□ -0.94
ACTN1-213ENST00000554508 SLC8A3P57103 927 aa9.2□□□□□ -0.94
ACTN1-213ENST00000554508 GOLGA8FQ08AF8 430 aa9.2□□□□□ -0.94
ACTN1-213ENST00000554508 GOLGA8DPQ0D2H9 430 aa9.2□□□□□ -0.94
ACTN1-213ENST00000554508 DHCR24Q15392 516 aa9.2□□□□□ -0.94
ACTN1-213ENST00000554508 CCDC40Q4G0X9 1142 aa9.2□□□□□ -0.94
ACTN1-213ENST00000554508 ARHGAP17Q68EM7 881 aa9.2□□□□□ -0.94
ACTN1-213ENST00000554508 KLHL10Q6JEL2 608 aa9.2□□□□□ -0.94
ACTN1-213ENST00000554508 KLHDC10Q6PID8 442 aa9.2□□□□□ -0.94
ACTN1-213ENST00000554508 RHBDF2Q6PJF5 856 aa9.2□□□□□ -0.94
ACTN1-213ENST00000554508 CCDC186Q7Z3E2 898 aa9.2□□□□□ -0.94
ACTN1-213ENST00000554508 CAMKK1Q8N5S9 505 aa9.2□□□□□ -0.94
ACTN1-213ENST00000554508 GPR161Q8N6U8 529 aaKnown RBP9.2□□□□□ -0.94
ACTN1-213ENST00000554508 ANKRD52Q8NB46 1076 aa9.2□□□□□ -0.94
ACTN1-213ENST00000554508 SLC4A11Q8NBS3 891 aa9.2□□□□□ -0.94
ACTN1-213ENST00000554508 GPT2Q8TD30 523 aa9.2□□□□□ -0.94
ACTN1-213ENST00000554508 ZFRQ96KR1 1074 aaKnown RBP9.2□□□□□ -0.94
ACTN1-213ENST00000554508 HINFPQ9BQA5 517 aa9.2□□□□□ -0.94
ACTN1-213ENST00000554508 NUP62CLQ9H1M0 184 aa9.2□□□□□ -0.94
ACTN1-213ENST00000554508 CYLDQ9NQC7 956 aa9.2□□□□□ -0.94
ACTN1-213ENST00000554508 KIAA1468Q9P260 1216 aa9.2□□□□□ -0.94
ACTN1-213ENST00000554508 RAB23Q9ULC3 237 aa9.2□□□□□ -0.94
ACTN1-213ENST00000554508 KIAA1257Q9ULG3 409 aa9.2□□□□□ -0.94
ACTN1-213ENST00000554508 SLC8A2Q9UPR5 921 aa9.2□□□□□ -0.94
ACTN1-213ENST00000554508 USP3Q9Y6I4 520 aa9.2□□□□□ -0.94
ACTN1-213ENST00000554508 SPTBN4Q9H254 2564 aa9.2□□□□□ -0.94
ACTN1-213ENST00000554508 SDK1Q7Z5N4 2213 aa9.2□□□□□ -0.94
ACTN1-213ENST00000554508 GPR179Q6PRD1 2367 aa9.19□□□□□ -0.94
ACTN1-213ENST00000554508 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.19□□□□□ -0.94
ACTN1-213ENST00000554508 CYP17A1P05093 508 aa9.19□□□□□ -0.94
ACTN1-213ENST00000554508 RALAP11233 206 aa9.19□□□□□ -0.94
ACTN1-213ENST00000554508 VDRP11473 427 aa9.19□□□□□ -0.94
ACTN1-213ENST00000554508 RARGP13631 454 aa9.19□□□□□ -0.94
ACTN1-213ENST00000554508 PTMSP20962 102 aa9.19□□□□□ -0.94
ACTN1-213ENST00000554508 OPRD1P41143 372 aa9.19□□□□□ -0.94
ACTN1-213ENST00000554508 PLA2G4AP47712 749 aa9.19□□□□□ -0.94
ACTN1-213ENST00000554508 FNTBP49356 437 aa9.19□□□□□ -0.94
ACTN1-213ENST00000554508 GAD2Q05329 585 aa9.19□□□□□ -0.94
ACTN1-213ENST00000554508 PAK1Q13153 545 aa9.19□□□□□ -0.94
ACTN1-213ENST00000554508 PREPLQ4J6C6 727 aaPredicted RBP9.19□□□□□ -0.94
ACTN1-213ENST00000554508 SGO2Q562F6 1265 aa9.19□□□□□ -0.94
ACTN1-213ENST00000554508 HTR3DQ70Z44 454 aa9.19□□□□□ -0.94
ACTN1-213ENST00000554508 SYT13Q7L8C5 426 aa9.19□□□□□ -0.94
ACTN1-213ENST00000554508 GPRIN1Q7Z2K8 1008 aa9.19□□□□□ -0.94
ACTN1-213ENST00000554508 TADA2BQ86TJ2 420 aa9.19□□□□□ -0.94
ACTN1-213ENST00000554508 WDR5BQ86VZ2 330 aa9.19□□□□□ -0.94
ACTN1-213ENST00000554508 ARHGAP18Q8N392 663 aa9.19□□□□□ -0.94
ACTN1-213ENST00000554508 EHBP1Q8NDI1 1231 aa9.19□□□□□ -0.94
ACTN1-213ENST00000554508 JAKMIP2Q96AA8 810 aa9.19□□□□□ -0.94
ACTN1-213ENST00000554508 ACDQ96AP0 544 aa9.19□□□□□ -0.94
ACTN1-213ENST00000554508 NT5C1BQ96P26 610 aa9.19□□□□□ -0.94
ACTN1-213ENST00000554508 CDK5RAP1Q96SZ6 601 aaKnown RBP9.19□□□□□ -0.94
ACTN1-213ENST00000554508 PNKPQ96T60 521 aa9.19□□□□□ -0.94
ACTN1-213ENST00000554508 ARID3AQ99856 593 aa9.19□□□□□ -0.94
ACTN1-213ENST00000554508 KLF16Q9BXK1 252 aaPredicted RBP9.19□□□□□ -0.94
ACTN1-213ENST00000554508 SRRTQ9BXP5 876 aaKnown RBP9.19□□□□□ -0.94
ACTN1-213ENST00000554508 CLSTN2Q9H4D0 955 aa9.19□□□□□ -0.94
ACTN1-213ENST00000554508 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.19□□□□□ -0.94
ACTN1-213ENST00000554508 CLIC5Q9NZA1 410 aa9.19□□□□□ -0.94
ACTN1-213ENST00000554508 NCDNQ9UBB6 729 aa9.19□□□□□ -0.94
ACTN1-213ENST00000554508 HESX1Q9UBX0 185 aa9.19□□□□□ -0.94
ACTN1-213ENST00000554508 SMG5Q9UPR3 1016 aaKnown RBP9.19□□□□□ -0.94
ACTN1-213ENST00000554508 CTNND2Q9UQB3 1225 aa9.19□□□□□ -0.94
ACTN1-213ENST00000554508 ZNF292O60281 2723 aa9.19□□□□□ -0.94
ACTN1-213ENST00000554508 CFAP54Q96N23 3096 aa9.19□□□□□ -0.94
ACTN1-213ENST00000554508 A0A0A0MRY4 1105 aa9.18□□□□□ -0.94
ACTN1-213ENST00000554508 A0A1W2PQH9 124 aa9.18□□□□□ -0.94
ACTN1-213ENST00000554508 K7EQS6 105 aa9.18□□□□□ -0.94
ACTN1-213ENST00000554508 CYP26A1O43174 497 aa9.18□□□□□ -0.94
ACTN1-213ENST00000554508 TBX18O95935 607 aa9.18□□□□□ -0.94
ACTN1-213ENST00000554508 APODP05090 189 aa9.18□□□□□ -0.94
ACTN1-213ENST00000554508 PAEPP09466 180 aa9.18□□□□□ -0.94
ACTN1-213ENST00000554508 CCDC192P0DO97 292 aa9.18□□□□□ -0.94
ACTN1-213ENST00000554508 ADH5P11766 374 aa9.18□□□□□ -0.94
ACTN1-213ENST00000554508 PGFP49763 221 aa9.18□□□□□ -0.94
ACTN1-213ENST00000554508 STX17P56962 302 aa9.18□□□□□ -0.94
ACTN1-213ENST00000554508 MRPS21P82921 87 aaKnown RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms