RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 TTC30AQ86WT1 665 aa5.76□□□□□ -1.49
SCFD1-209ENST00000553280 MAPKAPK5Q8IW41 473 aa5.76□□□□□ -1.49
SCFD1-209ENST00000553280 FAM109AQ8N4B1 249 aa5.76□□□□□ -1.49
SCFD1-209ENST00000553280 PCYOX1LQ8NBM8 494 aa5.76□□□□□ -1.49
SCFD1-209ENST00000553280 HTRA1Q92743 480 aa5.76□□□□□ -1.49
SCFD1-209ENST00000553280 HDAC2Q92769 488 aaKnown RBP5.76□□□□□ -1.49
SCFD1-209ENST00000553280 ZBTB45Q96K62 511 aaPredicted RBP5.76□□□□□ -1.49
SCFD1-209ENST00000553280 WDR24Q96S15 920 aa5.76□□□□□ -1.49
SCFD1-209ENST00000553280 OSBPL9Q96SU4 736 aa5.76□□□□□ -1.49
SCFD1-209ENST00000553280 TTPALQ9BTX7 342 aa5.76□□□□□ -1.49
SCFD1-209ENST00000553280 GPR87Q9BY21 358 aa5.76□□□□□ -1.49
SCFD1-209ENST00000553280 G6PC2Q9NQR9 355 aa5.76□□□□□ -1.49
SCFD1-209ENST00000553280 FSCN3Q9NQT6 498 aa5.76□□□□□ -1.49
SCFD1-209ENST00000553280 TMEM160Q9NX00 188 aa5.76□□□□□ -1.49
SCFD1-209ENST00000553280 RNF181Q9P0P0 153 aa5.76□□□□□ -1.49
SCFD1-209ENST00000553280 USP22Q9UPT9 525 aa5.76□□□□□ -1.49
SCFD1-209ENST00000553280 TSC22D4Q9Y3Q8 395 aa5.76□□□□□ -1.49
SCFD1-209ENST00000553280 CHST2Q9Y4C5 530 aa5.76□□□□□ -1.49
SCFD1-209ENST00000553280 COL15A1P39059 1388 aa5.76□□□□□ -1.49
SCFD1-209ENST00000553280 B4E171 279 aa5.75□□□□□ -1.49
SCFD1-209ENST00000553280 ERN1O75460 977 aaKnown RBP5.75□□□□□ -1.49
SCFD1-209ENST00000553280 LDHCP07864 332 aa5.75□□□□□ -1.49
SCFD1-209ENST00000553280 ELANEP08246 267 aa5.75□□□□□ -1.49
SCFD1-209ENST00000553280 EPHA3P29320 983 aa5.75□□□□□ -1.49
SCFD1-209ENST00000553280 CD6P30203 668 aa5.75□□□□□ -1.49
SCFD1-209ENST00000553280 NTSR1P30989 418 aa5.75□□□□□ -1.49
SCFD1-209ENST00000553280 KRT9P35527 623 aa5.75□□□□□ -1.49
SCFD1-209ENST00000553280 TSPAN7P41732 249 aa5.75□□□□□ -1.49
SCFD1-209ENST00000553280 SELENOPP49908 381 aa5.75□□□□□ -1.49
SCFD1-209ENST00000553280 TIAL1Q01085 375 aaKnown RBP eCLIP5.75□□□□□ -1.49
SCFD1-209ENST00000553280 FPGSQ05932 587 aa5.75□□□□□ -1.49
SCFD1-209ENST00000553280 CHRNDQ07001 517 aa5.75□□□□□ -1.49
SCFD1-209ENST00000553280 MAPK7Q13164 816 aa5.75□□□□□ -1.49
SCFD1-209ENST00000553280 BTBD16Q32M84 506 aa5.75□□□□□ -1.49
SCFD1-209ENST00000553280 PDCD4Q53EL6 469 aaKnown RBP5.75□□□□□ -1.49
SCFD1-209ENST00000553280 RBM20Q5T481 1227 aaKnown RBP5.75□□□□□ -1.49
SCFD1-209ENST00000553280 VPS53Q5VIR6 699 aa5.75□□□□□ -1.49
SCFD1-209ENST00000553280 FAM180BQ6P0A1 224 aa5.75□□□□□ -1.49
SCFD1-209ENST00000553280 LRRC55Q6ZSA7 311 aa5.75□□□□□ -1.49
SCFD1-209ENST00000553280 HEATR4Q86WZ0 1026 aa5.75□□□□□ -1.49
SCFD1-209ENST00000553280 ADGRG5Q8IZF4 528 aa5.75□□□□□ -1.49
SCFD1-209ENST00000553280 TMEM132CQ8N3T6 1108 aa5.75□□□□□ -1.49
SCFD1-209ENST00000553280 TMEM57Q8N5G2 664 aa5.75□□□□□ -1.49
SCFD1-209ENST00000553280 TSPYL6Q8N831 410 aa5.75□□□□□ -1.49
SCFD1-209ENST00000553280 SUN3Q8TAQ9 357 aa5.75□□□□□ -1.49
SCFD1-209ENST00000553280 TMEM171Q8WVE6 324 aa5.75□□□□□ -1.49
SCFD1-209ENST00000553280 C3orf49Q96BT1 292 aa5.75□□□□□ -1.49
SCFD1-209ENST00000553280 CDK5RAP1Q96SZ6 601 aaKnown RBP5.75□□□□□ -1.49
SCFD1-209ENST00000553280 INO80BQ9C086 356 aaPredicted RBP5.75□□□□□ -1.49
SCFD1-209ENST00000553280 BRD8Q9H0E9 1235 aa5.75□□□□□ -1.49
SCFD1-209ENST00000553280 ELAC1Q9H777 363 aaKnown RBP5.75□□□□□ -1.49
SCFD1-209ENST00000553280 JMJD4Q9H9V9 463 aa5.75□□□□□ -1.49
SCFD1-209ENST00000553280 PI4KBQ9UBF8 816 aa5.75□□□□□ -1.49
SCFD1-209ENST00000553280 EIF2B4Q9UI10 523 aaKnown RBP5.75□□□□□ -1.49
SCFD1-209ENST00000553280 KCNE5Q9UJ90 142 aa5.75□□□□□ -1.49
SCFD1-209ENST00000553280 CNTN6Q9UQ52 1028 aa5.75□□□□□ -1.49
SCFD1-209ENST00000553280 XDHP47989 1333 aa5.74□□□□□ -1.49
SCFD1-209ENST00000553280 CCDC196A0A1B0GTZ2 297 aa5.74□□□□□ -1.49
SCFD1-209ENST00000553280 MYADML2A6NDP7 307 aa5.74□□□□□ -1.49
SCFD1-209ENST00000553280 CAPN14A8MX76 684 aa5.74□□□□□ -1.49
SCFD1-209ENST00000553280 E7EVH7 732 aa5.74□□□□□ -1.49
SCFD1-209ENST00000553280 AGPSO00116 658 aa5.74□□□□□ -1.49
SCFD1-209ENST00000553280 MUSKO15146 869 aa5.74□□□□□ -1.49
SCFD1-209ENST00000553280 CYP27B1O15528 508 aa5.74□□□□□ -1.49
SCFD1-209ENST00000553280 CBFA2T3O75081 653 aa5.74□□□□□ -1.49
SCFD1-209ENST00000553280 FSHBP01225 129 aa5.74□□□□□ -1.49
SCFD1-209ENST00000553280 CAPN3P20807 821 aa5.74□□□□□ -1.49
SCFD1-209ENST00000553280 RBL1P28749 1068 aa5.74□□□□□ -1.49
SCFD1-209ENST00000553280 AKT1P31749 480 aa5.74□□□□□ -1.49
SCFD1-209ENST00000553280 LIFRP42702 1097 aa5.74□□□□□ -1.49
SCFD1-209ENST00000553280 MAN2A2P49641 1150 aa5.74□□□□□ -1.49
SCFD1-209ENST00000553280 PDE6CP51160 858 aa5.74□□□□□ -1.49
SCFD1-209ENST00000553280 NR1H2P55055 460 aa5.74□□□□□ -1.49
SCFD1-209ENST00000553280 TUBB3Q13509 450 aa5.74□□□□□ -1.49
SCFD1-209ENST00000553280 SLC12A1Q13621 1099 aa5.74□□□□□ -1.49
SCFD1-209ENST00000553280 CSHL1Q14406 222 aa5.74□□□□□ -1.49
SCFD1-209ENST00000553280 DLGAP5Q15398 846 aa5.74□□□□□ -1.49
SCFD1-209ENST00000553280 SMAD1Q15797 465 aaKnown RBP5.74□□□□□ -1.49
SCFD1-209ENST00000553280 CD300EQ496F6 205 aaPredicted RBP5.74□□□□□ -1.49
SCFD1-209ENST00000553280 SPDYAQ5MJ70 313 aa5.74□□□□□ -1.49
SCFD1-209ENST00000553280 MAP3K21Q5TCX8 1036 aa5.74□□□□□ -1.49
SCFD1-209ENST00000553280 B3GNTL1Q67FW5 361 aaPredicted RBP5.74□□□□□ -1.49
SCFD1-209ENST00000553280 MZT2BQ6NZ67 158 aa5.74□□□□□ -1.49
SCFD1-209ENST00000553280 MAMDC4Q6UXC1 1216 aa5.74□□□□□ -1.49
SCFD1-209ENST00000553280 Q6ZSN1 163 aa5.74□□□□□ -1.49
SCFD1-209ENST00000553280 BBS12Q6ZW61 710 aa5.74□□□□□ -1.49
SCFD1-209ENST00000553280 ABRAQ8N0Z2 381 aa5.74□□□□□ -1.49
SCFD1-209ENST00000553280 CPT1BQ92523 772 aa5.74□□□□□ -1.49
SCFD1-209ENST00000553280 SNX19Q92543 992 aa5.74□□□□□ -1.49
SCFD1-209ENST00000553280 HVCN1Q96D96 273 aa5.74□□□□□ -1.49
SCFD1-209ENST00000553280 TWNKQ96RR1 684 aa5.74□□□□□ -1.49
SCFD1-209ENST00000553280 AMBRA1Q9C0C7 1298 aa5.74□□□□□ -1.49
SCFD1-209ENST00000553280 SMC4Q9NTJ3 1288 aa5.74□□□□□ -1.49
SCFD1-209ENST00000553280 NDUFAF4Q9P032 175 aa5.74□□□□□ -1.49
SCFD1-209ENST00000553280 FBXO2Q9UK22 296 aaPredicted RBP5.74□□□□□ -1.49
SCFD1-209ENST00000553280 NFU1Q9UMS0 254 aa5.74□□□□□ -1.49
SCFD1-209ENST00000553280 FPGT-TNNI3KV9GXZ4 949 aa5.74□□□□□ -1.49
SCFD1-209ENST00000553280 LMTK3Q96Q04 1460 aa5.73□□□□□ -1.49
SCFD1-209ENST00000553280 TRIM24O15164 1050 aa5.73□□□□□ -1.49
SCFD1-209ENST00000553280 AKAP8O43823 692 aaKnown RBP5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms